Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009651 Daucus carota HOM05D005064 ORTHO05D006611 1.5e-141 506.1 248 100.0
DCAR_028424 Daucus carota HOM05D005064 ORTHO05D006611 4.8e-39 165.6 136 66.2
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 3.9e-25 119.4 400 32.0
CSS0001431 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 1.3e-12 77.8 313 27.5
COL.COLO4_14461 Corchorus olitorius HOM05D005064 ORTHO05D006611 1.4e-11 74.3 135 41.5
Gohir.A04G095400 Gossypium hirsutum HOM05D005064 ORTHO05D006611 1.4e-11 74.3 136 39.0
TAR633G1737 Trochodendron aralioides HOM05D005064 ORTHO05D006611 1.4e-11 74.3 124 41.1
Duzib093G0745 Durio zibethinus HOM05D005064 ORTHO05D006611 5.5e-11 72.4 135 40.0
Ca_16367_v3 Cicer arietinum L. HOM05D005064 ORTHO05D006611 7.2e-11 72.0 138 39.1
Lalb_Chr22g0360891 Lupinus albus HOM05D005064 ORTHO05D006611 7.2e-11 72.0 133 39.8
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea HOM05D005064 ORTHO05D006611 9.4e-11 71.6 113 42.5
Thecc.05G007600 Theobroma cacao HOM05D005064 ORTHO05D006611 9.4e-11 71.6 134 40.3
QL07p034075 Quercus lobata HOM05D005064 ORTHO05D006611 1.2e-10 71.2 135 39.3
Gohir.D04G135300 Gossypium hirsutum HOM05D005064 ORTHO05D006611 1.6e-10 70.9 136 39.0
Gorai.012G119100 Gossypium raimondii HOM05D005064 ORTHO05D006611 1.6e-10 70.9 136 39.0
ATR0594G137 Amborella trichopoda HOM05D005064 ORTHO05D006611 2.7e-10 70.1 137 34.3
TPR.G19329 Trifolium pratense HOM05D005064 ORTHO05D006611 2.7e-10 70.1 138 39.1
CSS0042379 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 3.6e-10 69.7 136 36.0
CiPaw.09G214500 Carya illinoinensis HOM05D005064 ORTHO05D006611 3.6e-10 69.7 117 42.7
Medtr3g083250 Medicago truncatula HOM05D005064 ORTHO05D006611 3.6e-10 69.7 117 41.0
Rhsim05G0225400 Rhododendron simsii HOM05D005064 ORTHO05D006611 3.6e-10 69.7 135 39.3
Glyma.13G010700 Glycine max HOM05D005064 ORTHO05D006611 6.1e-10 68.9 118 40.7
MD01G1008700 Malus domestica HOM05D005064 ORTHO05D006611 6.1e-10 68.9 123 41.5
Prupe.4G287200 Prunus persica HOM05D005064 ORTHO05D006611 6.1e-10 68.9 134 40.3
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea HOM05D005064 ORTHO05D006611 7.9e-10 68.6 113 41.6
Phvul.006G005800 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 7.9e-10 68.6 117 41.0
VMungo0540G1710 Vigna mungo HOM05D005064 ORTHO05D006611 1.0e-09 68.2 117 40.2
FAN23G3111 Fragaria x ananassa HOM05D005064 ORTHO05D006611 1.4e-09 67.8 121 42.1
Manes.09G111200 Manihot esculenta HOM05D005064 ORTHO05D006611 1.4e-09 67.8 134 38.1
Psat5g101280 Pisum sativum HOM05D005064 ORTHO05D006611 1.4e-09 67.8 138 38.4
Dinv35394 Davidia involucrata HOM05D005064 ORTHO05D006611 3.0e-09 66.6 135 37.0
CsaV3_3G033440 Cucumis sativus L. HOM05D005064 ORTHO05D006611 3.9e-09 66.2 111 41.4
MBI03_g13049_MAGBIO Magnolia biondii HOM05D005064 ORTHO05D006611 3.9e-09 66.2 117 39.3
Carub.0006s0020 Capsella rubella HOM05D005064 ORTHO05D006611 5.1e-09 65.9 144 37.5
FvH4_1g25820 Fragaria vesca HOM05D005064 ORTHO05D006611 6.7e-09 65.5 121 41.3
FAN19G0240 Fragaria x ananassa HOM05D005064 ORTHO05D006611 6.7e-09 65.5 121 41.3
Lj2C68T2 Lonicera japonica HOM05D005064 ORTHO05D006611 6.7e-09 65.5 115 41.7
CDE04G0109 Ceratophyllum demersum HOM05D005064 ORTHO05D006611 8.8e-09 65.1 114 40.4
Nn2g11003 Nelumbo nucifera HOM05D005064 ORTHO05D006611 8.8e-09 65.1 146 34.9
BcaC08g44292 Brassica carinata HOM05D005064 ORTHO05D006611 1.1e-08 64.7 127 35.4
CANSAT35G0044 Cannabis sativa HOM05D005064 ORTHO05D006611 1.1e-08 64.7 137 35.8
Oeu026978.1 Olea europaea HOM05D005064 ORTHO05D006611 1.1e-08 64.7 119 40.3
vmacro04273 Vaccinium macrocarpon HOM05D005064 ORTHO05D006611 1.1e-08 64.7 119 40.3
C06p17140 Brassica napus HOM05D005064 ORTHO05D006611 1.5e-08 64.3 127 35.4
BolC6t36909H Brassica oleracea HOM05D005064 ORTHO05D006611 1.5e-08 64.3 127 35.4
