Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013499 Daucus carota HOM05D001437 ORTHO05D001297 4.7e-302 1040.4 533 100.0
Dinv37037 Davidia involucrata HOM05D001437 ORTHO05D001297 7.4e-106 388.7 578 46.4
Hma1.2p1_1215F.1_g267620 Hydrangea macrophylla HOM05D001437 ORTHO05D001297 2.7e-87 327.0 574 41.3
Hma1.2p1_0165F.1_g073400 Hydrangea macrophylla HOM05D001437 ORTHO05D001297 5.9e-87 325.9 574 41.1
CSS0012476 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 1.2e-82 311.6 568 42.8
GSVIVG01029915001 Vitis vinifera HOM05D001437 ORTHO05D001297 5.4e-80 302.8 568 39.4
Manes.09G135500 Manihot esculenta HOM05D001437 ORTHO05D001297 4.3e-77 293.1 578 38.4
Rhsim03G0045400 Rhododendron simsii HOM05D001437 ORTHO05D001297 1.2e-76 291.6 491 43.8
Eucgr.K01548 Eucalyptus grandis HOM05D001437 ORTHO05D001297 3.1e-75 287.0 580 39.0
Oeu044219.1 Olea europaea HOM05D001437 ORTHO05D001297 1.5e-74 284.6 574 39.9
CSS0046561 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 2.6e-74 283.9 505 43.0
Solyc10g076990.3 Solanum lycopersicum HOM05D001437 ORTHO05D001297 2.6e-74 283.9 632 39.1
Thecc.05G237700 Theobroma cacao HOM05D001437 ORTHO05D001297 4.4e-74 283.1 579 39.0
Sopen10g028670 Solanum pennellii HOM05D001437 ORTHO05D001297 9.8e-74 282.0 633 38.9
Nitab4.5_0000123g0070 Nicotiana tabacum HOM05D001437 ORTHO05D001297 2.2e-73 280.8 635 38.3
Manes.08G150600 Manihot esculenta HOM05D001437 ORTHO05D001297 4.9e-73 279.6 578 39.1
vmacro07632 Vaccinium macrocarpon HOM05D001437 ORTHO05D001297 4.9e-73 279.6 521 42.6
Cc00_g04900 Coffea canephora HOM05D001437 ORTHO05D001297 6.4e-73 279.3 581 39.4
Peaxi162Scf00003g05391 Petunia axillaris HOM05D001437 ORTHO05D001297 1.1e-72 278.5 635 37.8
CsaV3_3G039660 Cucumis sativus L. HOM05D001437 ORTHO05D001297 7.0e-72 275.8 548 38.7
RcHm_v2.0_Chr3g0495661 Rosa chinensis HOM05D001437 ORTHO05D001297 4.6e-71 273.1 579 38.7
MELO3C009707.2 Cucumis melo HOM05D001437 ORTHO05D001297 1.7e-70 271.2 548 38.0
Nitab4.5_0007999g0030 Nicotiana tabacum HOM05D001437 ORTHO05D001297 3.9e-70 270.0 647 37.6
TWI60G0413 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 7.3e-69 265.8 579 38.7
PGSC0003DMG400007207 Solanum tuberosum HOM05D001437 ORTHO05D012702 9.5e-69 265.4 641 37.3
CAN.G959.43 Capsicum annuum HOM05D001437 ORTHO05D001297 1.2e-68 265.0 640 36.9
MD14G1011500 Malus domestica HOM05D001437 ORTHO05D001297 2.1e-68 264.2 575 37.6
Lj2A416G33 Lonicera japonica HOM05D001437 ORTHO05D001297 6.2e-68 262.7 560 38.6
MSTRG.6272 Avicennia marina HOM05D001437 ORTHO05D001297 1.1e-67 261.9 576 38.4
ClCG10G016700 Citrullus lanatus HOM05D001437 ORTHO05D001297 1.7e-65 254.6 560 36.8
Sed0021010 Sechium edule HOM05D001437 ORTHO05D001297 1.7e-65 254.6 551 37.7
COL.COLO4_38560 Corchorus olitorius HOM05D001437 ORTHO05D001297 2.9e-65 253.8 563 36.6
MD12G1014100 Malus domestica HOM05D001437 ORTHO05D001297 1.4e-64 251.5 578 37.0
FvH4_1g29630 Fragaria vesca HOM05D001437 ORTHO05D001297 5.4e-64 249.6 578 37.9
