Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 2.2e-305 1052.0 756 100.0
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 2.3e-52 211.5 624 32.5
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 1.1e-51 209.1 1338 24.1
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 1.3e-50 205.7 1072 27.5
Actinidia31596 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.7e-50 205.3 489 36.4
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 2.2e-50 204.9 1343 24.8
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 1.8e-49 201.8 1112 28.8
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 5.3e-49 200.3 1280 27.7
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.6e-48 198.7 540 41.1
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 1.1e-46 192.6 1170 27.6
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 1.1e-46 192.6 1292 24.1
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 1.9e-46 191.8 245 49.4
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 3.2e-46 191.0 228 52.6
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 3.2e-46 191.0 620 31.8
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 3.2e-46 191.0 245 49.8
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 5.5e-46 190.3 1292 24.0
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 3.6e-45 187.6 228 52.2
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 1.8e-44 185.3 251 47.4
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 1.1e-43 182.6 1283 24.5
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 7.5e-43 179.9 206 53.4
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 1.3e-42 179.1 243 50.6
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.7e-42 178.7 238 48.7
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 8.2e-42 176.4 609 31.0
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 1.1e-41 176.0 235 47.2
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 1.8e-41 175.3 560 31.2
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 3.1e-41 174.5 1320 23.9
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 4.1e-41 174.1 1224 29.2
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 9.1e-41 172.9 206 51.5
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 9.1e-41 172.9 238 46.2
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 1.2e-40 172.6 252 48.0
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.0e-40 171.8 206 51.5
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 2.0e-40 171.8 248 48.0
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.7e-39 168.7 1290 25.2
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 5.0e-39 167.2 243 46.9
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 6.5e-39 166.8 1252 25.5
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 8.5e-39 166.4 252 42.9
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 1.5e-38 165.6 225 48.4
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 2.5e-38 164.9 227 48.9
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 4.2e-38 164.1 251 44.2
HanXRQChr17g0541141 Helianthus annuus HOM05D003806 ORTHO05D004346 5.5e-38 163.7 1012 29.7
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 4.7e-37 160.6 582 29.2
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 4.7e-37 160.6 559 33.3
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 6.1e-37 160.2 582 29.2
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 1.0e-36 159.5 253 44.3
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 1.4e-36 159.1 250 42.4
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 1.4e-36 159.1 254 44.9
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 2.3e-36 158.3 1133 25.9
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.3e-36 158.3 206 50.0
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.3e-36 158.3 621 27.4
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 6.8e-36 156.8 556 28.6
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 1.5e-35 155.6 253 43.5
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 1.5e-35 155.6 1277 26.6
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 3.4e-35 154.5 248 44.0
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 5.7e-35 153.7 243 44.4
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 1.7e-34 152.1 651 31.5
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.8e-34 151.4 217 47.0
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 3.7e-34 151.0 273 44.0
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 4.8e-34 150.6 213 47.4
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 6.3e-34 150.2 206 47.1
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 1.4e-33 149.1 252 40.9
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 1.8e-33 148.7 217 45.6
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 1.8e-33 148.7 217 46.1
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 5.4e-33 147.1 206 47.6
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 5.4e-33 147.1 206 47.6
Psat7g179080 Pisum sativum HOM05D003806 ORTHO05D004346 7.0e-33 146.7 214 47.7
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 2.0e-32 145.2 1217 24.6
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 3.5e-32 144.4 215 48.4
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 7.7e-32 143.3 1102 24.3
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 1.0e-31 142.9 253 40.7
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 1.7e-31 142.1 651 28.0
HanXRQChr15g0470351 Helianthus annuus HOM05D003806 ORTHO05D004346 5.0e-31 140.6 243 41.2
