Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012131 Daucus carota HOM05D005735 ORTHO05D006547 5.1e-148 527.7 263 100.0
Nn2g13495 Nelumbo nucifera HOM05D005735 ORTHO05D006547 9.1e-73 277.7 276 54.3
TAR636G0229 Trochodendron aralioides HOM05D005735 ORTHO05D006547 5.5e-70 268.5 282 53.2
Actinidia13829 Actinidia chinensis HOM05D005735 ORTHO05D006547 1.2e-69 267.3 231 60.6
TWI77G0204 Tripterygium wilfordii HOM05D005735 ORTHO05D006547 2.8e-69 266.2 243 58.8
Nitab4.5_0000362g0060 Nicotiana tabacum HOM05D005735 ORTHO05D006547 6.1e-69 265.0 271 55.7
Hma1.2p1_0766F.1_g215130 Hydrangea macrophylla HOM05D005735 ORTHO05D006547 1.0e-68 264.2 276 54.3
CSS0004316 Camellia sinensis var. sinensis HOM05D005735 ORTHO05D006547 3.0e-68 262.7 281 53.0
Prupe.6G262400 Prunus persica HOM05D005735 ORTHO05D006547 2.0e-67 260.0 252 56.7
Sabra06G0068800 Salix brachista HOM05D005735 ORTHO05D006547 2.6e-67 259.6 284 52.1
FvH4_6g12970 Fragaria vesca HOM05D005735 ORTHO05D006547 4.4e-67 258.8 278 54.0
Atru.chr8.2067 Acer truncatum HOM05D005735 ORTHO05D006547 5.7e-67 258.5 256 54.3
Solyc09g011300.3 Solanum lycopersicum HOM05D005735 ORTHO05D006547 7.5e-67 258.1 236 59.3
Actinidia29177 Actinidia chinensis HOM05D005735 ORTHO05D006547 9.8e-67 257.7 232 59.5
Manes.09G096300 Manihot esculenta HOM05D005735 ORTHO05D006547 9.8e-67 257.7 279 53.0
Lalb_Chr22g0358651 Lupinus albus HOM05D005735 ORTHO05D006547 1.3e-66 257.3 224 60.3
MD12G1150800 Malus domestica HOM05D005735 ORTHO05D006547 1.3e-66 257.3 251 55.0
Phvul.010G015300 Phaseolus vulgaris HOM05D005735 ORTHO05D006547 1.3e-66 257.3 239 56.5
Dinv37132 Davidia involucrata HOM05D005735 ORTHO05D006547 2.2e-66 256.5 295 51.9
QL07p028744 Quercus lobata HOM05D005735 ORTHO05D006547 2.2e-66 256.5 208 61.1
RcHm_v2.0_Chr3g0465081 Rosa chinensis HOM05D005735 ORTHO05D006547 2.8e-66 256.1 246 55.7
arahy.Tifrunner.gnm1.ann1.879M1U Arachis hypogaea HOM05D005735 ORTHO05D006547 3.7e-66 255.8 210 61.9
arahy.Tifrunner.gnm1.ann1.ECZP7J Arachis hypogaea HOM05D005735 ORTHO05D006547 3.7e-66 255.8 210 61.9
Potri.006G091000 Populus trichocarpa HOM05D005735 ORTHO05D006547 6.3e-66 255.0 267 52.8
Thecc.05G031800 Theobroma cacao HOM05D005735 ORTHO05D006547 6.3e-66 255.0 251 55.4
CsaV3_4G025430 Cucumis sativus L. HOM05D005735 ORTHO05D006547 8.3e-66 254.6 261 54.8
Gohir.A09G153300 Gossypium hirsutum HOM05D005735 ORTHO05D006547 8.3e-66 254.6 273 52.7
Gohir.D09G149000 Gossypium hirsutum HOM05D005735 ORTHO05D006547 8.3e-66 254.6 273 52.7
