Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011824 Daucus carota HOM05D003492 ORTHO05D005115 4.8e-41 170.6 81 100.0
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 2.9e-25 118.2 75 72.0
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.8e-24 115.5 76 71.1
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 9.2e-24 113.2 76 69.7
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 2.0e-23 112.1 75 69.3
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 2.0e-23 112.1 77 68.8
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 2.0e-23 112.1 76 68.4
Nitab4.5_0011089g0020 Nicotiana tabacum HOM05D003492 ORTHO05D005115 2.7e-23 111.7 74 71.6
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 4.6e-23 110.9 76 71.1
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 5.9e-23 110.5 76 67.1
TAR623G0911 Trochodendron aralioides HOM05D003492 ORTHO05D005115 5.9e-23 110.5 77 68.8
Hma1.2p1_0235F.1_g098570 Hydrangea macrophylla HOM05D003492 ORTHO05D005115 7.8e-23 110.2 75 66.7
CAN.G78.68 Capsicum annuum HOM05D003492 ORTHO05D005115 1.0e-22 109.8 74 70.3
Lj8A65T40 Lonicera japonica HOM05D003492 ORTHO05D005115 2.3e-22 108.6 78 62.8
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 3.9e-22 107.8 74 70.3
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 6.6e-22 107.1 75 68.0
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 6.6e-22 107.1 75 65.3
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 8.6e-22 106.7 76 67.1
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 1.1e-21 106.3 76 64.5
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 1.5e-21 105.9 76 64.5
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 1.9e-21 105.5 76 65.8
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 1.9e-21 105.5 73 67.1
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 2.5e-21 105.1 76 65.8
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 2.5e-21 105.1 76 65.8
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 3.3e-21 104.8 75 65.3
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.3e-21 104.8 75 65.3
FAN03G1608 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.3e-21 104.8 75 65.3
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.3e-21 104.8 75 65.3
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.3e-21 104.8 75 65.3
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 3.3e-21 104.8 75 66.7
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 4.3e-21 104.4 78 65.4
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 4.3e-21 104.4 77 63.6
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 4.3e-21 104.4 76 67.1
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 4.3e-21 104.4 76 65.8
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 5.6e-21 104.0 78 65.4
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 5.6e-21 104.0 76 64.5
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 5.6e-21 104.0 76 65.8
CiPaw.01G300100 Carya illinoinensis HOM05D003492 ORTHO05D005115 7.3e-21 103.6 76 63.2
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 7.3e-21 103.6 76 64.5
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 9.5e-21 103.2 76 63.2
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 1.2e-20 102.8 78 62.8
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 1.2e-20 102.8 71 69.0
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 1.2e-20 102.8 76 64.5
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 1.6e-20 102.4 76 64.5
Ca_30996_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 1.6e-20 102.4 76 64.5
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 1.6e-20 102.4 76 64.5
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 1.6e-20 102.4 76 64.5
Actinidia00955 Actinidia chinensis HOM05D003492 ORTHO05D019467 2.1e-20 102.1 77 62.3
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 2.8e-20 101.7 76 63.2
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 6.2e-20 100.5 76 61.8
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.1e-19 99.8 76 67.1
Duzib114G0096 Durio zibethinus HOM05D003492 ORTHO05D005115 1.4e-19 99.4 76 63.2
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 1.4e-19 99.4 76 61.8
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 1.8e-19 99.0 76 63.2
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 2.3e-19 98.6 76 64.5
Peaxi162Scf00284g00912 Petunia axillaris HOM05D003492 ORTHO05D005115 5.2e-19 97.4 76 64.5
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 6.8e-19 97.1 78 60.3
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 8.9e-19 96.7 76 63.2
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 1.5e-18 95.9 75 62.7
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 2.6e-18 95.1 76 61.8
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 3.4e-18 94.7 76 61.8
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 3.4e-18 94.7 76 61.8
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 4.4e-18 94.4 76 61.8
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 5.8e-18 94.0 76 60.5
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 3.7e-17 91.3 76 63.2
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 3.7e-17 91.3 76 61.8
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 3.7e-17 91.3 76 63.2
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 6.4e-17 90.5 69 60.9
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 1.4e-16 89.4 75 61.3
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 1.4e-16 89.4 76 56.6
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 1.9e-16 89.0 75 62.7
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 1.9e-16 89.0 75 62.7
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 2.4e-16 88.6 76 59.2
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 3.2e-16 88.2 76 55.3
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 4.1e-16 87.8 76 60.5
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 5.4e-16 87.4 76 61.8
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 5.4e-16 87.4 80 56.2
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 7.0e-16 87.0 75 60.0
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 9.2e-16 86.7 76 59.2
Psat2g065680 Pisum sativum HOM05D003492 ORTHO05D005115 9.2e-16 86.7 76 53.9
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 1.2e-15 86.3 74 60.8
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 2.0e-15 85.5 77 59.7
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 2.0e-15 85.5 77 59.7
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 2.0e-15 85.5 80 52.5
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 2.7e-15 85.1 76 55.3
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 6.0e-15 84.0 76 59.2
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 6.0e-15 84.0 76 59.2
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 6.0e-15 84.0 75 54.7
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 1.0e-14 83.2 72 61.1
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 1.3e-14 82.8 76 56.6
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 3.0e-14 81.6 72 63.9
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 5.0e-14 80.9 74 58.1
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 1.9e-13 79.0 77 57.1
HPP92_012036 Vanilla planifolia HOM05D003492 ORTHO05D005115 1.9e-13 79.0 79 51.9
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 5.6e-13 77.4 76 56.6
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 1.6e-12 75.9 74 56.8
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 9.9e-10 66.6 76 48.7
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 1.3e-09 66.2 72 43.1
SHI03338 Sapria himalayana HOM05D003492 ORTHO05D005115 1.9e-08 62.4 72 44.4


User provided reference genes

Program Settings