FAN19G0786 Fragaria x ananassa HOM05D001437 ORTHO05D001297 7.1e-64 249.2 578 37.7
TWI34G1746 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 2.1e-63 247.7 576 38.0
QL07p016401 Quercus lobata HOM05D001437 ORTHO05D001297 3.5e-63 246.9 567 35.6
Prupe.7G026600 Prunus persica HOM05D001437 ORTHO05D001297 1.7e-62 244.6 581 36.1
Duzib106G0268 Durio zibethinus HOM05D001437 ORTHO05D001297 2.3e-62 244.2 571 37.1
DCAR_009088 Daucus carota HOM05D001437 ORTHO05D001297 3.9e-62 243.4 580 36.6
CiPaw.10G124600 Carya illinoinensis HOM05D001437 ORTHO05D001297 5.1e-62 243.0 568 35.9
Potri.013G068300 Populus trichocarpa HOM05D001437 ORTHO05D001297 2.5e-61 240.7 576 36.5
Ciclev10030836m.g Citrus clementina HOM05D001437 ORTHO05D001297 3.3e-61 240.4 600 35.7
QL07p016355 Quercus lobata HOM05D001437 ORTHO05D001297 7.3e-61 239.2 582 33.8
Atru.chr2.1577 Acer truncatum HOM05D001437 ORTHO05D001297 1.2e-60 238.4 580 36.7
PGR142G2142 Punica granatum HOM05D001437 ORTHO05D001297 1.1e-59 235.3 601 36.1
Duzib128G0706 Durio zibethinus HOM05D001437 ORTHO05D001297 2.3e-59 234.2 558 36.6
TAR586G0001 Trochodendron aralioides HOM05D001437 ORTHO05D001297 4.0e-59 233.4 310 50.6
Sabra13G0059600 Salix brachista HOM05D001437 ORTHO05D001297 6.8e-59 232.6 577 35.5
Gorai.007G346500 Gossypium raimondii HOM05D001437 ORTHO05D001297 1.2e-58 231.9 574 34.5
Gohir.A11G300500 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.5e-58 231.5 574 34.5
Gohir.D11G315300 Gossypium hirsutum HOM05D001437 ORTHO05D001297 2.0e-58 231.1 576 34.7
Oeu023032.1 Olea europaea HOM05D001437 ORTHO05D001297 2.6e-58 230.7 566 36.9
SalBow1G0918 Salvia bowleyana HOM05D001437 ORTHO05D001297 2.2e-57 227.6 576 36.1
SalBow1G7355 Salvia bowleyana HOM05D001437 ORTHO05D001297 2.2e-57 227.6 570 36.0
Nn2g14730 Nelumbo nucifera HOM05D001437 ORTHO05D001297 3.7e-57 226.9 580 35.2
PSO675G2600 Papaver somniferum HOM05D001437 ORTHO05D001297 6.4e-57 226.1 584 35.3
AUR62037071 Chenopodium quinoa HOM05D001437 ORTHO05D001297 1.9e-56 224.6 576 34.2
PSO541G0531 Papaver somniferum HOM05D001437 ORTHO05D001297 2.4e-56 224.2 584 35.1
SalBow6G5163 Salvia bowleyana HOM05D001437 ORTHO05D001297 3.2e-56 223.8 574 36.9
Cpa.g.sc73.19 Carica papaya HOM05D001437 ORTHO05D001297 4.6e-55 219.9 454 39.9
Gohir.A11G224206 Gossypium hirsutum HOM05D001437 ORTHO05D001297 5.1e-54 216.5 564 36.3
MBI19_g30306_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 8.6e-54 215.7 578 33.2
Gorai.007G251300 Gossypium raimondii HOM05D001437 ORTHO05D001297 1.1e-53 215.3 566 35.0
Haze_20375 Corylus avellana HOM05D001437 ORTHO05D001297 7.3e-53 212.6 613 33.9
Migut.K00184 Erythranthe guttata HOM05D001437 ORTHO05D001297 9.6e-53 212.2 560 36.1
FAN26G2075 Fragaria x ananassa HOM05D001437 ORTHO05D001297 1.6e-52 211.5 574 34.5
Lj2g0022086 Lotus japonicus HOM05D001437 ORTHO05D001297 2.8e-52 210.7 569 35.7
CANSAT78G1522 Cannabis sativa HOM05D001437 ORTHO05D001297 4.7e-52 209.9 590 34.1
