Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 2.7e-208 728.4 367 100.0
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 2.7e-123 446.0 378 64.0
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 2.3e-122 443.0 383 61.1
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 2.3e-122 443.0 370 64.1
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 5.1e-122 441.8 377 66.0
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 2.1e-120 436.4 369 63.7
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 2.8e-120 436.0 374 63.4
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 4.8e-120 435.3 307 73.0
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 3.1e-119 432.6 366 63.7
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 3.4e-118 429.1 391 59.8
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 5.8e-118 428.3 370 63.8
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 5.8e-118 428.3 372 64.8
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 5.8e-118 428.3 375 63.2
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 7.6e-118 427.9 367 63.2
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.3e-117 427.2 391 59.6
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 2.9e-117 426.0 365 63.3
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 6.5e-117 424.9 366 62.8
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 1.9e-116 423.3 375 61.6
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 1.9e-116 423.3 293 71.7
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 3.2e-116 422.5 366 63.1
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 1.3e-114 417.2 387 58.4
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 2.3e-114 416.4 369 61.2
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 3.0e-114 416.0 361 64.3
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 1.1e-113 414.1 278 71.9
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 1.9e-113 413.3 366 62.3
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 2.5e-113 412.9 303 68.0
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 3.3e-113 412.5 362 60.5
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 3.3e-113 412.5 366 61.2
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 5.7e-113 411.8 279 72.4
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 1.3e-112 410.6 262 77.1
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 2.1e-112 409.8 361 61.8
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 3.7e-112 409.1 365 61.1
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 4.8e-112 408.7 373 62.2
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 1.8e-111 406.8 379 61.7
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 3.1e-111 406.0 402 60.2
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 3.1e-111 406.0 359 61.8
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 4.1e-111 405.6 373 60.9
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 4.1e-111 405.6 359 62.4
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 5.3e-111 405.2 368 59.5
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 1.5e-110 403.7 374 59.6
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 1.5e-110 403.7 262 73.7
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 1.5e-110 403.7 355 62.5
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 2.6e-110 402.9 355 62.5
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 3.4e-110 402.5 386 58.0
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 7.6e-110 401.4 379 59.1
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 1.0e-109 401.0 329 66.0
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 8.5e-109 397.9 270 72.6
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 1.9e-108 396.7 380 59.2
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 2.5e-108 396.4 288 68.4
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 7.2e-108 394.8 307 65.5
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 2.1e-107 393.3 275 70.2
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 2.1e-107 393.3 270 71.9
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 6.1e-107 391.7 363 59.5
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 7.9e-107 391.3 366 59.6
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 7.9e-107 391.3 276 69.9
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 7.9e-107 391.3 364 58.5
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 2.3e-106 389.8 352 60.5
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 2.3e-106 389.8 254 73.2
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 2.3e-106 389.8 299 66.2
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 2.3e-106 389.8 382 57.3
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 3.9e-106 389.0 362 59.1
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 3.9e-106 389.0 248 75.4
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 1.1e-105 387.5 335 60.9
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 1.5e-105 387.1 367 58.0
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 1.5e-105 387.1 370 58.6
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 1.5e-105 387.1 361 59.0
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 1.5e-105 387.1 253 75.1
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 5.7e-105 385.2 362 56.6
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 7.4e-105 384.8 367 59.4
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 7.4e-105 384.8 362 56.6
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 9.7e-105 384.4 299 65.9
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 1.6e-104 383.6 359 59.3
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 3.7e-104 382.5 364 58.8
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 3.7e-104 382.5 334 60.5
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 4.8e-104 382.1 359 58.8
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 6.3e-104 381.7 359 59.1
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 4.5e-102 375.6 288 65.6
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 7.7e-102 374.8 373 57.4
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 7.7e-102 374.8 369 58.3
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 1.1e-100 370.9 306 61.1
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 3.2e-100 369.4 303 63.0
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 4.2e-100 369.0 289 65.4
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 3.6e-99 365.9 329 62.3
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 4.6e-99 365.5 362 55.2
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 1.5e-97 360.5 279 64.5
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 8.2e-96 354.8 384 51.6
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 2.0e-94 350.1 278 65.1
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 6.5e-85 318.5 371 51.5
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 6.1e-83 312.0 292 54.8
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.2e-81 307.8 244 65.2
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 5.0e-77 292.4 233 60.9
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 7.2e-76 288.5 264 60.2
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 1.0e-74 284.6 250 55.2
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 6.8e-74 282.0 369 47.7
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 2.2e-72 276.9 237 52.7
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 6.3e-72 275.4 274 49.3
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 4.5e-70 269.2 366 48.1
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 6.5e-69 265.4 276 54.0
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 2.5e-68 263.5 274 57.3
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 9.5e-68 261.5 274 56.9
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 2.4e-63 246.9 238 49.6
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 2.0e-62 243.8 240 49.6
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 8.0e-59 231.9 200 59.5
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.1e-55 221.5 185 62.2
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 4.7e-51 206.1 116 80.2
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 2.9e-48 196.8 172 58.7
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 4.9e-48 196.1 251 42.6
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 8.3e-48 195.3 228 40.8
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 4.3e-44 183.0 120 74.2
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 1.2e-43 181.4 152 52.0
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 2.1e-38 164.1 219 40.2
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 3.5e-30 136.7 212 44.3
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 1.9e-28 131.0 124 56.5
CSS0026858 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 8.1e-27 125.6 137 54.7
CSS0050509 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 1.2e-25 121.7 147 51.0
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.6e-22 111.3 102 58.8
Ciclev10013255m.g Citrus clementina HOM05D006539 ORTHO05D008694 6.0e-22 109.4 66 80.3
QL02p073354 Quercus lobata HOM05D006539 ORTHO05D008694 7.8e-22 109.0 129 51.9
Cre09.g392950 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D044332 5.4e-15 86.3 221 28.5
QL02p073352 Quercus lobata HOM05D006539 ORTHO05D008694 5.4e-15 86.3 66 69.7
MD07G1180000 Malus domestica HOM05D006539 ORTHO05D248072 8.7e-13 79.0 104 43.3
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 2.0e-09 67.8 142 31.0
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 2.6e-09 67.4 143 29.4
MCO05G154 Micromonas commoda HOM05D006539 ORTHO05D044332 2.2e-08 64.3 207 27.5
Cre01.g027350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 1.1e-07 62.0 155 27.7
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.1e-07 62.0 170 27.1
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 1.4e-07 61.6 153 28.8
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 1.4e-07 61.6 154 27.9
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 3.2e-07 60.5 153 31.4
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 2.7e-06 57.4 146 29.5
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 4.6e-06 56.6 142 28.9
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 4.6e-06 56.6 174 27.6
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 4.6e-06 56.6 174 27.6


User provided reference genes

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