Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 4.4e-236 821.6 674 100.0
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 1.4e-133 481.1 449 56.1
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 2.5e-130 470.3 670 69.7
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 2.5e-127 460.3 671 70.9
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 1.7e-126 457.6 669 69.7
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.2e-126 457.2 669 69.7
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 3.7e-126 456.4 671 62.1
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.4e-125 454.5 682 73.8
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 1.8e-125 454.1 671 69.4
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 3.1e-125 453.4 435 66.9
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 4.1e-125 453.0 435 66.9
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 2.0e-124 450.7 452 64.2
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 4.5e-124 449.5 673 70.9
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 7.7e-124 448.7 616 74.8
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.3e-123 448.0 670 69.9
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.7e-123 447.6 658 68.5
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 5.0e-123 446.0 665 57.9
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 4.2e-122 443.0 449 63.3
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 5.5e-122 442.6 657 58.4
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.2e-121 441.4 662 70.2
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 6.1e-121 439.1 687 71.0
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 7.9e-121 438.7 657 59.4
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.0e-120 438.3 672 67.0
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 1.1e-119 434.9 675 71.3
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 1.5e-119 434.5 673 68.4
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.5e-119 434.5 666 70.4
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 4.4e-119 433.0 670 71.3
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 7.4e-119 432.2 451 61.2
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 6.3e-118 429.1 447 64.7
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.4e-117 427.9 422 66.6
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 7.0e-117 425.6 435 61.4
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 7.0e-117 425.6 446 61.7
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 1.2e-116 424.9 449 62.6
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.2e-116 424.9 369 68.6
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.0e-116 424.1 414 62.8
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.2e-115 420.6 669 61.9
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 2.9e-115 420.2 673 68.5
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 2.9e-115 420.2 378 66.4
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 5.0e-115 419.5 435 59.8
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 5.0e-115 419.5 673 66.6
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 5.0e-115 419.5 673 66.6
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 4.2e-114 416.4 672 67.4
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 9.4e-114 415.2 427 50.4
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.1e-113 414.1 467 60.2
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 4.7e-113 412.9 448 60.0
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 4.7e-113 412.9 419 62.3
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 5.2e-112 409.5 445 63.4
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 8.8e-112 408.7 430 58.6
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 8.8e-112 408.7 659 70.4
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 1.1e-111 408.3 442 49.1
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.5e-111 407.9 426 62.4
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 2.0e-111 407.5 431 61.0
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 2.6e-111 407.1 428 55.8
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.6e-111 407.1 426 61.7
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 3.3e-111 406.8 445 58.0
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 9.7e-111 405.2 361 68.1
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 2.2e-110 404.1 538 79.4
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 2.2e-110 404.1 633 66.8
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.8e-109 401.0 439 62.0
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 3.1e-109 400.2 551 77.5
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 4.1e-109 399.8 362 64.9
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.3e-109 399.4 678 60.6
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 7.0e-109 399.1 593 74.5
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 5.9e-108 396.0 435 58.2
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.7e-107 394.4 441 56.0
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 2.2e-107 394.0 435 58.4
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 5.0e-107 392.9 369 66.1
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 5.0e-107 392.9 395 62.3
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 8.5e-107 392.1 655 67.8
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 1.1e-106 391.7 369 66.9
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 1.9e-106 391.0 430 58.1
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 2.5e-106 390.6 633 64.8
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 3.2e-106 390.2 433 61.0
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 3.2e-106 390.2 434 61.8
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.2e-106 389.8 665 43.6
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.2e-106 389.8 665 43.6
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 4.2e-106 389.8 401 60.8
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 1.2e-105 388.3 368 68.5
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 2.7e-105 387.1 386 62.7
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 4.7e-105 386.3 559 77.3
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 3.0e-104 383.6 430 51.6
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 4.0e-104 383.3 356 66.3
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 8.8e-104 382.1 437 59.7
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.2e-103 381.7 390 56.4
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 3.4e-103 380.2 478 53.8
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 4.4e-103 379.8 391 62.4
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 9.7e-103 378.6 336 69.3
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 2.2e-102 377.5 411 61.8
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 2.0e-100 370.9 326 68.4
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 2.7e-100 370.5 365 66.3
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 2.7e-100 370.5 365 66.3
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 3.5e-100 370.2 356 68.0
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 5.0e-99 366.3 455 56.9
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 8.5e-99 365.5 442 55.9
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 1.1e-98 365.2 356 67.4
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 3.2e-98 363.6 353 66.0
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 7.2e-98 362.5 365 65.8
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.4e-96 358.2 368 65.8
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 1.4e-96 358.2 380 58.9
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.3e-94 351.7 454 54.8
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 3.4e-87 327.0 370 57.8
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 5.2e-72 276.6 197 65.5
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 4.3e-66 256.9 362 40.6
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 9.2e-61 239.2 377 50.4
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.1e-57 226.1 198 56.1
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.5e-47 195.3 299 42.1
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 1.6e-44 185.3 442 37.6
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.5e-42 178.7 376 44.9
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 2.5e-34 151.4 367 43.6
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 3.2e-21 107.8 142 37.3
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 1.2e-20 105.9 197 60.4
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 1.2e-20 105.9 138 43.5
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 6.1e-20 103.6 57 80.7
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.8e-11 75.5 55 60.0


User provided reference genes

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