Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 1.1e-226 789.6 405 100.0
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 3.5e-172 608.6 328 91.5
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 1.0e-171 607.1 328 90.9
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.3e-171 605.9 328 91.2
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.3e-171 605.9 328 91.2
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.3e-171 605.9 328 91.2
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.1e-170 603.6 328 90.9
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.1e-170 603.6 328 89.9
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 3.3e-170 602.1 327 90.8
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 3.3e-170 602.1 328 90.5
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 7.3e-170 600.9 328 90.5
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 7.3e-170 600.9 328 89.6
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 7.3e-170 600.9 328 90.5
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 7.3e-170 600.9 328 89.3
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 9.5e-170 600.5 328 90.2
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 9.5e-170 600.5 328 89.9
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 9.5e-170 600.5 328 89.9
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 1.2e-169 600.1 328 89.9
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 1.6e-169 599.7 328 89.9
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 2.1e-169 599.4 328 89.9
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 2.1e-169 599.4 329 89.1
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 2.8e-169 599.0 328 89.9
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 3.6e-169 598.6 328 90.2
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 6.1e-169 597.8 324 90.1
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 1.4e-168 596.7 328 89.9
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 1.4e-168 596.7 328 88.4
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 2.3e-168 595.9 328 88.7
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 2.3e-168 595.9 329 90.0
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 3.0e-168 595.5 328 89.3
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 6.8e-168 594.3 328 88.7
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 8.9e-168 594.0 328 88.7
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 8.9e-168 594.0 327 89.9
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 8.9e-168 594.0 328 89.0
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 1.2e-167 593.6 325 89.5
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 1.2e-167 593.6 324 90.7
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 1.5e-167 593.2 325 89.8
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 2.0e-167 592.8 327 89.9
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 2.0e-167 592.8 328 88.7
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.0e-167 592.8 327 89.6
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 3.4e-167 592.0 328 88.7
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 3.4e-167 592.0 328 88.4
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 4.4e-167 591.7 327 89.6
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 4.4e-167 591.7 328 89.0
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 9.8e-167 590.5 330 88.5
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 9.8e-167 590.5 328 89.3
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 1.3e-166 590.1 328 87.8
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 1.7e-166 589.7 328 88.1
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 2.2e-166 589.3 328 89.3
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 2.9e-166 589.0 322 89.8
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 2.9e-166 589.0 328 88.4
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 3.7e-166 588.6 328 89.0
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 4.9e-166 588.2 351 83.5
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 4.9e-166 588.2 328 88.1
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 8.3e-166 587.4 328 89.0
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.8e-165 586.3 328 89.0
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.8e-165 586.3 328 87.5
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 4.1e-165 585.1 328 88.7
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 1.2e-164 583.6 328 85.7
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 1.2e-164 583.6 330 87.3
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 2.0e-164 582.8 325 89.5
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 2.0e-164 582.8 328 88.4
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 2.0e-164 582.8 365 81.6
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 2.0e-164 582.8 329 87.2
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 2.7e-164 582.4 328 86.3
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 3.5e-164 582.0 328 87.8
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 4.6e-164 581.6 328 88.4
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.3e-163 580.1 328 87.5
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.3e-163 580.1 328 87.5
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 2.3e-163 579.3 331 87.0
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 3.9e-163 578.6 325 88.0
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 3.9e-163 578.6 328 87.5
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 8.6e-163 577.4 326 86.8
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 1.1e-162 577.0 317 89.3
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 1.5e-162 576.6 328 88.1
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 1.9e-162 576.2 328 85.1
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 2.5e-162 575.9 328 87.2
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 3.3e-162 575.5 331 86.4
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 4.3e-162 575.1 328 87.2
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 7.3e-162 574.3 331 86.4
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 7.3e-162 574.3 331 86.1
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 9.5e-162 573.9 328 85.1
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.2e-161 573.5 328 85.7
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 1.2e-161 573.5 328 85.7
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 6.2e-161 571.2 328 86.3
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 1.1e-160 570.5 328 85.1
