Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 0.0e+00 1255.7 669 100.0
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 1.8e-178 630.2 793 49.7
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 4.0e-173 612.5 849 47.2
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 6.8e-173 611.7 836 47.6
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 5.7e-172 608.6 852 47.1
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 4.3e-167 592.4 855 45.5
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.4e-165 587.4 852 46.0
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 2.3e-165 586.6 849 46.6
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 1.4e-162 577.4 815 46.6
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 2.7e-161 573.2 857 46.8
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.1e-157 561.2 802 46.3
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 5.2e-157 558.9 779 46.7
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 1.5e-156 557.4 890 44.7
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 3.4e-156 556.2 807 45.2
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 4.4e-156 555.8 827 44.6
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 9.9e-156 554.7 910 42.4
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 6.4e-155 552.0 897 42.5
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 8.3e-155 551.6 788 45.9
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.4e-154 550.8 816 45.1
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 3.2e-154 549.7 816 45.1
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 5.4e-154 548.9 912 41.1
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 2.1e-153 547.0 901 43.1
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 6.0e-153 545.4 882 40.8
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 6.0e-153 545.4 903 42.3
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 6.0e-153 545.4 878 40.8
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 7.8e-153 545.0 818 44.0
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 1.3e-152 544.3 877 42.5
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.3e-152 544.3 915 41.6
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 2.5e-151 540.0 850 45.1
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 7.3e-151 538.5 810 44.7
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 2.8e-150 536.6 855 44.2
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 1.4e-149 534.3 882 42.4
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 1.4e-149 534.3 910 43.2
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 3.1e-149 533.1 880 41.0
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 6.8e-149 531.9 911 41.4
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 1.2e-148 531.2 881 42.5
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 1.5e-148 530.8 874 43.0
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.5e-148 530.8 810 44.8
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 3.4e-148 529.6 884 42.0
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 1.3e-147 527.7 808 43.6
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 4.9e-147 525.8 899 42.7
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 6.4e-147 525.4 896 42.2
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 8.4e-147 525.0 814 43.0
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.4e-146 524.2 867 41.1
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 9.2e-146 521.5 882 42.5
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 1.6e-145 520.8 872 40.9
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 3.5e-145 519.6 885 43.2
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 4.6e-145 519.2 810 43.8
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 1.0e-144 518.1 822 43.7
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.7e-144 517.3 825 41.9
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.9e-144 516.2 810 44.2
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 6.6e-144 515.4 781 43.7
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.1e-143 514.6 892 39.8
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 4.3e-143 512.7 890 40.0
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 5.6e-143 512.3 924 39.6
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 2.8e-142 510.0 895 40.4
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 8.1e-142 508.4 816 43.5
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 2.0e-140 503.8 817 41.6
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 4.4e-140 502.7 909 40.3
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 5.8e-140 502.3 823 44.2
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.3e-139 501.1 887 41.0
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 2.2e-139 500.4 798 42.6
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 4.9e-139 499.2 798 40.9
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.4e-138 497.7 838 43.1
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.4e-138 496.9 856 41.0
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 8.7e-136 488.4 853 40.9
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.9e-135 487.3 801 40.4
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 9.6e-135 485.0 814 41.8
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.6e-134 484.2 908 39.9
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 3.6e-134 483.0 602 49.7
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 3.6e-134 483.0 798 41.7
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 4.8e-134 482.6 801 40.8
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 1.5e-132 477.6 813 40.8
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 2.9e-131 473.4 779 40.9
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 8.4e-131 471.9 820 40.5
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 1.4e-130 471.1 825 40.6
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 4.2e-130 469.5 800 41.1
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 4.2e-130 469.5 681 46.3
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 9.3e-130 468.4 802 40.1
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 2.1e-129 467.2 800 40.8
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 2.7e-129 466.8 804 39.9
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 1.1e-127 461.5 803 39.5
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 5.6e-127 459.1 731 42.5
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 9.6e-127 458.4 822 40.8
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.6e-126 457.6 765 40.0
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 6.2e-126 455.7 830 39.5
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 6.2e-126 455.7 788 41.2
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 3.5e-121 439.9 543 52.3
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 3.3e-119 433.3 671 42.3
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 5.5e-114 416.0 803 38.0
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 2.7e-113 413.7 589 43.6
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 7.4e-111 405.6 763 39.4
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 1.1e-106 391.7 742 38.4
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 2.3e-104 384.0 846 35.7
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 5.3e-101 372.9 483 48.4
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 5.3e-101 372.9 635 41.3
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 1.0e-91 342.0 806 35.2
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 4.5e-84 316.6 324 60.2
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.2e-79 302.0 351 48.7
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 4.1e-77 293.5 427 43.6
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 7.0e-77 292.7 456 42.5
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 7.2e-66 256.1 330 47.9
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 3.7e-62 243.8 514 40.1
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 6.6e-51 206.5 734 28.6
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 2.5e-50 204.5 792 26.9
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.9e-37 161.8 659 27.3
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 4.6e-36 157.1 158 58.2
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 7.3e-34 149.8 248 46.0
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 1.8e-32 145.2 790 25.7
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 5.1e-27 127.1 993 22.8
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 2.1e-25 121.7 146 52.1
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 2.8e-25 121.3 221 38.5
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 3.3e-18 97.8 140 46.4
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 3.4e-15 87.8 105 50.5
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 2.9e-14 84.7 55 70.9
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 4.2e-13 80.9 133 39.1
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 6.0e-12 77.0 243 28.8
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.8e-11 75.5 100 52.0
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.5e-10 72.4 131 45.0
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 4.0e-08 64.3 67 47.8


User provided reference genes

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