Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 3.7e-117 424.9 213 100.0
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 5.2e-34 148.7 120 60.8
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 6.8e-34 148.3 120 59.2
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 9.8e-33 144.4 120 56.7
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 3.7e-32 142.5 118 56.8
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 7.0e-31 138.3 120 55.8
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 1.2e-30 137.5 118 55.1
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 1.2e-30 137.5 121 56.2
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 2.0e-30 136.7 117 56.4
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 3.5e-30 136.0 121 57.9
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 3.5e-30 136.0 123 55.3
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 4.5e-30 135.6 120 55.0
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 5.9e-30 135.2 123 52.8
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 1.0e-29 134.4 119 58.0
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 2.3e-29 133.3 124 58.1
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 3.8e-29 132.5 123 52.0
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 5.0e-29 132.1 118 51.7
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 6.6e-29 131.7 120 50.0
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 1.5e-28 130.6 120 51.7
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 1.5e-28 130.6 114 55.3
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 1.9e-28 130.2 124 51.6
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 2.5e-28 129.8 124 56.5
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 2.5e-28 129.8 116 56.9
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 3.3e-28 129.4 118 50.0
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 4.3e-28 129.0 124 55.6
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 4.3e-28 129.0 124 55.6
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 4.3e-28 129.0 119 56.3
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 7.3e-28 128.3 116 56.9
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 2.8e-27 126.3 121 51.2
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 4.7e-27 125.6 118 47.5
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 4.7e-27 125.6 121 57.0
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 4.7e-27 125.6 121 57.0
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 1.0e-26 124.4 118 47.5
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 1.8e-26 123.6 113 56.6
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 3.0e-26 122.9 118 49.2
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 3.0e-26 122.9 112 55.4
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 3.0e-26 122.9 125 50.4
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 6.8e-26 121.7 118 48.3
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 8.9e-26 121.3 121 52.1
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 1.2e-25 120.9 122 56.6
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 2.0e-25 120.2 118 46.6
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 2.6e-25 119.8 112 52.7
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 4.4e-25 119.0 114 50.0
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 4.4e-25 119.0 116 50.0
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 5.7e-25 118.6 118 48.3
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 5.7e-25 118.6 112 50.9
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 5.7e-25 118.6 108 57.4
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 5.7e-25 118.6 141 46.8
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 7.5e-25 118.2 118 47.5
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 9.8e-25 117.9 115 50.4
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 9.8e-25 117.9 111 50.5
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 9.8e-25 117.9 130 46.2
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 1.3e-24 117.5 114 48.2
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 1.3e-24 117.5 118 48.3
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 1.7e-24 117.1 130 45.4
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 1.7e-24 117.1 116 48.3
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 2.2e-24 116.7 113 54.0
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 3.7e-24 115.9 118 48.3
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 3.7e-24 115.9 118 48.3
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 4.9e-24 115.5 116 47.4
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 1.4e-23 114.0 108 53.7
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 1.4e-23 114.0 118 43.2
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 1.4e-23 114.0 118 48.3
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 1.4e-23 114.0 118 48.3
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 1.8e-23 113.6 121 49.6
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 2.4e-23 113.2 120 48.3
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 2.4e-23 113.2 118 49.2
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 2.4e-23 113.2 112 49.1
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 3.2e-23 112.8 118 48.3
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 4.1e-23 112.5 117 43.6
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 7.0e-23 111.7 118 44.1
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 9.2e-23 111.3 118 43.2
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 9.2e-23 111.3 113 49.6
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 1.6e-22 110.5 116 49.1
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 1.6e-22 110.5 116 49.1
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 1.6e-22 110.5 118 43.2
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 1.6e-22 110.5 118 43.2
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 3.5e-22 109.4 117 42.7
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 4.6e-22 109.0 116 45.7
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 4.6e-22 109.0 113 49.6
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 4.6e-22 109.0 122 50.0
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 5.9e-22 108.6 112 53.6
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 1.3e-21 107.5 112 48.2
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 2.3e-21 106.7 115 43.5
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 1.1e-20 104.4 117 41.0
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 4.3e-20 102.4 108 49.1
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 1.0e-18 97.8 116 43.1
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 2.3e-18 96.7 121 43.0
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 2.3e-18 96.7 99 46.5
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 3.1e-18 96.3 113 45.1
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 5.2e-18 95.5 97 43.3
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 5.2e-18 95.5 117 42.7
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 3.7e-16 89.4 91 47.3
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 1.6e-14 84.0 113 39.8
BcaC09g51225 Brassica carinata HOM05D005833 ORTHO05D008135 7.8e-14 81.6 75 48.0
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 3.0e-13 79.7 128 37.5
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 8.6e-13 78.2 100 42.0
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 1.2e-09 67.8 68 52.9
CAN.G772.6 Capsicum annuum HOM05D005833 ORTHO05D008135 3.4e-09 66.2 78 39.7


User provided reference genes

Program Settings