Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009098 Daucus carota HOM05D000527 ORTHO05D016743 2.6e-144 515.4 265 100.0
DCAR_007672 Daucus carota HOM05D000527 ORTHO05D016743 7.9e-24 115.2 65 86.2
vmacro09084 Vaccinium macrocarpon HOM05D000527 ORTHO05D000559 2.9e-18 96.7 104 51.0
DCAR_020480 Daucus carota HOM05D000527 ORTHO05D000559 1.1e-17 94.7 57 86.0
unitig_8.g3508 Utricularia gibba HOM05D000527 ORTHO05D000559 9.4e-17 91.7 80 55.0
VMungo1383G0554 Vigna mungo HOM05D000527 ORTHO05D000559 1.6e-16 90.9 105 46.7
CSS0026938 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D000559 2.1e-16 90.5 64 64.1
Psat6g083720 Pisum sativum HOM05D000527 ORTHO05D000559 1.4e-15 87.8 107 43.9
HanXRQChr13g0390751 Helianthus annuus HOM05D000527 ORTHO05D000559 6.7e-15 85.5 99 48.5
GSVIVG01033305001 Vitis vinifera HOM05D000527 ORTHO05D000559 6.7e-15 85.5 58 67.2
Cc06_g16860 Coffea canephora HOM05D000527 ORTHO05D000559 8.8e-15 85.1 55 69.1
ClCG04G003310 Citrullus lanatus HOM05D000527 ORTHO05D000559 1.1e-14 84.7 58 65.5
PGR004G0504 Punica granatum HOM05D000527 ORTHO05D000559 1.1e-14 84.7 97 48.5
CiPaw.09G036600 Carya illinoinensis HOM05D000527 ORTHO05D000559 2.0e-14 84.0 55 70.9
ECA248G1680 Erigeron canadensis HOM05D000527 ORTHO05D000559 2.0e-14 84.0 97 49.5
Nitab4.5_0002649g0010 Nicotiana tabacum HOM05D000527 ORTHO05D000559 2.0e-14 84.0 67 59.7
Lalb_Chr01g0017461 Lupinus albus HOM05D000527 ORTHO05D000559 2.5e-14 83.6 103 43.7
SalBow6G4225 Salvia bowleyana HOM05D000527 ORTHO05D000559 2.5e-14 83.6 65 60.0
Sed0026045 Sechium edule HOM05D000527 ORTHO05D000559 2.5e-14 83.6 65 61.5
Potri.006G052800 Populus trichocarpa HOM05D000527 ORTHO05D000559 3.3e-14 83.2 97 48.5
Sabra06G0037200 Salix brachista HOM05D000527 ORTHO05D000559 3.3e-14 83.2 56 69.6
TWI74G0532 Tripterygium wilfordii HOM05D000527 ORTHO05D000559 4.3e-14 82.8 65 63.1
MSTRG.19870 Avicennia marina HOM05D000527 ORTHO05D000559 5.7e-14 82.4 65 60.0
Nitab4.5_0009705g0010 Nicotiana tabacum HOM05D000527 ORTHO05D000559 5.7e-14 82.4 66 59.1
Lj1g0018747 Lotus japonicus HOM05D000527 ORTHO05D000559 7.4e-14 82.0 51 68.6
Actinidia38554 Actinidia chinensis HOM05D000527 ORTHO05D000559 9.7e-14 81.6 55 67.3
Ca_08469_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 9.7e-14 81.6 97 46.4
Glyma.03G137900 Glycine max HOM05D000527 ORTHO05D000559 9.7e-14 81.6 97 46.4
MELO3C023110.2 Cucumis melo HOM05D000527 ORTHO05D000559 1.3e-13 81.3 64 60.9
Eucgr.A02374 Eucalyptus grandis HOM05D000527 ORTHO05D000559 1.3e-13 81.3 65 60.0
FAN05G4104 Fragaria x ananassa HOM05D000527 ORTHO05D000559 1.3e-13 81.3 55 67.3
Lju124C37T7 Lonicera japonica HOM05D000527 ORTHO05D000559 1.3e-13 81.3 55 69.1
MBI01_g26746_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 1.3e-13 81.3 59 66.1
Potri.016G054700 Populus trichocarpa HOM05D000527 ORTHO05D000559 1.3e-13 81.3 97 47.4
