Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 9.0e-187 656.8 328 100.0
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 9.2e-115 417.5 315 62.9
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 3.5e-114 415.6 320 60.9
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 5.2e-110 401.7 327 58.4
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.9e-107 393.3 314 58.3
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 4.1e-107 392.1 329 58.4
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 4.1e-107 392.1 314 59.2
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 4.6e-106 388.7 312 58.0
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 6.0e-106 388.3 313 58.5
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 1.7e-105 386.7 328 58.2
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 3.9e-105 385.6 323 55.4
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 6.6e-105 384.8 309 57.6
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 7.3e-104 381.3 309 57.9
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 7.3e-104 381.3 324 57.7
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 9.6e-104 380.9 312 56.1
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 2.1e-103 379.8 309 57.6
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 2.8e-103 379.4 314 56.7
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 3.6e-103 379.0 327 58.1
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 1.1e-102 377.5 313 55.6
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 1.8e-102 376.7 306 57.2
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 4.0e-102 375.6 310 61.0
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 5.2e-102 375.2 314 56.1
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 1.5e-101 373.6 308 57.1
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 2.6e-101 372.9 314 55.7
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 4.4e-101 372.1 196 98.5
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 4.4e-101 372.1 316 57.3
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 7.6e-101 371.3 310 56.1
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 7.6e-101 371.3 313 55.6
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 7.6e-101 371.3 309 57.0
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 1.3e-100 370.5 309 56.0
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 2.9e-100 369.4 313 55.0
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 4.9e-100 368.6 313 58.5
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 6.4e-100 368.2 316 56.6
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 1.1e-99 367.5 314 55.1
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 1.4e-99 367.1 310 59.0
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 1.9e-99 366.7 309 56.6
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 2.4e-99 366.3 317 54.6
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 7.1e-99 364.8 309 54.4
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 6.0e-98 361.7 319 54.2
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 2.3e-97 359.8 312 55.4
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 8.7e-97 357.8 314 55.7
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 3.3e-96 355.9 317 53.6
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 7.3e-96 354.8 325 52.9
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 1.6e-95 353.6 309 54.7
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 6.2e-95 351.7 313 54.6
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 4.0e-94 349.0 326 50.9
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 9.0e-94 347.8 338 51.5