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 8.5e-31 139.8 253 39.5
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.5e-30 139.0 514 30.2
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 1.9e-30 138.7 641 27.0
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 4.2e-30 137.5 262 40.1
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 9.5e-30 136.3 1345 22.5
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 1.2e-29 136.0 1284 22.9
Peaxi162Scf00141g01119 Petunia axillaris HOM05D001948 ORTHO05D001873 1.2e-29 136.0 209 44.5
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 1.2e-29 136.0 238 42.0
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 2.1e-29 135.2 250 41.2
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 4.0e-28 131.0 917 25.3
Oeu048050.1 Olea europaea HOM05D003806 ORTHO05D004346 5.2e-28 130.6 237 40.9
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 1.2e-27 129.4 1342 25.3
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 1.2e-27 129.4 1291 25.6
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 7.5e-27 126.7 482 30.3
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 7.5e-27 126.7 232 38.8
Aqoxy7G02954 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.3e-26 125.9 466 30.9
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 2.8e-26 124.8 963 27.7
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 8.3e-26 123.2 258 40.3
Sp4g14610 Schrenkiella parvula HOM05D003806 ORTHO05D004346 1.4e-25 122.5 250 36.0
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 2.4e-25 121.7 192 43.8
THA.LOC104800972 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 9.2e-25 119.8 212 39.6
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 2.7e-24 118.2 813 31.2
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 4.5e-24 117.5 473 29.0
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 2.3e-23 115.2 1335 24.5
Actinidia12513 Actinidia chinensis HOM05D003806 ORTHO05D004346 3.8e-23 114.4 137 51.8
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 1.1e-22 112.8 448 33.5
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 4.3e-22 110.9 542 27.3
PSO541G2929 Papaver somniferum HOM05D003806 ORTHO05D004346 7.3e-22 110.2 520 26.0
SalBow7G1206 Salvia bowleyana HOM05D003806 ORTHO05D004346 2.8e-21 108.2 531 31.8
unitig_85.g27313 Utricularia gibba HOM05D003806 ORTHO05D004346 1.0e-20 106.3 228 36.8
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 4.0e-20 104.4 1292 24.3
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 7.5e-19 100.1 463 28.7
HPP92_009459 Vanilla planifolia HOM05D003806 ORTHO05D004346 9.8e-19 99.8 240 35.4
Migut.M00098 Erythranthe guttata HOM05D003806 ORTHO05D004346 1.7e-18 99.0 564 25.7
Sabra06G0015000 Salix brachista HOM05D003806 ORTHO05D004346 1.4e-17 95.9 354 28.0
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 5.4e-17 94.0 223 34.5
ATR0763G047 Amborella trichopoda HOM05D003806 ORTHO05D004346 9.2e-17 93.2 256 30.5
AL1G15120 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 4.6e-16 90.9 172 36.0
Oeu021135.1 Olea europaea HOM05D003806 ORTHO05D004346 1.7e-15 89.0 178 37.1
Sp1g04190 Schrenkiella parvula HOM05D003806 ORTHO05D004346 2.8e-13 81.6 161 36.0
CDE02G3965 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 1.0e-12 79.7 247 31.2
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 1.4e-12 79.3 85 55.3
Sabra06G0014900 Salix brachista HOM05D003806 ORTHO05D004346 2.6e-11 75.1 116 52.6
Sabra06G0015100 Salix brachista HOM05D003806 ORTHO05D004346 1.3e-10 72.8 81 56.8
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 2.9e-10 71.6 150 37.3
SEGI_00522 Sequoiadendron giganteum HOM05D003806 ORTHO05D004346 1.1e-09 69.7 248 27.0
Thhalv10016148m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 1.9e-09 68.9 117 40.2
AUR62043987 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.4e-09 68.6 84 52.4
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 1.6e-08 65.9 132 38.6
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.0e-08 65.5 79 53.2
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.0e-08 65.5 79 53.2
AUR62043599 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.0e-08 65.5 79 53.2
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 2.7e-08 65.1 155 36.8
unitig_8.g4605 Utricularia gibba HOM05D001005 ORTHO05D000836 3.5e-08 64.7 230 30.0
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 4.6e-08 64.3 132 37.1
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 4.6e-08 64.3 132 37.1
A05p13020 Brassica napus HOM05D003806 ORTHO05D004346 6.0e-08 63.9 112 41.1
Carub.0004s1356 Capsella rubella HOM05D003806 ORTHO05D004346 6.0e-08 63.9 117 40.2
CARHR126030 Cardamine hirsuta HOM05D003806 ORTHO05D004346 6.0e-08 63.9 136 36.8
CDE05G0051 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 7.8e-08 63.5 130 33.8
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 1.0e-07 63.2 70 48.6
AL4G27610 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 1.3e-07 62.8 100 40.0
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.3e-07 62.0 470 26.0
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 1.5e-06 59.3 120 41.7
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 5.6e-06 57.4 874 30.9
AT2G32240 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 9.5e-06 56.6 119 33.6
unitig_699.g19629 Utricularia gibba HOM05D003806 ORTHO05D004346 9.5e-06 56.6 89 37.1


User provided reference genes

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