Gohir.D11G237800 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.4e-51 208.4 547 35.3
Lsat_1_v5_gn_8_83661 Lactuca sativa HOM05D001437 ORTHO05D001297 1.4e-51 208.4 550 35.6
EL10Ac8g19573 Beta vulgaris HOM05D001437 ORTHO05D001297 1.5e-50 204.9 624 34.0
AUR62036504 Chenopodium quinoa HOM05D001437 ORTHO05D001297 2.0e-50 204.5 583 32.8
Lalb_Chr06g0174161 Lupinus albus HOM05D001437 ORTHO05D001297 4.4e-50 203.4 638 33.4
Phvul.004G052500 Phaseolus vulgaris HOM05D001437 ORTHO05D001297 7.6e-50 202.6 577 33.6
Ca_04457_v3 Cicer arietinum L. HOM05D001437 ORTHO05D001297 1.7e-49 201.4 566 34.3
Glyma.03G006000 Glycine max HOM05D001437 ORTHO05D001297 1.7e-49 201.4 572 34.6
Lalb_Chr02g0157591 Lupinus albus HOM05D001437 ORTHO05D001297 3.8e-49 200.3 656 31.7
Psat1g088560 Pisum sativum HOM05D001437 ORTHO05D001297 8.4e-49 199.1 563 36.6
THA.LOC104823770 Tarenaya hassleriana HOM05D001437 ORTHO05D001297 2.4e-48 197.6 580 32.4
VMungo0464G1186 Vigna mungo HOM05D001437 ORTHO05D001297 3.2e-48 197.2 577 33.6
SGA_v2.0_scaffold106G30577 Striga asiatica HOM05D001437 ORTHO05D001297 5.4e-48 196.4 624 33.7
ECA236G0736 Erigeron canadensis HOM05D001437 ORTHO05D001297 4.6e-47 193.4 562 34.2
Glyma.05G088000 Glycine max HOM05D001437 ORTHO05D001297 2.3e-46 191.0 635 32.4
ATR0068G023 Amborella trichopoda HOM05D001437 ORTHO05D001297 3.9e-46 190.3 577 33.4
Aqoxy2G00065 Aquilegia oxysepala HOM05D001437 ORTHO05D001297 3.9e-46 190.3 546 32.6
Glyma.19G067400 Glycine max HOM05D001437 ORTHO05D001297 1.9e-45 188.0 584 33.6
arahy.Tifrunner.gnm1.ann1.Y5LKUA Arachis hypogaea HOM05D001437 ORTHO05D001297 3.6e-44 183.7 582 32.3
Medtr6g027300 Medicago truncatula HOM05D001437 ORTHO05D001297 9.0e-43 179.1 610 33.0
arahy.Tifrunner.gnm1.ann1.61QI09 Arachis hypogaea HOM05D001437 ORTHO05D001297 1.2e-42 178.7 582 32.0
Sp1g07340 Schrenkiella parvula HOM05D001437 ORTHO05D001297 7.6e-42 176.0 574 33.1
Ah.12g062060 Amaranthus hybridus HOM05D001437 ORTHO05D001297 2.2e-41 174.5 470 33.8
Migut.J01581 Erythranthe guttata HOM05D001437 ORTHO05D001297 2.9e-41 174.1 526 32.5
Carub.0001s0804 Capsella rubella HOM05D001437 ORTHO05D001297 4.9e-41 173.3 540 33.0
THA.LOC104821335 Tarenaya hassleriana HOM05D001437 ORTHO05D001297 6.4e-41 172.9 582 31.6
C05p06780 Brassica napus HOM05D001437 ORTHO05D001297 2.4e-40 171.0 580 32.8
MSTRG.19757 Avicennia marina HOM05D001437 ORTHO05D001297 3.2e-40 170.6 589 31.6
Thhalv10007026m.g Eutrema salsugineum HOM05D001437 ORTHO05D001297 4.2e-40 170.2 570 32.3
BraA06t23772Z Brassica rapa HOM05D001437 ORTHO05D001297 2.1e-39 167.9 576 32.6
A06p05630 Brassica napus HOM05D001437 ORTHO05D001297 3.5e-39 167.2 570 32.6
BolC5t29437H Brassica oleracea HOM05D001437 ORTHO05D001297 7.9e-39 166.0 584 33.2
CARHR008610 Cardamine hirsuta HOM05D001437 ORTHO05D001297 5.6e-37 159.8 563 31.1
Actinidia37838 Actinidia chinensis HOM05D001437 ORTHO05D001297 9.6e-37 159.1 557 32.3
AT1G08680 Arabidopsis thaliana HOM05D001437 ORTHO05D001297 2.1e-36 157.9 569 31.1
