Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 3.5e-193 678.3 395 100.0
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 4.3e-66 256.1 432 44.9
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 2.8e-65 253.4 421 44.9
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 2.4e-61 240.4 416 42.8
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 1.2e-60 238.0 428 43.5
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 2.1e-60 237.3 446 43.0
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 1.6e-57 227.6 444 43.5
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 5.2e-56 222.6 441 43.3
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 1.2e-55 221.5 420 41.9
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 2.0e-55 220.7 433 43.9
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 5.8e-55 219.2 444 41.7
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 4.2e-53 213.0 420 43.3
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 4.2e-53 213.0 427 41.5
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 4.2e-53 213.0 426 42.0
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 6.0e-52 209.1 421 41.8
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 7.8e-52 208.8 442 39.6
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 5.1e-51 206.1 419 41.3
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 6.6e-51 205.7 439 41.5
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 6.6e-51 205.7 384 40.9
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 8.7e-51 205.3 412 42.2
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 2.5e-50 203.8 427 41.7
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 5.6e-50 202.6 464 37.1
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 9.6e-50 201.8 411 40.6
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 1.2e-49 201.4 431 39.2
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 1.2e-49 201.4 436 38.8
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 2.1e-49 200.7 337 46.6
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 2.8e-49 200.3 444 41.4
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 1.1e-48 198.4 412 39.6
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 3.1e-48 196.8 362 43.9
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 3.4e-47 193.4 445 38.7
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 5.8e-47 192.6 524 33.8
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 7.6e-47 192.2 437 39.4
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 1.7e-46 191.0 430 37.9
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 3.8e-46 189.9 444 36.5
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 6.4e-46 189.1 425 40.0
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 8.4e-46 188.7 448 38.4
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 4.2e-45 186.4 446 38.1
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 4.2e-45 186.4 444 37.6
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 4.2e-45 186.4 421 39.7
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 5.4e-45 186.0 305 45.9
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 1.6e-44 184.5 398 40.2
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 2.1e-44 184.1 426 37.3
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 2.7e-44 183.7 431 38.1
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 4.6e-44 183.0 337 42.7
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 6.0e-44 182.6 444 37.2
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 1.7e-43 181.0 426 37.1
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 2.3e-43 180.6 421 39.2
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 2.3e-43 180.6 433 37.4
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 3.9e-43 179.9 441 38.8
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 5.1e-43 179.5 418 36.8
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 6.6e-43 179.1 186 62.9
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 6.6e-43 179.1 396 39.1
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 8.7e-43 178.7 356 43.0
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 1.5e-42 177.9 448 39.5
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 2.5e-42 177.2 423 37.4
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 5.6e-42 176.0 430 37.9
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 9.6e-42 175.3 457 37.0
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 9.6e-42 175.3 421 35.9
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 1.3e-41 174.9 436 37.4
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.3e-41 174.9 403 39.0
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.3e-41 174.9 435 39.5
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 2.1e-41 174.1 433 38.6
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 4.8e-41 172.9 270 50.4
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 4.8e-41 172.9 435 38.4
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 4.8e-41 172.9 435 36.8
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 6.2e-41 172.6 311 42.4
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 6.2e-41 172.6 421 37.1
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 8.1e-41 172.2 440 37.3
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 8.1e-41 172.2 434 39.6
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 8.1e-41 172.2 418 36.6
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 1.1e-40 171.8 400 40.8
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 2.4e-40 170.6 356 41.0
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 1.5e-39 167.9 430 37.0
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 2.6e-39 167.2 194 54.1
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 4.5e-39 166.4 433 37.4
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 7.6e-39 165.6 416 41.1
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 7.6e-39 165.6 338 41.7
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 7.6e-39 165.6 461 35.1
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 3.8e-38 163.3 436 36.5
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 3.8e-38 163.3 421 35.2
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 6.4e-38 162.5 418 35.6
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 1.1e-37 161.8 316 38.6
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 2.4e-37 160.6 445 35.3
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 5.4e-37 159.5 506 33.8
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 5.4e-37 159.5 341 35.8
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 7.1e-37 159.1 341 35.8
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 9.3e-37 158.7 185 53.0
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.6e-36 157.9 285 48.4
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 2.1e-36 157.5 431 34.6
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 4.6e-36 156.4 312 41.7
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 1.0e-35 155.2 371 39.9
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 1.8e-35 154.5 486 33.1
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.8e-35 154.5 273 49.1
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 1.8e-35 154.5 400 35.2
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 2.3e-35 154.1 366 36.9
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 1.5e-34 151.4 268 38.8
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 2.5e-34 150.6 343 38.5
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 2.5e-34 150.6 183 52.5
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 4.3e-34 149.8 334 38.0
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 1.3e-33 148.3 317 38.2
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 1.6e-33 147.9 250 39.6
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 8.1e-33 145.6 481 31.8
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 9.0e-32 142.1 235 43.8
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 7.6e-31 139.0 350 36.3
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 2.9e-30 137.1 427 32.8
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea HOM05D006277 ORTHO05D007673 2.5e-29 134.0 384 34.4
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 3.2e-29 133.7 306 38.6
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 5.5e-29 132.9 174 49.4
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 1.6e-28 131.3 361 33.0
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 2.3e-27 127.5 208 44.2
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 4.8e-25 119.8 181 44.8
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 8.2e-25 119.0 330 34.8
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 1.7e-22 111.3 120 50.8
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 2.7e-20 104.0 182 42.9
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 3.5e-20 103.6 129 45.7
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 2.3e-19 100.9 247 38.5
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 8.7e-19 99.0 364 32.4
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 1.1e-18 98.6 196 39.8
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 3.3e-18 97.1 189 39.7
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 4.8e-17 93.2 119 47.1
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 3.1e-16 90.5 136 43.4
CiPaw.10G123600 Carya illinoinensis HOM05D006277 ORTHO05D007673 2.2e-14 84.3 55 76.4
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 5.5e-13 79.7 110 40.0
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 3.0e-11 73.9 293 29.0
Hma1.2p1_1235F.1_g269240 Hydrangea macrophylla HOM05D006277 ORTHO05D007673 6.7e-11 72.8 192 33.3
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 1.1e-08 65.5 85 50.6


User provided reference genes

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