Gorai.006G170200 Gossypium raimondii HOM05D005735 ORTHO05D006547 8.3e-66 254.6 273 52.7
Sopen09g006020 Solanum pennellii HOM05D005735 ORTHO05D006547 1.1e-65 254.2 208 63.5
HanXRQChr06g0177411 Helianthus annuus HOM05D005735 ORTHO05D006547 1.4e-65 253.8 237 57.4
Lalb_Chr24g0401021 Lupinus albus HOM05D005735 ORTHO05D006547 1.4e-65 253.8 265 52.8
CiPaw.09G199400 Carya illinoinensis HOM05D005735 ORTHO05D006547 1.8e-65 253.4 208 61.5
Ciclev10012178m.g Citrus clementina HOM05D005735 ORTHO05D006547 1.8e-65 253.4 208 61.5
CAN.G229.30 Capsicum annuum HOM05D005735 ORTHO05D006547 5.4e-65 251.9 208 62.5
COL.COLO4_14723 Corchorus olitorius HOM05D005735 ORTHO05D006547 7.0e-65 251.5 210 61.0
MELO3C003165.2 Cucumis melo HOM05D005735 ORTHO05D006547 7.0e-65 251.5 208 61.1
Lj2A88G66 Lonicera japonica HOM05D005735 ORTHO05D006547 7.0e-65 251.5 227 58.1
ECA236G4371 Erigeron canadensis HOM05D005735 ORTHO05D006547 9.2e-65 251.1 260 53.5
MBI14_g09010_MAGBIO Magnolia biondii HOM05D005735 ORTHO05D006547 9.2e-65 251.1 215 58.6
Glyma.01G099700 Glycine max HOM05D005735 ORTHO05D006547 1.2e-64 250.8 210 60.0
PSO513G0055 Papaver somniferum HOM05D005735 ORTHO05D006547 1.2e-64 250.8 279 51.6
CANSAT35G1842 Cannabis sativa HOM05D005735 ORTHO05D006547 2.0e-64 250.0 232 55.2
Cc06_g02200 Coffea canephora HOM05D005735 ORTHO05D006547 2.0e-64 250.0 223 58.7
Dinv35555 Davidia involucrata HOM05D005735 ORTHO05D006547 2.0e-64 250.0 268 53.4
Migut.J00281 Erythranthe guttata HOM05D005735 ORTHO05D006547 2.0e-64 250.0 229 58.1
Eucgr.B02718 Eucalyptus grandis HOM05D005735 ORTHO05D006547 2.0e-64 250.0 249 53.0
FAN05G2836 Fragaria x ananassa HOM05D005735 ORTHO05D006547 2.0e-64 250.0 284 51.4
Glyma.03G069600 Glycine max HOM05D005735 ORTHO05D006547 2.0e-64 250.0 210 60.0
Cfa017317 Carpinus fangiana HOM05D005735 ORTHO05D006547 2.7e-64 249.6 277 50.5
Lj3g0007667 Lotus japonicus HOM05D005735 ORTHO05D006547 2.7e-64 249.6 245 52.7
Rhsim04G0162200 Rhododendron simsii HOM05D005735 ORTHO05D006547 2.7e-64 249.6 225 57.8
GSVIVG01034092001 Vitis vinifera HOM05D005735 ORTHO05D006547 4.5e-64 248.8 225 56.9
MD04G1136300 Malus domestica HOM05D005735 ORTHO05D006547 7.8e-64 248.1 256 54.3
Aqoxy2G02353 Aquilegia oxysepala HOM05D005735 ORTHO05D006547 1.3e-63 247.3 290 49.0
Duzib093G1348 Durio zibethinus HOM05D005735 ORTHO05D006547 1.7e-63 246.9 287 48.8
PSO339G4903 Papaver somniferum HOM05D005735 ORTHO05D006547 2.3e-63 246.5 216 59.3
Peaxi162Scf00318g00510 Petunia axillaris HOM05D005735 ORTHO05D006547 1.1e-62 244.2 197 63.5
