Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 3.0e-204 714.9 358 100.0
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.1e-169 600.1 348 84.5
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.3e-165 586.6 354 81.4
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.4e-164 583.2 351 81.5
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 6.9e-164 580.9 350 80.9
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.7e-162 576.2 354 79.1
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 2.2e-162 575.9 356 80.1
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.8e-162 575.1 359 78.6
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 5.4e-161 571.2 351 80.1
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 7.1e-161 570.9 356 78.1
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 9.3e-161 570.5 354 80.2
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 9.3e-161 570.5 354 77.7
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 4.6e-160 568.2 354 79.7
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 6.0e-160 567.8 356 77.8
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 6.0e-160 567.8 350 78.6
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 1.0e-159 567.0 348 80.7
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.0e-159 567.0 369 77.2
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.0e-159 567.0 350 78.3
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.8e-159 566.2 358 77.7
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 1.8e-159 566.2 354 77.7
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 2.3e-159 565.8 356 77.8
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.3e-159 565.8 349 79.1
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 8.7e-159 563.9 357 77.0
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.1e-158 563.5 349 78.8
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 4.3e-158 561.6 354 78.0
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 5.6e-158 561.2 354 76.6
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 7.4e-158 560.8 347 78.7
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 7.4e-158 560.8 354 78.8
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 7.4e-158 560.8 355 76.6
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 9.6e-158 560.5 350 79.4
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.3e-157 560.1 354 76.6
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.3e-157 560.1 354 76.6
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.6e-157 559.7 354 78.8
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.6e-157 559.7 356 76.7
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 3.7e-157 558.5 385 73.0
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.3e-154 550.1 351 77.2
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.7e-154 549.7 351 78.9
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 1.9e-153 546.2 350 76.6
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 2.4e-153 545.8 350 76.9
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 4.2e-153 545.0 345 77.7
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 4.2e-153 545.0 349 77.7
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 7.1e-153 544.3 351 76.6
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.2e-152 543.5 350 77.7
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.6e-152 543.1 358 74.6
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 2.7e-152 542.3 349 77.1
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 1.3e-151 540.0 356 74.4
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 6.7e-151 537.7 372 72.8
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.1e-150 537.0 356 76.4
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 5.6e-150 534.6 324 81.5
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 9.6e-150 533.9 329 80.2
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 6.2e-149 531.2 329 78.7
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.2e-149 531.2 332 78.0
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 4.0e-148 528.5 356 73.3
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 5.3e-148 528.1 354 75.1
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 9.0e-148 527.3 354 74.3
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.7e-146 523.1 348 75.3
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.7e-146 523.1 355 73.0
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 4.9e-146 521.5 360 72.5
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 6.5e-146 521.2 348 73.9
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.1e-145 520.4 353 72.8
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.5e-145 519.2 350 75.1
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 3.2e-145 518.8 347 75.5
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 4.2e-145 518.5 331 76.7
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.2e-145 518.5 340 74.1
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.5e-145 518.1 348 75.9
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.0e-144 514.6 334 76.0
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 6.0e-144 514.6 355 73.5
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 1.0e-143 513.8 354 71.5
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.1e-142 510.4 351 73.2
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.1e-142 510.4 355 72.1
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 3.3e-142 508.8 358 72.9
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 9.7e-142 507.3 350 73.4
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.6e-141 506.5 352 72.7
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 2.8e-141 505.8 341 76.5
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 4.8e-141 505.0 409 66.0
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 4.8e-141 505.0 313 79.6
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 6.3e-141 504.6 380 67.1
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 9.0e-140 500.7 362 69.3
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 4.5e-139 498.4 322 75.2
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 5.9e-139 498.0 352 70.7
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 2.9e-138 495.7 331 73.4
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 8.5e-138 494.2 331 73.7
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 5.5e-137 491.5 334 71.9
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 6.1e-136 488.0 330 71.2
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 5.1e-135 485.0 328 73.8