RcHm_v2.0_Chr3g0481621 Rosa chinensis HOM05D000527 ORTHO05D000559 1.3e-13 81.3 64 60.9
Actinidia17242 Actinidia chinensis HOM05D000527 ORTHO05D000559 1.7e-13 80.9 105 44.8
MSTRG.26118 Avicennia marina HOM05D000527 ORTHO05D000559 1.7e-13 80.9 65 56.9
Hma1.2p1_0696F.1_g204720 Hydrangea macrophylla HOM05D000527 ORTHO05D000559 1.7e-13 80.9 97 48.5
Phvul.001G135200 Phaseolus vulgaris HOM05D000527 ORTHO05D000559 1.7e-13 80.9 97 46.4
Sed0013764 Sechium edule HOM05D000527 ORTHO05D000559 1.7e-13 80.9 55 69.1
Ciclev10004372m.g Citrus clementina HOM05D000527 ORTHO05D000559 2.8e-13 80.1 97 46.4
CsaV3_4G011820 Cucumis sativus L. HOM05D000527 ORTHO05D000559 2.8e-13 80.1 64 59.4
DCAR_013594 Daucus carota HOM05D000527 ORTHO05D000559 2.8e-13 80.1 49 75.5
Dinv39589 Davidia involucrata HOM05D000527 ORTHO05D000559 2.8e-13 80.1 97 48.5
FAN02G0940 Fragaria x ananassa HOM05D000527 ORTHO05D000559 2.8e-13 80.1 55 65.5
Manes.09G024300 Manihot esculenta HOM05D000527 ORTHO05D000559 2.8e-13 80.1 97 47.4
TPR.G29624 Trifolium pratense HOM05D000527 ORTHO05D016743 2.8e-13 80.1 56 62.5
AUR62024430 Chenopodium quinoa HOM05D000527 ORTHO05D000559 3.7e-13 79.7 46 78.3
AUR62026023 Chenopodium quinoa HOM05D000527 ORTHO05D000559 3.7e-13 79.7 46 78.3
FvH4_6g23550 Fragaria vesca HOM05D000527 ORTHO05D000559 3.7e-13 79.7 55 65.5
FAN14G2512 Fragaria x ananassa HOM05D000527 ORTHO05D000559 3.7e-13 79.7 55 65.5
Lsat_1_v5_gn_5_162541 Lactuca sativa HOM05D000527 ORTHO05D000559 3.7e-13 79.7 97 48.5
MD12G1077900 Malus domestica HOM05D000527 ORTHO05D016743 3.7e-13 79.7 97 47.4
PSO541G4785 Papaver somniferum HOM05D000527 ORTHO05D000559 3.7e-13 79.7 54 68.5
FAN09G1946 Fragaria x ananassa HOM05D000527 ORTHO05D000559 6.3e-13 79.0 55 65.5
COL.COLO4_28216 Corchorus olitorius HOM05D000527 ORTHO05D000559 8.2e-13 78.6 97 47.4
Migut.K00079 Erythranthe guttata HOM05D000527 ORTHO05D000559 8.2e-13 78.6 55 65.5
Oeu000817.1 Olea europaea HOM05D000527 ORTHO05D000559 8.2e-13 78.6 64 59.4
SHI26317 Sapria himalayana HOM05D000527 ORTHO05D000559 8.2e-13 78.6 108 45.4
CANSAT80G2363 Cannabis sativa HOM05D000527 ORTHO05D000559 1.1e-12 78.2 97 46.4
CSS0043340 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D000559 1.4e-12 77.8 97 45.4
Migut.J01768 Erythranthe guttata HOM05D000527 ORTHO05D000559 1.4e-12 77.8 65 55.4
MD14G1070200 Malus domestica HOM05D000527 ORTHO05D000559 1.4e-12 77.8 97 45.4
Rhsim04G0100900 Rhododendron simsii HOM05D000527 ORTHO05D000559 1.4e-12 77.8 97 46.4
Thecc.05G158600 Theobroma cacao HOM05D000527 ORTHO05D000559 1.4e-12 77.8 97 46.4
TWI53G0822 Tripterygium wilfordii HOM05D000527 ORTHO05D000559 1.4e-12 77.8 97 45.4
Duzib093G2223 Durio zibethinus HOM05D000527 ORTHO05D000559 1.8e-12 77.4 97 45.4
Nn2g15339 Nelumbo nucifera HOM05D000527 ORTHO05D000559 1.8e-12 77.4 55 65.5