CiPaw.10G148500 Carya illinoinensis HOM05D005735 ORTHO05D006547 1.5e-62 243.8 210 60.0
VMungo0331G1562 Vigna mungo HOM05D005735 ORTHO05D006547 1.5e-62 243.8 210 58.1
Sc01g0004650 Simmondsia chinensis HOM05D005735 ORTHO05D006547 2.5e-62 243.0 222 58.1
TPR.G17885 Trifolium pratense HOM05D005735 ORTHO05D006547 4.3e-62 242.3 272 49.3
EL10Ac1g00952 Beta vulgaris HOM05D005735 ORTHO05D006547 1.6e-61 240.4 254 52.4
PGR031G0186 Punica granatum HOM05D005735 ORTHO05D006547 1.6e-61 240.4 244 52.0
AT3G53900 Arabidopsis thaliana HOM05D005735 ORTHO05D006547 2.1e-61 240.0 247 52.2
BolC8t50518H Brassica oleracea HOM05D005735 ORTHO05D006547 2.1e-61 240.0 244 52.5
CDE04G2966 Ceratophyllum demersum HOM05D005735 ORTHO05D006547 2.1e-61 240.0 210 58.6
Hund16974 Selenicereus undatus HOM05D005735 ORTHO05D006547 2.1e-61 240.0 252 51.2
BcaC08g44651 Brassica carinata HOM05D005735 ORTHO05D006547 3.6e-61 239.2 245 51.8
C06p21670 Brassica napus HOM05D005735 ORTHO05D006547 3.6e-61 239.2 245 51.8
BolC6t37356H Brassica oleracea HOM05D005735 ORTHO05D006547 3.6e-61 239.2 245 51.8
Cpa.g.sc56.31 Carica papaya HOM05D005735 ORTHO05D006547 3.6e-61 239.2 202 60.4
BcaB01g00229 Brassica carinata HOM05D005735 ORTHO05D006547 4.7e-61 238.8 200 58.5
Medtr4g020090 Medicago truncatula HOM05D005735 ORTHO05D006547 6.1e-61 238.4 266 50.8
BcaC07g39745 Brassica carinata HOM05D000012 ORTHO05D002345 8.0e-61 238.0 200 59.0
BraA09t40153Z Brassica rapa HOM05D005735 ORTHO05D006547 8.0e-61 238.0 200 58.5
AUR62004273 Chenopodium quinoa HOM05D005735 ORTHO05D006547 8.0e-61 238.0 223 56.5
BraA07t29866Z Brassica rapa HOM05D005735 ORTHO05D006547 1.8e-60 236.9 200 58.5
AL5G34880 Arabidopsis lyrata HOM05D005735 ORTHO05D006547 2.3e-60 236.5 247 51.0
Lsat_1_v5_gn_8_84641 Lactuca sativa HOM05D005735 ORTHO05D006547 3.0e-60 236.1 240 53.8
THA.LOC104805616 Tarenaya hassleriana HOM05D005735 ORTHO05D006547 4.0e-60 235.7 260 49.2
BcaB02g07762 Brassica carinata HOM05D005735 ORTHO05D006547 5.2e-60 235.3 200 58.0
A07p21840 Brassica napus HOM05D005735 ORTHO05D006547 5.2e-60 235.3 200 58.0
ATR0559G328 Amborella trichopoda HOM05D005735 ORTHO05D006547 1.2e-59 234.2 210 57.1
DCAR_028771 Daucus carota HOM05D005735 ORTHO05D006547 1.2e-59 234.2 216 56.5
Thhalv10010595m.g Eutrema salsugineum HOM05D005735 ORTHO05D006547 1.5e-59 233.8 200 57.5
Oeu001404.1 Olea europaea HOM05D005735 ORTHO05D006547 2.0e-59 233.4 209 57.9
CARHR163810 Cardamine hirsuta HOM05D005735 ORTHO05D006547 2.6e-59 233.0 238 52.1
Zm00001eb289550 Zea mays HOM05D005735 ORTHO05D006547 2.6e-59 233.0 267 47.2
