Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 2.1e-165 585.5 272 100.0
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 3.7e-117 425.2 274 70.1
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.6e-112 409.8 271 68.3
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 6.1e-112 407.9 271 67.2
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.8e-111 406.4 271 67.9
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 7.4e-110 401.0 272 65.1
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 9.7e-110 400.6 267 68.2
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.3e-109 400.2 271 63.5
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 6.3e-109 397.9 271 66.8
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 5.0e-106 388.3 266 65.0
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 6.5e-106 387.9 271 63.1
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 1.9e-105 386.3 270 63.7
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 6.1e-104 381.3 279 62.0
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.0e-103 380.6 270 64.1
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 8.8e-103 377.5 271 61.6
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 3.3e-102 375.6 271 63.1
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 1.3e-101 373.6 271 63.5
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 2.8e-101 372.5 272 64.0
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 6.3e-101 371.3 275 59.6
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 8.2e-101 370.9 271 60.1
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 1.4e-100 370.2 271 60.1
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 4.1e-100 368.6 266 62.0
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 6.9e-100 367.9 269 60.6
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 6.9e-100 367.9 267 60.3
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.2e-99 367.1 272 63.2
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.5e-99 366.7 270 61.1
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 4.5e-99 365.2 268 60.4
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.3e-98 363.6 274 62.8
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 6.5e-98 361.3 272 60.3
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.1e-97 360.5 267 58.4
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.9e-97 359.8 267 59.2
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 7.2e-97 357.8 270 58.5
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 9.4e-97 357.5 281 60.9
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.2e-96 357.1 276 60.1
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 2.7e-96 355.9 252 65.1
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 7.9e-96 354.4 270 59.6
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 7.9e-96 354.4 270 59.6
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.4e-95 353.6 270 59.6
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 3.0e-95 352.4 276 59.1
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 3.9e-95 352.1 270 59.6
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 5.1e-95 351.7 244 66.0
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 1.1e-94 350.5 273 58.6
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 1.5e-94 350.1 272 58.1
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.6e-94 349.4 284 59.2
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 5.7e-94 348.2 270 59.3
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 3.7e-93 345.5 276 57.2
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 9.1e-92 340.9 278 57.2
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 2.9e-90 335.9 237 62.9
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 8.5e-90 334.3 270 58.9
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 8.0e-88 327.8 234 63.7
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 4.0e-87 325.5 272 57.0
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 8.8e-87 324.3 268 53.4
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.7e-85 320.1 270 55.9
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.8e-84 316.6 269 53.5
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 1.6e-83 313.5 270 51.5
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 5.9e-83 311.6 265 53.2
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 2.2e-82 309.7 268 54.9
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.4e-79 300.4 244 55.3
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.2e-78 297.4 250 56.4
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 4.7e-72 275.4 265 46.0
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 2.3e-71 273.1 203 60.1
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 1.5e-70 270.4 216 57.9
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.2e-69 266.5 304 47.4
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 6.3e-69 265.0 232 52.6
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 4.3e-65 252.3 240 52.9
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 2.9e-61 239.6 268 39.2
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 3.7e-61 239.2 205 54.1
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 4.9e-61 238.8 267 43.4
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 1.2e-59 234.2 183 57.4
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.5e-57 227.3 268 39.2
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 1.6e-56 223.8 264 37.1
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 3.6e-56 222.6 203 52.2
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 8.6e-50 201.4 352 35.2
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 2.8e-48 196.4 228 43.9
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.2e-35 154.5 109 60.6
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 2.4e-31 140.2 119 56.3
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 8.4e-29 131.7 109 57.8
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.7e-21 107.5 63 71.4
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 6.0e-19 99.0 258 25.6
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 2.8e-16 90.1 176 34.7
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 2.6e-14 83.6 60 60.0
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 2.1e-08 63.9 42 59.5
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.2e-06 58.2 42 59.5


User provided reference genes

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