Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 3.6e-274 947.6 455 100.0
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 3.1e-177 625.5 471 65.6
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 9.3e-174 614.0 455 65.3
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.8e-172 609.8 475 63.4
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 5.1e-172 608.2 471 63.3
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 8.7e-172 607.4 474 63.5
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 1.9e-171 606.3 460 64.3
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 7.4e-171 604.4 450 64.2
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 1.3e-170 603.6 456 64.5
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 2.1e-170 602.8 452 64.6
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 2.8e-170 602.4 456 63.4
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 3.7e-170 602.1 449 64.6
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 6.2e-170 601.3 457 64.1
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 8.2e-170 600.9 456 63.2
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 5.3e-169 598.2 473 62.4
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 7.6e-168 594.3 478 62.6
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 6.5e-167 591.3 456 63.2
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 6.5e-167 591.3 477 61.0
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 1.9e-166 589.7 457 62.8
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 5.5e-166 588.2 470 62.1
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 1.6e-165 586.6 454 63.7
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 2.1e-165 586.3 452 64.2
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 4.6e-165 585.1 479 61.4
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.3e-164 583.6 459 63.4
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 2.3e-164 582.8 452 63.5
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 3.9e-164 582.0 478 60.0
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 1.9e-163 579.7 451 62.1
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 3.3e-163 578.9 458 62.4
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 7.4e-163 577.8 473 60.9
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 3.7e-162 575.5 471 60.9
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.7e-162 575.5 444 62.6
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 4.8e-162 575.1 460 62.2
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 4.8e-162 575.1 461 61.2
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 4.1e-161 572.0 457 61.5
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 4.1e-161 572.0 517 57.1
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 6.9e-161 571.2 487 58.9
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 6.9e-161 571.2 445 64.5
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 9.0e-161 570.9 444 62.2
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 5.0e-159 565.1 456 59.6
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 3.2e-158 562.4 446 62.1
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 6.1e-157 558.1 467 60.0
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 1.8e-156 556.6 470 57.4
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.9e-155 553.1 457 60.4
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 2.5e-155 552.7 457 61.5
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 2.5e-155 552.7 459 60.1
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 3.3e-155 552.4 448 60.9
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 4.3e-155 552.0 458 60.9
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.3e-154 550.4 483 58.4
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 3.7e-154 548.9 466 58.2
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 6.3e-154 548.1 453 58.7
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 6.3e-154 548.1 453 58.7
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 8.2e-154 547.7 465 57.0
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 2.4e-153 546.2 453 59.6
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 2.4e-153 546.2 453 58.5
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 9.1e-153 544.3 455 58.9
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 2.0e-152 543.1 469 57.8
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 2.0e-152 543.1 464 57.3
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 3.4e-152 542.3 463 57.2
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.0e-151 540.8 473 59.0
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 1.7e-151 540.0 404 65.6
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 2.2e-151 539.7 466 59.4
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 8.5e-151 537.7 445 61.3
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 1.1e-150 537.3 453 57.6
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 3.2e-150 535.8 477 57.9
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 9.4e-150 534.3 452 57.1
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 1.2e-149 533.9 455 57.4
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 1.6e-149 533.5 463 56.6
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 1.6e-149 533.5 461 56.2
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 1.6e-149 533.5 461 56.2
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 7.9e-149 531.2 463 56.2
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 1.0e-148 530.8 458 57.9
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 3.0e-148 529.3 461 56.6
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 1.1e-147 527.3 417 65.0
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 5.7e-147 525.0 453 56.3
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 1.3e-146 523.9 463 57.0
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 1.1e-145 520.8 465 55.5
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 2.4e-145 519.6 501 52.3
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 3.1e-145 519.2 479 55.9
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 5.3e-145 518.5 495 53.5
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 5.3e-145 518.5 456 55.5
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 7.7e-144 514.6 500 52.4
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 3.8e-143 512.3 466 54.7
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 3.2e-142 509.2 414 61.4
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 1.4e-140 503.8 458 58.5
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 4.8e-138 495.4 469 54.4
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 3.2e-134 482.6 490 50.2
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 4.8e-130 468.8 361 65.7
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.4e-129 467.2 476 53.6
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 1.1e-126 457.6 388 59.8
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 4.2e-126 455.7 388 59.3
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 6.1e-125 451.8 335 66.0
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 6.8e-124 448.4 355 63.7
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 2.0e-123 446.8 439 51.0
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 2.8e-122 443.0 370 60.5
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 3.5e-120 436.0 446 50.7
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 1.9e-118 430.3 452 52.2
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 2.7e-112 409.8 359 56.5
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 5.4e-105 385.6 489 40.3
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 3.9e-103 379.4 455 44.2
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.9e-102 377.1 456 43.9
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 1.5e-99 367.5 515 38.4
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 2.0e-99 367.1 357 55.7
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 3.4e-99 366.3 298 62.8
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 3.7e-90 336.3 461 38.2
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 2.5e-78 297.0 445 39.6
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 1.2e-75 288.1 439 39.0
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 1.3e-61 241.5 241 52.7
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 1.1e-52 211.8 477 30.4
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 2.6e-43 180.6 279 39.8
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 7.2e-41 172.6 483 29.0
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.6e-40 170.2 159 57.2
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.6e-40 170.2 159 57.2
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.8e-39 167.9 234 37.6
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 1.1e-36 158.7 237 40.1
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 4.8e-21 106.7 217 37.3
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 1.1e-20 105.5 91 50.5
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.3e-18 98.6 814 18.9
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 3.8e-18 97.1 81 65.4
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.0e-15 89.0 117 41.9
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.2e-14 85.5 83 54.2
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 1.5e-14 85.1 107 41.1
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 1.7e-10 71.6 67 55.2
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.8e-07 61.6 75 44.0
CSS0016884 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 4.0e-07 60.5 66 45.5
CSS0037496 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 4.0e-07 60.5 66 45.5


User provided reference genes

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