TPR.G33939 Trifolium pratense HOM05D001437 ORTHO05D001297 3.6e-36 157.1 515 33.2
Aa31sc20G220 Aethionema arabicum HOM05D001437 ORTHO05D001297 1.2e-34 152.1 630 30.5
AL1G19130 Arabidopsis lyrata HOM05D001437 ORTHO05D001297 2.0e-34 151.4 573 29.8
CDE02G1040 Ceratophyllum demersum HOM05D001437 ORTHO05D001297 5.5e-32 143.3 354 38.1
HanXRQChr04g0125501 Helianthus annuus HOM05D001437 ORTHO05D001297 1.8e-30 138.3 180 50.6
Zm00001eb149950 Zea mays HOM05D001437 ORTHO05D001297 1.8e-30 138.3 612 28.4
HanXRQChr06g0178091 Helianthus annuus HOM05D001437 ORTHO05D001297 4.3e-29 133.7 567 29.1
Os03g0323500 Oryza sativa ssp. japonica HOM05D001437 ORTHO05D001297 4.5e-26 123.6 497 31.4
Os01g0813900 Oryza sativa ssp. japonica HOM05D001437 ORTHO05D001297 5.8e-26 123.2 378 34.4
SHI14842 Sapria himalayana HOM05D001437 ORTHO05D001297 6.5e-25 119.8 410 32.9
CDE09G0794 Ceratophyllum demersum HOM05D001437 ORTHO05D001297 1.4e-24 118.6 208 41.3
Lsat_1_v5_gn_1_125940 Lactuca sativa HOM05D001437 ORTHO05D001297 1.2e-23 115.5 131 53.4
CDE08G1382 Ceratophyllum demersum HOM05D001437 ORTHO05D001297 1.3e-22 112.1 257 37.0
HPP92_002910 Vanilla planifolia HOM05D001437 ORTHO05D001297 1.5e-18 98.6 114 50.9
EL10Ac5g11660 Beta vulgaris HOM05D006642 ORTHO05D008856 3.8e-17 94.0 354 30.5
MBI19_g40248_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 7.7e-10 69.7 202 29.7
TAR624G0085 Trochodendron aralioides HOM05D001437 ORTHO05D001297 7.7e-10 69.7 261 32.2
PSO782G3465 Papaver somniferum HOM05D001437 ORTHO05D001297 1.3e-09 68.9 275 29.8
Nn2g11804 Nelumbo nucifera HOM05D001437 ORTHO05D001297 1.7e-09 68.6 349 28.7
CsaV3_2G002390 Cucumis sativus L. HOM05D001437 ORTHO05D001297 2.2e-09 68.2 268 31.7
PSO063G5179 Papaver somniferum HOM05D001437 ORTHO05D001297 2.9e-09 67.8 275 29.8
AUR62021526 Chenopodium quinoa HOM05D001437 ORTHO05D001297 1.4e-08 65.5 365 29.0
Medtr6g086630 Medicago truncatula HOM05D001437 ORTHO05D001297 1.9e-08 65.1 124 39.5
Os02g0208900 Oryza sativa ssp. japonica HOM05D001437 ORTHO05D001297 2.5e-08 64.7 111 39.6
Medtr8g103750 Medicago truncatula HOM05D001437 ORTHO05D001297 4.2e-08 63.9 248 30.6
AUR62011015 Chenopodium quinoa HOM05D001437 ORTHO05D001297 5.5e-08 63.5 372 29.6
MELO3C004547.2 Cucumis melo HOM05D001437 ORTHO05D001297 5.5e-08 63.5 290 30.7
Sed0023292 Sechium edule HOM05D001437 ORTHO05D001297 5.5e-08 63.5 296 30.1
PGSC0003DMG400000322 Solanum tuberosum HOM05D001437 ORTHO05D001297 5.5e-08 63.5 285 28.4
Gohir.D08G261400 Gossypium hirsutum HOM05D001437 ORTHO05D001297 7.2e-08 63.2 326 29.1
Psat6g222400 Pisum sativum HOM05D000417 ORTHO05D001297 7.2e-08 63.2 286 28.7
Sabra18G0064900 Salix brachista HOM05D001437 ORTHO05D001297 9.4e-08 62.8 543 24.7
SEGI_01593 Sequoiadendron giganteum HOM05D001437 ORTHO05D001297 9.4e-08 62.8 128 38.3
SEGI_02777 Sequoiadendron giganteum HOM05D001437 ORTHO05D001297 9.4e-08 62.8 128 38.3
Nn8g39251 Nelumbo nucifera HOM05D001437 ORTHO05D001297 1.2e-07 62.4 471 25.3