CANSAT80G1463 Cannabis sativa HOM05D000527 ORTHO05D000559 2.4e-12 77.0 97 45.4
CAN.G77.6 Capsicum annuum HOM05D000527 ORTHO05D000559 2.4e-12 77.0 67 58.2
Medtr7g091880 Medicago truncatula HOM05D000527 ORTHO05D000559 2.4e-12 77.0 97 45.4
QL07p020877 Quercus lobata HOM05D000527 ORTHO05D000559 2.4e-12 77.0 97 46.4
SalBow1G7741 Salvia bowleyana HOM05D000527 ORTHO05D000559 2.4e-12 77.0 64 57.8
SEGI_00341 Sequoiadendron giganteum HOM05D000527 ORTHO05D000559 2.4e-12 77.0 54 68.5
SEGI_23329 Sequoiadendron giganteum HOM05D000527 ORTHO05D000559 2.4e-12 77.0 54 68.5
TPR.G36002 Trifolium pratense HOM05D000527 ORTHO05D016743 2.4e-12 77.0 65 55.4
TAR623G0455 Trochodendron aralioides HOM05D000527 ORTHO05D000559 2.4e-12 77.0 55 65.5
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 3.1e-12 76.6 56 60.7
VMungo0720G2802 Vigna mungo HOM05D000527 ORTHO05D000559 3.1e-12 76.6 101 43.6
Gorai.002G147800 Gossypium raimondii HOM05D000527 ORTHO05D000559 4.1e-12 76.3 97 46.4
Sopen03g013100 Solanum pennellii HOM05D000527 ORTHO05D000559 4.1e-12 76.3 49 69.4
Aqoxy2G00191 Aquilegia oxysepala HOM05D000527 ORTHO05D000559 5.3e-12 75.9 55 63.6
TPR.G29480 Trifolium pratense HOM05D000527 ORTHO05D000559 5.3e-12 75.9 98 43.9
CiPaw.10G032300 Carya illinoinensis HOM05D000527 ORTHO05D000559 6.9e-12 75.5 97 47.4
Gohir.D01G121100 Gossypium hirsutum HOM05D000527 ORTHO05D000559 6.9e-12 75.5 97 46.4
Psat3g072120 Pisum sativum HOM05D000527 ORTHO05D000559 6.9e-12 75.5 65 55.4
THA.LOC104802186 Tarenaya hassleriana HOM05D000527 ORTHO05D000559 6.9e-12 75.5 97 46.4
Ah.04g151640 Amaranthus hybridus HOM05D000527 ORTHO05D000559 9.1e-12 75.1 46 73.9
MSTRG.6436 Avicennia marina HOM05D000527 ORTHO05D000559 9.1e-12 75.1 65 55.4
Cpa.g.sc92.35 Carica papaya HOM05D000527 ORTHO05D000559 1.2e-11 74.7 97 46.4
Oeu064309.1 Olea europaea HOM05D000527 ORTHO05D000559 1.2e-11 74.7 65 56.9
Cfa016838 Carpinus fangiana HOM05D000527 ORTHO05D000559 1.5e-11 74.3 97 46.4
Haze_19881 Corylus avellana HOM05D000527 ORTHO05D000559 1.5e-11 74.3 97 46.4
Haze_19889 Corylus avellana HOM05D000527 ORTHO05D000559 1.5e-11 74.3 97 46.4
Gohir.A01G132000 Gossypium hirsutum HOM05D000527 ORTHO05D000559 2.0e-11 73.9 97 45.4
Oeu033147.3 Olea europaea HOM05D000527 ORTHO05D000559 2.0e-11 73.9 64 56.2
Sc13g0001840 Simmondsia chinensis HOM05D000527 ORTHO05D000559 2.0e-11 73.9 97 44.3
Ca_23906_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 2.6e-11 73.6 101 40.6
Oeu032994.1 Olea europaea HOM05D000527 ORTHO05D000559 2.6e-11 73.6 64 56.2
EL10Ac3g07070 Beta vulgaris HOM05D000527 ORTHO05D000559 3.4e-11 73.2 46 71.7
Manes.08G049600 Manihot esculenta HOM05D000527 ORTHO05D000559 3.4e-11 73.2 97 47.4
TPR.G27780 Trifolium pratense HOM05D000527 ORTHO05D016743 3.4e-11 73.2 59 52.5