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 1.1e-134 483.8 354 68.9
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.1e-134 483.8 331 71.0
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.5e-134 483.4 331 70.4
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.5e-134 482.6 330 73.9
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 3.3e-134 482.3 331 71.9
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.7e-133 479.9 363 65.8
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.1e-132 477.2 317 73.5
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 4.1e-132 475.3 343 70.8
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 5.3e-132 474.9 371 66.8
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 1.5e-131 473.4 347 67.7
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.5e-131 471.9 328 71.3
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 7.7e-131 471.1 347 67.4
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.0e-130 470.7 326 69.9
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 2.9e-130 469.2 349 67.0
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 2.9e-130 469.2 347 66.9
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 2.9e-130 469.2 324 70.7
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 5.0e-130 468.4 329 72.0
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 6.5e-130 468.0 325 70.5
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 6.5e-130 468.0 324 70.4
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 6.5e-130 468.0 329 70.5
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 6.5e-130 468.0 348 68.7
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 8.5e-130 467.6 349 66.5
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 2.5e-129 466.1 346 67.1
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 5.5e-129 464.9 348 66.7
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 5.5e-129 464.9 333 68.8
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 7.2e-129 464.5 348 66.7
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 2.7e-128 462.6 345 69.3
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 6.7e-127 458.0 305 74.4
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 8.8e-127 457.6 358 64.5
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 8.8e-127 457.6 340 68.8
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 7.4e-126 454.5 354 64.4
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 9.7e-126 454.1 329 68.4
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 6.3e-125 451.4 328 67.1
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.3e-125 451.4 311 71.4
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 6.9e-124 448.0 265 81.5
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 5.9e-123 444.9 325 67.7
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 1.0e-122 444.1 275 80.7
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 1.7e-122 443.4 331 66.2
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 3.8e-122 442.2 327 67.6
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.4e-121 440.3 312 69.6
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.2e-120 437.2 329 67.5
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.0e-119 434.1 354 64.7
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 2.4e-116 422.9 528 46.0
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 2.0e-115 419.9 286 76.2
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 7.2e-113 411.4 265 77.4
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 3.0e-103 379.4 327 61.5
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.6e-99 367.1 350 55.1
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 2.5e-97 359.8 334 55.7
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 2.3e-95 353.2 225 76.0
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 8.6e-90 334.7 243 67.5
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 6.1e-88 328.6 278 61.5
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.8e-87 327.0 206 78.6
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.2e-86 324.3 226 72.6
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 1.1e-84 317.8 290 55.9
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 9.5e-81 304.7 265 60.0
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 2.8e-80 303.1 231 68.0
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 8.0e-80 301.6 206 72.3
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.2e-75 287.7 187 77.0
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 6.8e-71 271.9 162 80.9
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 8.1e-64 248.4 374 40.6
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 6.8e-63 245.4 185 66.5
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.1e-60 238.0 165 72.7
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.1e-60 238.0 215 57.7
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.3e-58 230.3 161 68.3
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 6.6e-58 228.8 187 66.8
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 2.2e-53 213.8 271 47.2
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 6.4e-53 212.2 144 71.5
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 6.2e-48 195.7 193 54.4
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 8.4e-45 185.3 329 39.8
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 2.6e-38 163.7 116 70.7
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.8e-31 141.0 140 52.1
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 5.5e-28 129.4 382 31.9
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.0e-26 125.2 258 36.4
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 3.0e-26 123.6 293 34.1
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.1e-23 113.6 206 38.8
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 5.3e-23 112.8 71 78.9
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 1.0e-21 108.6 67 71.6
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.2e-19 101.7 71 67.6
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 3.0e-18 97.1 85 61.2
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.1e-18 96.3 56 82.1
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.7e-16 91.3 57 71.9
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 5.5e-12 76.3 77 50.6
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.9e-10 70.1 54 59.3
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 7.0e-07 59.3 54 53.7
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 4.5e-06 56.6 57 50.9


User provided reference genes

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