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 7.6e-93 344.7 319 53.6
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 5.4e-91 338.6 311 54.3
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 7.1e-91 338.2 320 53.1
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 9.3e-91 337.8 316 50.3
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.6e-90 337.0 275 62.2
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 3.5e-90 335.9 311 52.1
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 4.6e-90 335.5 275 62.5
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 1.7e-89 333.6 312 49.7
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 2.8e-87 326.2 328 48.2
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 3.1e-86 322.8 273 55.7
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 9.0e-86 321.2 310 55.5
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 4.9e-84 315.5 296 52.0
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 9.3e-83 311.2 313 47.6
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 3.5e-82 309.3 313 49.2
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 2.3e-81 306.6 317 53.9
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 4.0e-78 295.8 316 44.9
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 5.3e-78 295.4 290 49.7
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 6.9e-78 295.0 316 46.2
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 6.9e-78 295.0 322 50.0
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 2.0e-77 293.5 297 51.5
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 3.4e-77 292.7 252 54.4
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 4.9e-76 288.9 309 45.0
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 2.7e-74 283.1 267 53.9
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 6.7e-73 278.5 281 48.0
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 1.7e-68 263.8 320 40.6
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 2.5e-67 260.0 331 42.3
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 7.9e-58 228.4 285 43.2
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 6.7e-57 225.3 322 35.4
FAN04G2384 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.7e-50 203.4 208 57.2
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 4.8e-47 192.6 183 50.8
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 9.4e-43 178.3 167 55.1
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 5.7e-40 169.1 171 50.3
CSS0011551 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 3.1e-38 163.3 104 71.2
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 1.7e-36 157.5 155 47.7
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 4.0e-33 146.4 164 44.5
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 6.3e-23 112.5 171 39.8
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 5.2e-17 92.8 96 50.0
Ah.15g094020 Amaranthus hybridus HOM05D000032 ORTHO05D009383 1.8e-14 84.3 74 55.4
AUR62001157 Chenopodium quinoa HOM05D000032 ORTHO05D009383 7.0e-14 82.4 64 57.8
unitig_0.g181 Utricularia gibba HOM05D000032 ORTHO05D009383 7.0e-14 82.4 81 48.1
VMungo0464G1688 Vigna mungo HOM05D000032 ORTHO05D009383 9.2e-14 82.0 71 53.5
FvH4_6g35850 Fragaria vesca HOM05D000032 ORTHO05D009383 1.2e-13 81.6 59 54.2
FAN14G3162 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.2e-13 81.6 59 54.2
FAN14G3671 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.2e-13 81.6 59 54.2
FAN02G2103 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.6e-13 81.3 59 54.2
FAN05G0348 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.6e-13 81.3 59 54.2
Glyma.02G068300 Glycine max HOM05D000032 ORTHO05D009383 1.6e-13 81.3 56 64.3
Sp3g00020 Schrenkiella parvula HOM05D000032 ORTHO05D009383 1.6e-13 81.3 59 54.2