Duzib128G1605 Durio zibethinus HOM05D000527 ORTHO05D000559 4.5e-11 72.8 97 43.3
Medtr1g052515 Medicago truncatula HOM05D000527 ORTHO05D000559 4.5e-11 72.8 101 39.6
Prupe.7G064000 Prunus persica HOM05D000527 ORTHO05D000559 4.5e-11 72.8 97 44.3
Hund19156 Selenicereus undatus HOM05D000527 ORTHO05D000559 4.5e-11 72.8 46 76.1
HPP92_010188 Vanilla planifolia HOM05D000527 ORTHO05D000559 5.9e-11 72.4 55 58.2
THA.LOC104824451 Tarenaya hassleriana HOM05D000527 ORTHO05D000559 6.5e-10 68.9 65 56.9
TAR633G2351 Trochodendron aralioides HOM05D000527 ORTHO05D000559 6.5e-10 68.9 55 61.8
SGA_v2.0_scaffold94G28466 Striga asiatica HOM05D000527 ORTHO05D000559 2.5e-09 67.0 68 51.5
Aa31LG10G12350 Aethionema arabicum HOM05D000527 ORTHO05D000559 4.2e-09 66.2 97 42.3
Sp5g05070 Schrenkiella parvula HOM05D000527 ORTHO05D000559 4.2e-09 66.2 97 43.3
Zm00001eb061880 Zea mays HOM05D000527 ORTHO05D000559 4.2e-09 66.2 55 56.4
ATR0332G116 Amborella trichopoda HOM05D000527 ORTHO05D000559 7.2e-09 65.5 54 59.3
Thhalv10005800m.g Eutrema salsugineum HOM05D000527 ORTHO05D000559 2.1e-08 63.9 97 42.3
Os03g0808900 Oryza sativa ssp. japonica HOM05D000527 ORTHO05D000559 2.1e-08 63.9 55 54.5
arahy.Tifrunner.gnm1.ann1.82P426 Arachis hypogaea HOM05D000527 ORTHO05D000559 7.9e-08 62.0 55 50.9
BolC8t50905H Brassica oleracea HOM05D000527 ORTHO05D000559 7.9e-08 62.0 97 42.3
A09p50380 Brassica napus HOM05D000527 ORTHO05D000559 1.0e-07 61.6 109 40.4
AL5G39100 Arabidopsis lyrata HOM05D000527 ORTHO05D000559 1.4e-07 61.2 97 41.2
Carub.0005s2436 Capsella rubella HOM05D000527 ORTHO05D000559 1.4e-07 61.2 97 41.2
AT3G57520 Arabidopsis thaliana HOM05D000527 ORTHO05D000559 2.3e-07 60.5 97 40.2
C08p33050 Brassica napus HOM05D000527 ORTHO05D000559 2.3e-07 60.5 97 41.2
BraA09t40490Z Brassica rapa HOM05D000527 ORTHO05D000559 2.3e-07 60.5 97 41.2
CARHR167740 Cardamine hirsuta HOM05D000527 ORTHO05D000559 2.3e-07 60.5 97 40.2
arahy.Tifrunner.gnm1.ann1.3HRB74 Arachis hypogaea HOM05D000527 ORTHO05D000559 3.0e-07 60.1 97 36.1
BcaC07g40373 Brassica carinata HOM05D000527 ORTHO05D000559 8.8e-07 58.5 99 41.4
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 1.1e-06 58.2 76 39.5
BcaB04g16931 Brassica carinata HOM05D000527 ORTHO05D000559 2.0e-06 57.4 57 50.9
Os07g0209100 Oryza sativa ssp. japonica HOM05D000527 ORTHO05D000559 2.0e-06 57.4 46 54.3
SEGI_03115 Sequoiadendron giganteum HOM05D000527 ORTHO05D000559 2.0e-06 57.4 49 51.0
A08p00350 Brassica napus HOM05D000527 ORTHO05D000559 5.7e-06 55.8 57 49.1
BraA08t32093Z Brassica rapa HOM05D000527 ORTHO05D000559 5.7e-06 55.8 57 49.1
MELO3C010314.2 Cucumis melo HOM05D000527 ORTHO05D000559 5.7e-06 55.8 97 37.1
CsaV3_1G026710 Cucumis sativus L. HOM05D000527 ORTHO05D000559 5.7e-06 55.8 97 37.1


User provided reference genes

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