Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012988 Daucus carota HOM05D004586 ORTHO05D005266 1.8e-261 905.6 530 100.0
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 6.7e-83 312.4 563 48.0
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 6.0e-39 166.4 315 40.6
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 6.0e-39 166.4 315 40.6
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 2.8e-36 157.5 233 43.8
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 1.1e-35 155.6 330 37.6
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 1.8e-35 154.8 314 38.9
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 3.1e-35 154.1 302 39.4
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 4.0e-35 153.7 302 39.1
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 6.8e-35 152.9 315 37.1
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 7.6e-34 149.4 241 44.0
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 9.9e-34 149.1 328 38.1
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 9.9e-34 149.1 241 42.7
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 3.8e-33 147.1 340 36.2
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 3.8e-33 147.1 241 42.3
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 3.8e-33 147.1 278 39.9
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 3.2e-32 144.1 281 39.9
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 1.2e-31 142.1 241 42.3
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 2.1e-31 141.4 329 38.3
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 3.5e-31 140.6 300 36.3
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 6.0e-31 139.8 276 39.9
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 7.8e-31 139.4 273 40.3
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 1.0e-30 139.0 280 37.9
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 3.9e-30 137.1 238 40.8
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 5.1e-30 136.7 319 38.9
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 5.1e-30 136.7 276 38.8
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 6.6e-30 136.3 314 35.0
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 6.6e-30 136.3 296 36.8
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 2.5e-29 134.4 329 35.3
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 3.3e-29 134.0 301 36.9
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 7.3e-29 132.9 285 37.9
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 1.2e-28 132.1 264 38.3
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 2.8e-28 131.0 237 42.2
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 4.7e-28 130.2 337 35.9
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 4.7e-28 130.2 236 40.7
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 6.2e-28 129.8 313 37.1
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 2.0e-26 124.8 311 33.4
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 5.8e-26 123.2 316 34.5
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 1.7e-25 121.7 363 33.9
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 1.7e-25 121.7 266 37.6
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 1.7e-25 121.7 343 33.5
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 2.2e-25 121.3 349 33.5
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 2.9e-25 120.9 265 39.6
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 4.9e-25 120.2 326 35.0
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 6.4e-25 119.8 330 32.1
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 1.9e-24 118.2 270 36.3
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 7.1e-24 116.3 324 33.0
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.7e-23 114.4 235 39.6
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 7.8e-23 112.8 254 36.2
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 7.8e-23 112.8 333 35.1
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 2.3e-22 111.3 278 37.1
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 2.3e-22 111.3 254 37.0
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 5.1e-22 110.2 276 37.0
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 5.1e-22 110.2 161 47.2
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 5.1e-22 110.2 306 32.4
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 1.9e-21 108.2 248 35.9
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 2.5e-21 107.8 279 37.6
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 4.3e-21 107.1 236 38.1
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 5.6e-21 106.7 305 35.1
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 5.6e-21 106.7 251 38.2
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 7.3e-21 106.3 327 35.5
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.8e-20 104.4 218 38.5
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 3.1e-19 100.9 299 33.4
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 1.2e-18 99.0 242 37.6
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 5.8e-18 96.7 238 36.1
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 2.2e-17 94.7 252 35.3
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 4.9e-17 93.6 301 32.6
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 4.9e-17 93.6 334 31.1
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 6.4e-17 93.2 282 33.3
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 1.4e-16 92.0 300 31.7
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 9.3e-16 89.4 234 34.6
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 1.2e-15 89.0 250 34.4
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 3.5e-15 87.4 304 33.2
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 6.0e-15 86.7 298 34.2
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 1.0e-14 85.9 139 42.4
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 1.3e-14 85.5 139 42.4
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 3.0e-14 84.3 171 39.2
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 3.9e-14 84.0 279 30.5
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 5.1e-14 83.6 284 33.5
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 6.7e-14 83.2 272 32.0
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.1e-13 82.4 179 35.2
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.1e-13 82.4 179 35.2
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 1.5e-13 82.0 303 31.4
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 3.3e-13 80.9 246 33.7
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 3.3e-13 80.9 82 58.5
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 4.3e-13 80.5 75 61.3
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 9.6e-13 79.3 139 41.0
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 1.3e-12 79.0 227 31.7
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 1.6e-12 78.6 146 37.7
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 1.6e-12 78.6 230 33.0
Hma1.2p1_1100F.1_g257070 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.6e-12 78.6 115 40.9
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 2.8e-12 77.8 131 41.2
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 2.8e-12 77.8 238 30.7
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 3.7e-12 77.4 266 31.6
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 4.8e-12 77.0 285 31.9
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 6.2e-12 76.6 160 39.4
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 8.1e-12 76.3 188 34.0
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 1.1e-11 75.9 55 69.1
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 1.4e-11 75.5 55 67.3
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 1.4e-11 75.5 55 67.3
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 1.4e-11 75.5 55 67.3
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 2.4e-11 74.7 125 44.0
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 2.4e-11 74.7 59 66.1
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 3.1e-11 74.3 275 33.1
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 4.0e-11 73.9 137 37.2
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 4.0e-11 73.9 137 37.2
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 4.0e-11 73.9 57 70.2
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 4.0e-11 73.9 104 45.2
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 9.0e-11 72.8 95 45.3
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 9.0e-11 72.8 308 30.8
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 1.2e-10 72.4 295 30.2
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 1.2e-10 72.4 147 39.5
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 1.2e-10 72.4 164 36.0
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 1.5e-10 72.0 55 61.8
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 2.0e-10 71.6 265 31.7
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 4.5e-10 70.5 58 62.1
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 7.6e-10 69.7 98 41.8
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 9.9e-10 69.3 327 29.4
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 1.3e-09 68.9 272 30.9
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 1.7e-09 68.6 78 50.0
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 2.9e-09 67.8 77 50.6
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 6.4e-09 66.6 77 44.2
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 2.4e-08 64.7 115 39.1
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 3.2e-08 64.3 71 53.5
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 9.3e-08 62.8 205 31.7
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 1.6e-07 62.0 278 29.1
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 2.7e-07 61.2 167 34.7
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.8e-06 58.5 41 75.6
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 3.9e-06 57.4 59 54.2


User provided reference genes

Program Settings