Ciclev10013403m.g Citrus clementina HOM05D005064 ORTHO05D006611 2.0e-08 63.9 177 33.9
Lj6g0012785 Lotus japonicus HOM05D005064 ORTHO05D006611 2.0e-08 63.9 117 37.6
Solyc02g050200.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 2.0e-08 63.9 121 39.7
Sopen02g008440 Solanum pennellii HOM05D005064 ORTHO05D006611 2.0e-08 63.9 121 39.7
RcHm_v2.0_Chr3g0484931 Rosa chinensis HOM05D005064 ORTHO05D006611 3.3e-08 63.2 121 38.8
Atru.chr8.2328 Acer truncatum HOM05D005064 ORTHO05D006611 4.4e-08 62.8 119 37.8
ECA234G3016 Erigeron canadensis HOM05D005064 ORTHO05D006611 4.4e-08 62.8 133 35.3
Medtr0191s0030 Medicago truncatula HOM05D005064 ORTHO05D006611 4.4e-08 62.8 108 39.8
Medtr6g033115 Medicago truncatula HOM05D005064 ORTHO05D006611 4.4e-08 62.8 108 39.8
Sp7g05130 Schrenkiella parvula HOM05D005064 ORTHO05D006611 4.4e-08 62.8 127 35.4
Sed0013669 Sechium edule HOM05D005064 ORTHO05D006611 4.4e-08 62.8 137 37.2
Cc06_g00810 Coffea canephora HOM05D005064 ORTHO05D006611 5.7e-08 62.4 119 37.8
BraA05t20569Z Brassica rapa HOM05D005064 ORTHO05D006611 7.4e-08 62.0 127 34.6
Sc07g0001460 Simmondsia chinensis HOM05D005064 ORTHO05D006611 9.7e-08 61.6 116 38.8
GSVIVG01030280001 Vitis vinifera HOM05D005064 ORTHO05D006611 9.7e-08 61.6 118 37.3
BcaB04g17743 Brassica carinata HOM05D005064 ORTHO05D006611 1.7e-07 60.8 119 35.3
Aa31LG1G23250 Aethionema arabicum HOM05D005064 ORTHO05D006611 2.2e-07 60.5 111 36.9
Aqoxy2G00779 Aquilegia oxysepala HOM05D005064 ORTHO05D006611 2.2e-07 60.5 122 36.1
AT4G00020 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 2.2e-07 60.5 126 38.9
AT5G01630 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 2.2e-07 60.5 136 37.5
A05p16640 Brassica napus HOM05D005064 ORTHO05D006611 2.2e-07 60.5 127 33.9
CAN.G989.4 Capsicum annuum HOM05D005064 ORTHO05D006611 2.2e-07 60.5 121 38.0
Cpa.g.sc5.230 Carica papaya HOM05D005064 ORTHO05D006611 2.8e-07 60.1 135 36.3
Haze_21075 Corylus avellana HOM05D005064 ORTHO05D006611 2.8e-07 60.1 135 39.3
Thhalv10012491m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 2.8e-07 60.1 136 36.0
Sp6g40890 Schrenkiella parvula HOM05D005064 ORTHO05D006611 2.8e-07 60.1 136 36.8
ClCG10G022430 Citrullus lanatus HOM05D005064 ORTHO05D006611 4.8e-07 59.3 136 36.0
Ah.12g059020 Amaranthus hybridus HOM05D005064 ORTHO05D006611 6.3e-07 58.9 112 37.5
Potri.014G189600 Populus trichocarpa HOM05D005064 ORTHO05D006611 6.3e-07 58.9 117 36.8
CARHR211980 Cardamine hirsuta HOM05D005064 ORTHO05D006611 8.2e-07 58.5 127 37.0
Sabra14G0144800 Salix brachista HOM05D005064 ORTHO05D006611 8.2e-07 58.5 118 37.3
TWI74G0298 Tripterygium wilfordii HOM05D005064 ORTHO05D006611 8.2e-07 58.5 135 38.5
AL6G10420 Arabidopsis lyrata HOM05D005064 ORTHO05D006611 1.1e-06 58.2 136 36.8
BcaB01g06242 Brassica carinata HOM05D005064 ORTHO05D006611 1.1e-06 58.2 117 37.6
MELO3C009135.2 Cucumis melo HOM05D005064 ORTHO05D006611 1.8e-06 57.4 115 39.1
Thhalv10027627m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 2.4e-06 57.0 124 32.3
Hund25531 Selenicereus undatus HOM05D005064 ORTHO05D006611 2.4e-06 57.0 124 34.7
EL10Ac5g12491 Beta vulgaris HOM05D005064 ORTHO05D006611 3.1e-06 56.6 122 37.7
PSO339G1571 Papaver somniferum HOM05D005064 ORTHO05D006611 3.1e-06 56.6 113 39.8
PSO801G0135 Papaver somniferum HOM05D005064 ORTHO05D006611 3.1e-06 56.6 113 39.8
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 4.1e-06 56.2 111 35.1
A03p00180 Brassica napus HOM05D005064 ORTHO05D006611 5.3e-06 55.8 127 35.4
BcaB01g06109 Brassica carinata HOM05D005064 ORTHO05D006611 7.0e-06 55.5 127 35.4
C03p00330 Brassica napus HOM05D005064 ORTHO05D006611 7.0e-06 55.5 127 35.4
BraA03t09408Z Brassica rapa HOM05D005064 ORTHO05D006611 7.0e-06 55.5 131 35.1


User provided reference genes

Program Settings