Sc14g0008440 Simmondsia chinensis HOM05D000032 ORTHO05D009383 1.6e-13 81.3 64 53.1
Lsat_1_v5_gn_2_101321 Lactuca sativa HOM05D000032 ORTHO05D009383 2.0e-13 80.9 76 52.6
EL10Ac7g17945 Beta vulgaris HOM05D000032 ORTHO05D009383 2.7e-13 80.5 73 54.8
AL3G10020 Arabidopsis lyrata HOM05D000032 ORTHO05D009383 3.5e-13 80.1 57 57.9
AUR62016519 Chenopodium quinoa HOM05D000032 ORTHO05D009383 3.5e-13 80.1 58 60.3
Cc01_g03330 Coffea canephora HOM05D000032 ORTHO05D009383 3.5e-13 80.1 76 48.7
MSTRG.18394 Avicennia marina HOM05D000032 ORTHO05D009383 4.6e-13 79.7 57 57.9
Cfa010055 Carpinus fangiana HOM05D001005 ORTHO05D000836 4.6e-13 79.7 60 55.0
DCAR_008449 Daucus carota HOM05D000032 ORTHO05D009383 4.6e-13 79.7 55 61.8
RcHm_v2.0_Chr2g0147891 Rosa chinensis HOM05D000032 ORTHO05D009383 4.6e-13 79.7 48 66.7
Glyma.16G149800 Glycine max HOM05D000032 ORTHO05D009383 7.8e-13 79.0 56 62.5
Hma1.2p1_0098F.1_g048240 Hydrangea macrophylla HOM05D000032 ORTHO05D009383 1.0e-12 78.6 61 55.7
CARHR074860 Cardamine hirsuta HOM05D000032 ORTHO05D009383 1.3e-12 78.2 58 56.9
Ca_04506_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009383 1.3e-12 78.2 71 50.7
Eucgr.K02338 Eucalyptus grandis HOM05D000032 ORTHO05D009383 1.3e-12 78.2 57 56.1
Eucgr.L03255 Eucalyptus grandis HOM05D000032 ORTHO05D009383 1.3e-12 78.2 57 56.1
vmacro21760 Vaccinium macrocarpon HOM05D000032 ORTHO05D009383 1.7e-12 77.8 79 45.6
FAN09G2555 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.3e-12 77.4 59 52.5
PGSC0003DMG400032150 Solanum tuberosum HOM05D000032 ORTHO05D009383 2.3e-12 77.4 76 50.0
TWI32G0219 Tripterygium wilfordii HOM05D000032 ORTHO05D009383 2.3e-12 77.4 59 52.5
AT3G02065 Arabidopsis thaliana HOM05D000032 ORTHO05D009383 3.0e-12 77.0 57 56.1
Cpa.g.sc17.215 Carica papaya HOM05D000032 ORTHO05D009383 3.9e-12 76.6 56 57.1
CSS0028588 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 5.0e-12 76.3 59 54.2
Medtr6g033070 Medicago truncatula HOM05D000032 ORTHO05D009383 5.0e-12 76.3 56 57.1
Nn3g18407 Nelumbo nucifera HOM05D000032 ORTHO05D009383 5.0e-12 76.3 63 55.6
Solyc01g006340.3 Solanum lycopersicum HOM05D000032 ORTHO05D009383 5.0e-12 76.3 76 51.3
CBR_g3873 Chara braunii HOM05D000032 ORTHO05D009383 6.6e-12 75.9 68 48.5
Haze_07890 Corylus avellana HOM05D007638 ORTHO05D009805 6.6e-12 75.9 37 83.8
HanXRQChr14g0453351 Helianthus annuus HOM05D000032 ORTHO05D009383 6.6e-12 75.9 62 51.6
Lalb_Chr03g0043781 Lupinus albus HOM05D000032 ORTHO05D009383 6.6e-12 75.9 43 69.8
Prupe.3G315400 Prunus persica HOM05D001005 ORTHO05D000836 6.6e-12 75.9 48 60.4
Sopen01g002340 Solanum pennellii HOM05D000032 ORTHO05D009383 6.6e-12 75.9 76 50.0
AagrBONN_evm.TU.Sc2ySwM_369.192 Anthoceros agrestis HOM05D000032 ORTHO05D009383 8.6e-12 75.5 50 64.0
PGR044G2709 Punica granatum HOM05D000032 ORTHO05D009383 8.6e-12 75.5 98 39.8
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 8.6e-12 75.5 58 55.2
SGA_v2.0_scaffold8G04635 Striga asiatica HOM05D000032 ORTHO05D009383 8.6e-12 75.5 71 49.3
THA.LOC104823368 Tarenaya hassleriana HOM05D000032 ORTHO05D009383 8.6e-12 75.5 52 53.8
GSVIVG01032945001 Vitis vinifera HOM05D007638 ORTHO05D009383 8.6e-12 75.5 49 63.3
Zm00001eb235630 Zea mays HOM05D000032 ORTHO05D009383 8.6e-12 75.5 71 46.5
arahy.Tifrunner.gnm1.ann1.BLPY9G Arachis hypogaea HOM05D007638 ORTHO05D009383 1.1e-11 75.1 56 62.5
CiPaw.14G093500 Carya illinoinensis HOM05D000032 ORTHO05D009383 1.1e-11 75.1 53 54.7
Nitab4.5_0003436g0100 Nicotiana tabacum HOM05D000032 ORTHO05D009383 1.1e-11 75.1 76 48.7
PSO384G0785 Papaver somniferum HOM05D000032 ORTHO05D009383 1.1e-11 75.1 52 59.6
TPR.G6050 Trifolium pratense HOM05D000032 ORTHO05D009383 1.5e-11 74.7 73 45.2
