Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012546 Daucus carota HOM05D004104 ORTHO05D004755 7.6e-33 143.3 74 100.0
Rhsim01G0264300 Rhododendron simsii HOM05D004104 ORTHO05D004755 8.7e-13 76.6 130 40.0
Cc01_g11500 Coffea canephora HOM05D004104 ORTHO05D004755 2.5e-12 75.1 51 74.5
Cc06_g07960 Coffea canephora HOM05D004104 ORTHO05D004755 7.4e-12 73.6 51 72.5
Actinidia25786 Actinidia chinensis HOM05D004104 ORTHO05D004755 2.1e-11 72.0 133 37.6
QL09p038638 Quercus lobata HOM05D004104 ORTHO05D004755 9.0e-10 66.6 143 36.4
CiPaw.03G263800 Carya illinoinensis HOM05D004104 ORTHO05D004755 4.5e-09 64.3 144 36.8
Nitab4.5_0000470g0160 Nicotiana tabacum HOM05D004104 ORTHO05D004755 7.6e-09 63.5 63 52.4
TWI12G1345 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 7.6e-09 63.5 92 47.8
Nitab4.5_0009483g0030 Nicotiana tabacum HOM05D004104 ORTHO05D004755 1.0e-08 63.2 63 52.4
CAN.G896.9 Capsicum annuum HOM05D004104 ORTHO05D004755 1.7e-08 62.4 63 52.4
Duzib211G0552 Durio zibethinus HOM05D004104 ORTHO05D004755 2.2e-08 62.0 92 48.9
Ca_09682_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 2.9e-08 61.6 144 36.1
Lalb_Chr21g0313851 Lupinus albus HOM05D004104 ORTHO05D004755 2.9e-08 61.6 144 36.1
Thecc.01G258800 Theobroma cacao HOM05D004104 ORTHO05D004755 2.9e-08 61.6 92 48.9
Sed0024271 Sechium edule HOM05D004104 ORTHO05D004755 3.8e-08 61.2 77 51.9
Solyc09g072580.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 3.8e-08 61.2 63 52.4
Sopen09g028390 Solanum pennellii HOM05D004104 ORTHO05D004755 3.8e-08 61.2 63 52.4
PGSC0003DMG400010299 Solanum tuberosum HOM05D004104 ORTHO05D004755 3.8e-08 61.2 63 52.4
arahy.Tifrunner.gnm1.ann1.0Z487T Arachis hypogaea HOM05D000348 ORTHO05D000244 6.5e-08 60.5 92 47.8
arahy.Tifrunner.gnm1.ann1.6K1PAL Arachis hypogaea HOM05D000348 ORTHO05D000244 6.5e-08 60.5 92 47.8
Ca_09886_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 6.5e-08 60.5 142 35.2
ClCG09G007780 Citrullus lanatus HOM05D000113 ORTHO05D004634 8.4e-08 60.1 77 50.6
Psat6g055120 Pisum sativum HOM05D004104 ORTHO05D004755 8.4e-08 60.1 144 36.1
Migut.D00423 Erythranthe guttata HOM05D004104 ORTHO05D004755 1.4e-07 59.3 124 37.9
VMungo0720G2373 Vigna mungo HOM05D004104 ORTHO05D004755 1.4e-07 59.3 92 46.7
MSTRG.21496 Avicennia marina HOM05D004104 ORTHO05D004755 1.9e-07 58.9 127 36.2
Medtr1g069925 Medicago truncatula HOM05D004104 ORTHO05D004755 1.9e-07 58.9 144 35.4
Potri.002G038700 Populus trichocarpa HOM05D004104 ORTHO05D004755 1.9e-07 58.9 92 45.7
Gohir.D08G208500 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.5e-07 58.5 89 48.3
Gorai.004G220900 Gossypium raimondii HOM05D004104 ORTHO05D004755 2.5e-07 58.5 89 48.3
Phvul.007G193100 Phaseolus vulgaris HOM05D004104 ORTHO05D004755 2.5e-07 58.5 92 45.7
Potri.005G223900 Populus trichocarpa HOM05D004104 ORTHO05D004755 2.5e-07 58.5 92 45.7
arahy.Tifrunner.gnm1.ann1.2HR6HW Arachis hypogaea HOM05D004104 ORTHO05D004755 3.2e-07 58.2 43 67.4
Cpa.g.sc50.23 Carica papaya HOM05D004104 ORTHO05D004755 3.2e-07 58.2 92 47.8
Dinv34620 Davidia involucrata HOM05D004104 ORTHO05D004755 3.2e-07 58.2 125 35.2
Glyma.13G123300 Glycine max HOM05D004104 ORTHO05D004755 3.2e-07 58.2 92 45.7
CsaV3_7G027350 Cucumis sativus L. HOM05D004104 ORTHO05D004755 4.2e-07 57.8 77 49.4
Glyma.10G036900 Glycine max HOM05D004104 ORTHO05D004755 4.2e-07 57.8 92 45.7
Lsat_1_v5_gn_8_92980 Lactuca sativa HOM05D004104 ORTHO05D004755 4.2e-07 57.8 63 57.1
SGA_v2.0_scaffold138G35232 Striga asiatica HOM05D000374 ORTHO05D000238 4.2e-07 57.8 127 34.6
arahy.Tifrunner.gnm1.ann1.QEJR01 Arachis hypogaea HOM05D004104 ORTHO05D004755 5.5e-07 57.4 92 44.6
CSS0037223 Camellia sinensis var. sinensis HOM05D004104 ORTHO05D004755 5.5e-07 57.4 132 33.3
Ciclev10006103m.g Citrus clementina HOM05D004104 ORTHO05D004755 5.5e-07 57.4 52 61.5
Gohir.A08G190000 Gossypium hirsutum HOM05D004104 ORTHO05D004755 5.5e-07 57.4 89 48.3
Ciclev10023660m.g Citrus clementina HOM05D004104 ORTHO05D004755 9.3e-07 56.6 70 52.9
TPR.G24709 Trifolium pratense HOM05D004104 ORTHO05D004755 9.3e-07 56.6 141 34.8
TPR.G6322 Trifolium pratense HOM05D004104 ORTHO05D004755 9.3e-07 56.6 141 34.8
Atru.chr5.1672 Acer truncatum HOM05D004104 ORTHO05D004755 1.2e-06 56.2 141 36.2
SGA_v2.0_scaffold1G00613 Striga asiatica HOM05D004104 ORTHO05D004755 1.2e-06 56.2 127 35.4
MELO3C015732.2 Cucumis melo HOM05D004104 ORTHO05D004755 1.6e-06 55.8 43 65.1
SalBow4G1878 Salvia bowleyana HOM05D004104 ORTHO05D004755 2.1e-06 55.5 77 50.6
Prupe.8G224100 Prunus persica HOM05D004104 ORTHO05D004755 2.7e-06 55.1 69 52.2
ECA236G2125 Erigeron canadensis HOM05D004104 ORTHO05D004755 6.0e-06 53.9 63 55.6
Peaxi162Scf00855g00233 Petunia axillaris HOM05D004104 ORTHO05D004755 7.9e-06 53.5 60 46.7
RcHm_v2.0_Chr6g0288171 Rosa chinensis HOM05D004104 ORTHO05D004755 7.9e-06 53.5 74 47.3


User provided reference genes

Program Settings