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 1.8e-160 569.7 324 86.7
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 4.0e-160 568.5 328 84.5
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 1.2e-159 567.0 328 86.9
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 1.5e-159 566.6 328 84.8
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 7.5e-159 564.3 328 84.8
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 9.8e-159 563.9 328 84.5
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.3e-158 563.5 304 92.1
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.3e-158 563.5 332 82.8
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 1.7e-158 563.1 328 83.5
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.7e-158 563.1 328 84.5
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 4.1e-157 558.5 328 83.8
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 5.4e-157 558.1 328 84.1
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 1.7e-155 553.1 357 78.2
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 5.0e-155 551.6 328 82.9
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 2.5e-154 549.3 333 81.4
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 1.4e-152 543.5 384 73.2
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 2.0e-151 539.7 328 79.9
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 5.8e-151 538.1 333 79.0
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 6.4e-150 534.6 346 78.9
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 1.9e-149 533.1 304 84.5
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 5.4e-149 531.6 327 77.7
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 3.9e-147 525.4 327 77.4
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 1.2e-145 520.4 328 81.7
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 1.4e-144 516.9 327 76.5
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 6.8e-144 514.6 327 74.6
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 4.4e-143 511.9 328 75.0
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 3.8e-142 508.8 323 77.7
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 3.2e-141 505.8 327 74.3
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 3.5e-140 502.3 332 74.1
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 1.5e-135 486.9 303 77.2
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 3.5e-132 475.7 325 71.7
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 2.0e-127 459.9 313 72.2
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 2.1e-121 439.9 328 71.0
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 5.3e-120 435.3 310 67.1
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 4.5e-119 432.2 252 83.7
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 4.2e-117 425.6 321 68.2
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 1.8e-115 420.2 249 84.3
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.0e-110 404.4 329 64.4
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 2.2e-110 403.3 228 85.1
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 2.7e-108 396.4 239 81.2
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 3.5e-108 396.0 219 89.0
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 4.6e-108 395.6 239 82.8
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 3.9e-107 392.5 223 86.1
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 3.7e-105 386.0 231 81.0
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 3.6e-100 369.4 197 92.4
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.0e-91 341.3 192 87.5
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 1.0e-91 341.3 315 56.2
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 5.7e-90 335.5 212 78.3
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 9.7e-90 334.7 182 89.6
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 3.9e-83 312.8 312 53.8
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.6e-74 283.5 171 83.0
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 5.7e-74 282.3 231 61.9
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 1.3e-70 271.2 184 67.9
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 1.7e-65 254.2 145 86.2
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.4e-59 234.6 124 92.7
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.5e-53 214.5 151 69.5
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 2.7e-47 193.7 144 63.9
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 2.9e-41 173.7 137 67.9
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 3.2e-40 170.2 102 81.4
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 1.2e-34 151.8 76 93.4
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 1.5e-34 151.4 96 78.1
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 4.1e-32 143.3 104 67.3
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 3.5e-31 140.2 74 91.9
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 1.7e-30 137.9 77 85.7
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 8.6e-30 135.6 90 78.9
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 3.6e-28 130.2 76 82.9
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 1.2e-26 125.2 127 54.3
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 9.2e-24 115.5 98 59.2
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.2e-23 115.2 108 59.3
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 8.1e-20 102.4 116 53.4
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 5.3e-19 99.8 74 64.9
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 1.2e-18 98.6 296 29.4
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 2.2e-17 94.4 225 30.2
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 5.4e-16 89.7 308 27.3
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 2.1e-15 87.8 299 29.1
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 2.7e-15 87.4 113 50.4
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 6.0e-15 86.3 268 30.6
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 8.1e-12 75.9 103 47.6
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 2.6e-10 70.9 53 69.8
DCAR_006392 Daucus carota HOM05D002986 ORTHO05D003966 2.4e-08 64.3 30 100.0
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 3.2e-08 63.9 45 68.9
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 3.2e-08 63.9 42 71.4
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 5.4e-08 63.2 220 26.4
DCAR_020537 Daucus carota HOM05D002986 ORTHO05D007587 9.3e-08 62.4 30 96.7


User provided reference genes

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