Thecc.09G113500 Theobroma cacao HOM05D001437 ORTHO05D001297 1.2e-07 62.4 351 27.1
HPP92_005546 Vanilla planifolia HOM05D001437 ORTHO05D001297 1.2e-07 62.4 531 26.4
TPR.G38992 Trifolium pratense HOM05D001437 ORTHO05D001297 1.6e-07 62.0 442 27.1
Gohir.A08G240700 Gossypium hirsutum HOM05D001437 ORTHO05D001297 2.1e-07 61.6 326 28.8
Oeu048662.2 Olea europaea HOM05D001437 ORTHO05D001297 2.7e-07 61.2 283 30.0
Psat6g222360 Pisum sativum HOM05D000417 ORTHO05D000342 2.7e-07 61.2 219 29.2
TAR586G0002 Trochodendron aralioides HOM05D001437 ORTHO05D001297 2.7e-07 61.2 178 28.1
GSVIVG01015419001 Vitis vinifera HOM05D001437 ORTHO05D001297 2.7e-07 61.2 258 29.5
CAN.G749.3 Capsicum annuum HOM05D001437 ORTHO05D001297 3.6e-07 60.8 45 64.4
MD15G1188600 Malus domestica HOM05D001437 ORTHO05D001297 4.6e-07 60.5 271 30.3
Oeu018265.1 Olea europaea HOM05D001437 ORTHO05D001297 4.6e-07 60.5 314 27.4
Prupe.7G227900 Prunus persica HOM05D001437 ORTHO05D001297 4.6e-07 60.5 256 32.0
DCAR_024706 Daucus carota HOM05D001437 ORTHO05D001297 7.9e-07 59.7 440 26.6
DCAR_031958 Daucus carota HOM05D001437 ORTHO05D001297 7.9e-07 59.7 440 26.6
Glyma.07G088500 Glycine max HOM05D001437 ORTHO05D001297 7.9e-07 59.7 317 27.8
MBI01_g16636_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 7.9e-07 59.7 457 24.1
TWI32G1313 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 7.9e-07 59.7 264 30.3
Aa31LG8G11170 Aethionema arabicum HOM05D001437 ORTHO05D001297 1.0e-06 59.3 305 27.5
CANSAT56G0530 Cannabis sativa HOM05D001437 ORTHO05D001297 1.4e-06 58.9 309 30.7
ClCG11G002590 Citrullus lanatus HOM05D001437 ORTHO05D001297 1.4e-06 58.9 285 30.5
Gohir.D06G059300 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.4e-06 58.9 277 30.3
Potri.018G076200 Populus trichocarpa HOM05D001437 ORTHO05D001297 1.4e-06 58.9 547 24.5
Cfa003281 Carpinus fangiana HOM05D001437 ORTHO05D001297 1.8e-06 58.5 338 28.1
CiPaw.04G166600 Carya illinoinensis HOM05D001437 ORTHO05D001297 1.8e-06 58.5 301 29.6
Peaxi162Scf00546g00325 Petunia axillaris HOM05D001437 ORTHO05D001297 3.0e-06 57.8 247 28.3
TWI34G1393 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 3.0e-06 57.8 262 29.4
Haze_25691 Corylus avellana HOM05D001437 ORTHO05D001297 5.1e-06 57.0 337 26.7
GSVIVG01017129001 Vitis vinifera HOM05D001437 ORTHO05D001297 5.1e-06 57.0 450 26.0
Migut.K00462 Erythranthe guttata HOM05D001437 ORTHO05D001297 6.7e-06 56.6 314 28.0
Gorai.010G069100 Gossypium raimondii HOM05D001437 ORTHO05D001297 6.7e-06 56.6 277 30.0
Solyc12g006990.2 Solanum lycopersicum HOM05D001437 ORTHO05D001297 6.7e-06 56.6 548 24.8
Ciclev10007554m.g Citrus clementina HOM05D001437 ORTHO05D001297 8.8e-06 56.2 509 25.7
Duzib187G0293 Durio zibethinus HOM05D001437 ORTHO05D001297 8.8e-06 56.2 322 27.6
TAR636G1076 Trochodendron aralioides HOM05D001437 ORTHO05D001297 8.8e-06 56.2 261 28.4


User provided reference genes

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