Psat7g240200 Pisum sativum HOM05D005735 ORTHO05D006547 4.4e-59 232.3 211 57.3
HPP92_027961 Vanilla planifolia HOM05D005735 ORTHO05D006547 4.4e-59 232.3 269 48.7
Mapoly0035s0109 Marchantia polymorpha HOM05D005735 ORTHO05D006547 5.7e-59 231.9 212 56.1
AUR62033384 Chenopodium quinoa HOM05D005735 ORTHO05D006547 2.2e-58 229.9 234 54.3
Sp5g08500 Schrenkiella parvula HOM05D005735 ORTHO05D006547 2.9e-58 229.6 249 49.8
Ca_20080_v3 Cicer arietinum L. HOM05D005735 ORTHO05D006547 3.7e-58 229.2 203 57.1
HanXRQChr04g0124581 Helianthus annuus HOM05D005735 ORTHO05D006547 4.9e-58 228.8 210 55.2
Os05g0455700 Oryza sativa ssp. japonica HOM05D005735 ORTHO05D006547 6.4e-58 228.4 218 54.6
Carub.0005s2048 Capsella rubella HOM05D005735 ORTHO05D006547 8.3e-58 228.0 200 55.5
FAN02G2999 Fragaria x ananassa HOM05D005735 ORTHO05D006547 1.1e-57 227.6 267 49.1
Aa31sc27G110 Aethionema arabicum HOM05D005735 ORTHO05D006547 1.2e-56 224.2 242 50.4
Migut.J00280 Erythranthe guttata HOM05D005735 ORTHO05D006547 2.0e-56 223.4 202 55.4
Duzib128G0016 Durio zibethinus HOM05D005735 ORTHO05D006547 1.1e-54 217.6 252 48.8
Pp3c9_24300 Physcomitrium patens HOM05D005735 ORTHO05D006547 9.5e-54 214.5 212 52.8
Haze_20857 Corylus avellana HOM05D005735 ORTHO05D006547 8.0e-53 211.5 276 45.7
Haze_20854 Corylus avellana HOM05D005735 ORTHO05D006547 1.4e-52 210.7 276 45.7
SMO147G0009 Selaginella moellendorffii HOM05D005735 ORTHO05D006547 1.4e-52 210.7 197 52.8
Nitab4.5_0006535g0030 Nicotiana tabacum HOM05D005735 ORTHO05D006547 1.8e-52 210.3 262 48.5
ClCG04G007800 Citrullus lanatus HOM05D005735 ORTHO05D006547 8.9e-52 208.0 263 48.3
vmacro08634 Vaccinium macrocarpon HOM05D005735 ORTHO05D006547 9.8e-51 204.5 241 50.2
Sed0015161 Sechium edule HOM05D005735 ORTHO05D006547 1.9e-49 200.3 196 55.6
Hund27335 Selenicereus undatus HOM05D005735 ORTHO05D006547 2.4e-49 199.9 391 34.3
CBR_g17719 Chara braunii HOM05D005735 ORTHO05D006547 8.9e-44 181.4 200 42.5
Nn2g13496 Nelumbo nucifera HOM05D005735 ORTHO05D006547 2.0e-43 180.3 150 61.3
Zm00001eb412190 Zea mays HOM05D005735 ORTHO05D006547 2.0e-43 180.3 226 45.6
MCO15G321 Micromonas commoda HOM05D005735 ORTHO05D006547 2.2e-42 176.8 199 45.2
unitig_578.g15880 Utricularia gibba HOM05D005735 ORTHO05D006547 2.9e-42 176.4 170 55.9
CANSAT35G0868 Cannabis sativa HOM05D005735 ORTHO05D006547 8.3e-42 174.9 168 54.8
AagrBONN_evm.TU.Sc2ySwM_228.3184 Anthoceros agrestis HOM05D005735 ORTHO05D006547 6.0e-40 168.7 163 53.4
FAN14G2901 Fragaria x ananassa HOM05D005735 ORTHO05D006547 7.8e-40 168.3 197 49.2
