Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 7.4e-112 407.1 194 100.0
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.7e-79 299.7 189 70.4
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 3.7e-79 298.5 189 70.9
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 3.7e-79 298.5 189 70.4
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 6.3e-79 297.7 186 73.1
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.8e-78 296.2 189 70.4
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 9.1e-78 293.9 184 71.7
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.0e-77 292.7 186 71.5
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.0e-77 292.7 186 71.5
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 2.0e-77 292.7 187 73.8
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.0e-77 292.7 189 68.8
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 4.5e-77 291.6 186 73.1
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.7e-77 290.8 186 71.0
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.0e-76 290.4 190 70.5
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.3e-76 290.0 185 68.6
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 1.7e-76 289.7 189 67.2
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.8e-76 288.5 186 71.5
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 3.8e-76 288.5 187 70.6
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 6.5e-76 287.7 186 71.0
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 8.5e-76 287.3 183 72.1
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.1e-75 287.0 187 70.1
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.5e-75 286.6 185 70.3
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 1.5e-75 286.6 185 70.8
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 1.5e-75 286.6 183 70.5
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 2.5e-75 285.8 182 69.2
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 2.5e-75 285.8 186 69.9
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 2.5e-75 285.8 186 70.4
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.7e-74 282.3 189 67.7
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 3.6e-74 282.0 184 67.9
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 4.7e-74 281.6 186 68.3
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.7e-74 281.6 188 68.6
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.7e-74 281.6 188 68.6
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 6.1e-74 281.2 186 70.4
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 2.3e-73 279.3 186 69.9
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 6.7e-73 277.7 187 69.0
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 8.8e-73 277.3 184 68.5
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.1e-72 276.9 184 69.0
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.5e-72 276.6 205 65.9
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 2.0e-72 276.2 184 66.3
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 2.0e-72 276.2 186 68.8
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 2.0e-72 276.2 186 67.7
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.0e-72 276.2 186 67.7
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 2.6e-72 275.8 185 68.1
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 2.6e-72 275.8 186 67.7
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 2.6e-72 275.8 185 68.6
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 4.4e-72 275.0 185 67.6
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 5.7e-72 274.6 191 66.5
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 5.7e-72 274.6 186 68.8
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 7.5e-72 274.2 186 67.2
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.7e-71 273.1 186 69.4
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 3.7e-71 271.9 186 66.7
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.7e-71 271.9 188 66.5
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 8.2e-71 270.8 185 64.3
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.1e-70 270.4 186 66.1
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.1e-70 270.4 186 67.2
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 9.1e-70 267.3 187 65.8
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 1.6e-69 266.5 185 65.9
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 2.0e-69 266.2 183 67.2
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 2.7e-69 265.8 182 68.1
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.5e-69 265.4 184 66.3
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 3.5e-69 265.4 187 66.3
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 3.5e-69 265.4 189 66.1
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 5.9e-69 264.6 186 65.6
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 1.7e-68 263.1 185 64.9
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.9e-68 262.3 184 66.3
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 5.0e-68 261.5 185 64.3
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 5.0e-68 261.5 185 64.3
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 6.5e-68 261.2 185 64.3
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 8.5e-68 260.8 215 58.6
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 1.1e-67 260.4 185 63.8
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.1e-67 260.4 182 65.4
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 1.5e-67 260.0 185 63.2
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 1.5e-67 260.0 187 64.2
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 1.9e-67 259.6 185 63.2
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 2.5e-67 259.2 185 64.9
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 2.5e-67 259.2 184 63.6
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 4.2e-67 258.5 185 63.2
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 7.2e-67 257.7 187 64.2
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 7.2e-67 257.7 183 64.5
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.2e-66 256.9 223 55.6
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.2e-66 256.9 187 65.8
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 3.6e-66 255.4 186 63.4
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 4.7e-66 255.0 182 65.4
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.0e-65 253.8 185 62.7
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 3.0e-65 252.3 191 62.8
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 3.0e-65 252.3 190 63.2
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 4.0e-65 251.9 185 64.3
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 4.0e-65 251.9 187 62.0
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 2.6e-64 249.2 187 59.9
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.4e-64 248.4 190 61.6
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 7.5e-64 247.7 186 61.8
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.7e-63 246.5 183 63.9
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 3.7e-63 245.4 186 62.4
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 3.1e-62 242.3 186 59.1
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.0e-60 237.3 185 59.5
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 1.3e-60 236.9 189 60.3
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.5e-60 234.6 185 60.0
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 9.4e-59 230.7 183 55.7
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.4e-57 226.9 193 53.9
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 2.3e-57 226.1 185 57.3
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 3.0e-57 225.7 190 57.9
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 3.0e-57 225.7 186 57.5
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.2e-56 223.8 183 54.6
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 7.5e-56 221.1 146 68.5
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 9.8e-56 220.7 183 58.5
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 1.8e-54 216.5 175 58.9
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.1e-54 215.3 145 67.6
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 3.5e-53 212.2 184 56.0
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 7.7e-53 211.1 176 56.8
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 7.7e-53 211.1 191 53.9
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.0e-52 210.7 182 54.4
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.5e-51 206.1 184 56.0
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 9.5e-51 204.1 178 56.2
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 1.2e-50 203.8 176 57.4
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.4e-49 200.3 185 53.5
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 4.0e-49 198.7 188 53.2
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 7.5e-48 194.5 184 51.1
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.7e-47 193.4 185 53.0
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 5.4e-46 188.3 132 64.4
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 6.8e-33 144.8 109 59.6
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.2e-31 139.8 84 73.8
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 1.1e-27 127.5 79 69.6
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 5.2e-25 118.6 108 51.9
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.4e-24 115.5 99 56.6
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.2e-16 90.9 95 48.4
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.5e-13 79.3 98 42.9
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 2.0e-08 63.5 78 42.3


User provided reference genes

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