Carub.0003s0002 Capsella rubella HOM05D000032 ORTHO05D009383 1.9e-11 74.3 56 55.4
Lj1A470G20 Lonicera japonica HOM05D000032 ORTHO05D009383 1.9e-11 74.3 60 51.7
Lj1A478G35 Lonicera japonica HOM05D000032 ORTHO05D009383 1.9e-11 74.3 60 51.7
MBI11_g17278_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D009383 1.9e-11 74.3 58 53.4
arahy.Tifrunner.gnm1.ann1.8UB6M3 Arachis hypogaea HOM05D000032 ORTHO05D009383 3.3e-11 73.6 54 63.0
Thhalv10020567m.g Eutrema salsugineum HOM05D000032 ORTHO05D009383 3.3e-11 73.6 56 51.8
Manes.04G096700 Manihot esculenta HOM05D000032 ORTHO05D009383 3.3e-11 73.6 59 50.8
PSO339G1569 Papaver somniferum HOM05D000032 ORTHO05D009383 3.3e-11 73.6 63 52.4
Aa31LG5G11250 Aethionema arabicum HOM05D000032 ORTHO05D009383 4.3e-11 73.2 55 50.9
Aqoxy7G03583 Aquilegia oxysepala HOM05D000032 ORTHO05D009383 4.3e-11 73.2 53 56.6
ATR0824G065 Amborella trichopoda HOM05D000032 ORTHO05D009383 5.6e-11 72.8 58 53.4
CDE07G0397 Ceratophyllum demersum HOM05D000032 ORTHO05D009383 5.6e-11 72.8 43 65.1
Psat1g014560 Pisum sativum HOM05D000032 ORTHO05D009383 5.6e-11 72.8 71 46.5
Atru.chr12.440 Acer truncatum HOM05D000032 ORTHO05D009383 7.3e-11 72.4 48 62.5
Migut.D00539 Erythranthe guttata HOM05D000032 ORTHO05D009383 7.3e-11 72.4 67 44.8
Peaxi162Scf00192g00012 Petunia axillaris HOM05D000032 ORTHO05D009383 7.3e-11 72.4 55 52.7
Pp3c8_12050 Physcomitrium patens HOM05D000032 ORTHO05D009383 7.3e-11 72.4 49 61.2
Lj3g0015614 Lotus japonicus HOM05D000032 ORTHO05D009383 9.5e-11 72.0 56 51.8
arahy.Tifrunner.gnm1.ann1.U3NDHF Arachis hypogaea HOM05D000032 ORTHO05D009383 1.2e-10 71.6 65 53.8
ClCG05G012450 Citrullus lanatus HOM05D000032 ORTHO05D009383 1.2e-10 71.6 86 39.5
CsaV3_3G020080 Cucumis sativus L. HOM05D000032 ORTHO05D009383 1.2e-10 71.6 59 52.5
CSS0019503 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 1.6e-10 71.2 48 56.2
MD17G1003800 Malus domestica HOM05D000032 ORTHO05D009383 1.6e-10 71.2 48 58.3
Potri.014G140100 Populus trichocarpa HOM05D000032 ORTHO05D009383 1.6e-10 71.2 50 58.0
Ciclev10017882m.g Citrus clementina HOM05D000032 ORTHO05D009383 2.1e-10 70.9 51 58.8
MELO3C014755.2 Cucumis melo HOM05D000032 ORTHO05D009383 2.1e-10 70.9 41 65.9
QL02p068178 Quercus lobata HOM05D000032 ORTHO05D009383 2.1e-10 70.9 48 58.3
TAR633G1362 Trochodendron aralioides HOM05D000032 ORTHO05D009383 2.1e-10 70.9 57 54.4
CAN.G140.9 Capsicum annuum HOM05D000032 ORTHO05D009383 3.6e-10 70.1 74 47.3
Thecc.04G052100 Theobroma cacao HOM05D000032 ORTHO05D009383 3.6e-10 70.1 47 55.3
Duzib187G1127 Durio zibethinus HOM05D000032 ORTHO05D009383 4.7e-10 69.7 55 50.9
ECA238G2389 Erigeron canadensis HOM05D000032 ORTHO05D009383 4.7e-10 69.7 58 51.7
COL.COLO4_13406 Corchorus olitorius HOM05D000032 ORTHO05D009383 8.0e-10 68.9 41 63.4
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 8.0e-10 68.9 54 51.9
Gohir.D10G081800 Gossypium hirsutum HOM05D000032 ORTHO05D009383 1.4e-09 68.2 48 56.2
Sabra14G0105500 Salix brachista HOM05D000032 ORTHO05D009383 1.4e-09 68.2 50 56.0
Gohir.A10G069700 Gossypium hirsutum HOM05D000032 ORTHO05D009383 2.3e-09 67.4 48 54.2
Haze_14989 Corylus avellana HOM05D000032 ORTHO05D009383 5.2e-09 66.2 68 48.5
Gorai.011G088700 Gossypium raimondii HOM05D000032 ORTHO05D009383 6.8e-09 65.9 47 51.1
EL10Ac9g22788 Beta vulgaris HOM05D000032 ORTHO05D009383 1.2e-08 65.1 91 40.7
SHI50144 Sapria himalayana HOM05D000032 ORTHO05D009383 2.0e-08 64.3 36 63.9
SMO201G0222 Selaginella moellendorffii HOM05D000032 ORTHO05D009383 4.9e-07 59.7 42 61.9
CSS0012229 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 8.3e-07 58.9 62 46.8
Actinidia01839 Actinidia chinensis HOM05D000032 ORTHO05D009383 4.1e-06 56.6 38 63.2


User provided reference genes

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