Ah.05g175740 Amaranthus hybridus HOM05D005735 ORTHO05D006547 2.3e-39 166.8 254 42.9
SGA_v2.0_scaffold75G24970 Striga asiatica HOM05D005735 ORTHO05D006547 2.5e-38 163.3 215 44.7
PRCOL_00001881 Prasinoderma coloniale HOM05D005735 ORTHO05D006547 4.0e-36 156.0 190 38.9
C08p29170 Brassica napus HOM05D005735 ORTHO05D006547 2.6e-35 153.3 150 52.7
PGSC0003DMG400008888 Solanum tuberosum HOM05D005735 ORTHO05D006547 7.6e-35 151.8 83 81.9
A09p46850 Brassica napus HOM05D005735 ORTHO05D006547 2.2e-34 150.2 139 54.7
CSS0015426 Camellia sinensis var. sinensis HOM05D005735 ORTHO05D006547 4.9e-34 149.1 85 74.1
Cre11.g467778 Chlamydomonas reinhardtii HOM05D005735 ORTHO05D006547 1.9e-33 147.1 208 39.9
CSS0042696 Camellia sinensis var. sinensis HOM05D005735 ORTHO05D006547 1.9e-30 137.1 73 82.2
MSTRG.5635 Avicennia marina HOM05D005735 ORTHO05D006547 7.3e-30 135.2 146 51.4
FAN09G1978 Fragaria x ananassa HOM05D005735 ORTHO05D006547 5.4e-25 119.0 90 63.3
CAN.G208.27 Capsicum annuum HOM05D005735 ORTHO05D006547 2.2e-18 97.1 72 65.3
BraA09t38956Z Brassica rapa HOM05D011067 ORTHO05D028343 5.1e-15 85.9 103 42.7
BraA05t19030Z Brassica rapa HOM05D011067 ORTHO05D028343 2.5e-14 83.6 103 41.7
Lsat_1_v5_gn_9_19861 Lactuca sativa HOM05D005735 ORTHO05D006547 3.3e-14 83.2 43 83.7
Cpa.g.sc56.35 Carica papaya HOM05D005735 ORTHO05D006547 1.7e-10 70.9 66 50.0
BcaC05g28138 Brassica carinata HOM05D011067 ORTHO05D014965 2.7e-08 63.5 49 53.1
Solyc03g063860.1 Solanum lycopersicum HOM05D005735 ORTHO05D006547 2.7e-08 63.5 98 38.8
A03p21220 Brassica napus HOM05D011067 ORTHO05D014965 4.6e-08 62.8 54 48.1
C01p21930 Brassica napus HOM05D011067 ORTHO05D014965 4.6e-08 62.8 54 48.1
BcaC03g14360 Brassica carinata HOM05D011067 ORTHO05D014965 7.9e-08 62.0 54 48.1
C03p64990 Brassica napus HOM05D011067 ORTHO05D014965 3.9e-07 59.7 54 44.4
Cre13.g573800 Chlamydomonas reinhardtii HOM05D001287 ORTHO05D001226 8.7e-07 58.5 194 26.8
BcaB02g08502 Brassica carinata HOM05D001257 ORTHO05D009517 1.5e-06 57.8 80 40.0
BcaC04g22813 Brassica carinata HOM05D011067 ORTHO05D014965 1.5e-06 57.8 54 46.3
C09p15120 Brassica napus HOM05D011067 ORTHO05D014965 1.5e-06 57.8 54 46.3
BolC3t18757H Brassica oleracea HOM05D011067 ORTHO05D028343 2.5e-06 57.0 88 37.5
BraA04t16281Z Brassica rapa HOM05D001257 ORTHO05D009517 2.5e-06 57.0 78 41.0
Cpa.g.sc56.36 Carica papaya HOM05D005735 ORTHO05D006547 2.5e-06 57.0 41 61.0
BolC9t54418H Brassica oleracea HOM05D011067 ORTHO05D028343 9.6e-06 55.1 88 38.6


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