Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007676 Daucus carota HOM05D000989 ORTHO05D006109 2.5e-78 295.4 154 100.0
Hma1.2p1_0141F.1_g064000 Hydrangea macrophylla HOM05D000989 ORTHO05D006109 2.6e-35 152.5 140 57.1
Actinidia38817 Actinidia chinensis HOM05D000989 ORTHO05D006109 1.3e-34 150.2 145 57.2
FvH4_6g36480 Fragaria vesca HOM05D000989 ORTHO05D006109 2.2e-34 149.4 145 58.6
FAN14G2118 Fragaria x ananassa HOM05D000989 ORTHO05D006109 2.2e-34 149.4 145 58.6
GSVIVG01029461001 Vitis vinifera HOM05D000989 ORTHO05D006109 3.7e-34 148.7 147 58.5
Dinv20318 Davidia involucrata HOM05D000989 ORTHO05D006109 4.9e-34 148.3 145 53.8
HanXRQChr09g0277441 Helianthus annuus HOM05D000989 ORTHO05D006109 6.4e-34 147.9 143 55.2
Thecc.06G052000 Theobroma cacao HOM05D000989 ORTHO05D006109 5.4e-33 144.8 145 56.6
Duzib192G0753 Durio zibethinus HOM05D000989 ORTHO05D006109 1.2e-32 143.7 145 56.6
Prupe.3G027000 Prunus persica HOM05D000989 ORTHO05D006109 1.2e-32 143.7 145 53.1
Atru.chr3.4104 Acer truncatum HOM05D000989 ORTHO05D006109 1.6e-32 143.3 147 55.8
Gohir.A05G116032 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.6e-32 143.3 145 55.2
FAN02G4168 Fragaria x ananassa HOM05D000989 ORTHO05D006109 2.1e-32 142.9 159 55.3
RcHm_v2.0_Chr2g0148611 Rosa chinensis HOM05D000989 ORTHO05D006109 2.1e-32 142.9 148 57.4
Haze_16237 Corylus avellana HOM05D000989 ORTHO05D006109 2.7e-32 142.5 145 53.8
Gorai.009G120600 Gossypium raimondii HOM05D000989 ORTHO05D006109 2.7e-32 142.5 145 54.5
TWI12G0396 Tripterygium wilfordii HOM05D000989 ORTHO05D006109 3.5e-32 142.1 145 51.7
PGR102G0324 Punica granatum HOM05D000989 ORTHO05D006109 7.8e-32 141.0 151 53.0
Gohir.D05G116600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.7e-31 139.8 145 53.8
Lj5A20T31 Lonicera japonica HOM05D000989 ORTHO05D006109 2.3e-31 139.4 140 55.7
Nitab4.5_0000499g0090 Nicotiana tabacum HOM05D000989 ORTHO05D006109 2.3e-31 139.4 145 51.0
CAN.G790.1 Capsicum annuum HOM05D000989 ORTHO05D006109 3.0e-31 139.0 145 49.0
Sabra07G0002000 Salix brachista HOM05D000989 ORTHO05D006109 3.0e-31 139.0 147 53.7
FAN09G3581 Fragaria x ananassa HOM05D000989 ORTHO05D006109 3.9e-31 138.7 159 55.3
Glyma.07G001000 Glycine max HOM05D000989 ORTHO05D006109 3.9e-31 138.7 147 53.1
CSS0036335 Camellia sinensis var. sinensis HOM05D000989 ORTHO05D006109 5.1e-31 138.3 139 55.4
Cfa023514 Carpinus fangiana HOM05D000989 ORTHO05D006109 5.1e-31 138.3 145 53.8
QL05p085514 Quercus lobata HOM05D000989 ORTHO05D006109 6.6e-31 137.9 145 55.9
FAN05G4662 Fragaria x ananassa HOM05D000989 ORTHO05D006109 8.6e-31 137.5 154 56.5
Glyma.08G226000 Glycine max HOM05D000989 ORTHO05D006109 8.6e-31 137.5 147 53.1
Sopen03g041790 Solanum pennellii HOM05D000989 ORTHO05D006109 1.1e-30 137.1 146 50.7
Sed0020073 Sechium edule HOM05D000989 ORTHO05D006109 1.9e-30 136.3 141 55.3
AUR62001309 Chenopodium quinoa HOM05D000989 ORTHO05D006109 3.3e-30 135.6 146 52.7
Ciclev10028538m.g Citrus clementina HOM05D000989 ORTHO05D006109 3.3e-30 135.6 143 52.4
SalBow6G4719 Salvia bowleyana HOM05D000989 ORTHO05D006109 3.3e-30 135.6 145 51.0
Solyc03g124060.3 Solanum lycopersicum HOM05D000989 ORTHO05D006109 4.3e-30 135.2 146 50.0
COL.COLO4_19515 Corchorus olitorius HOM05D000989 ORTHO05D006109 5.6e-30 134.8 145 51.7
Manes.14G000100 Manihot esculenta HOM05D000989 ORTHO05D006109 7.3e-30 134.4 143 51.7
MD09G1168600 Malus domestica HOM05D000989 ORTHO05D006109 9.6e-30 134.0 145 51.7
CiPaw.01G093100 Carya illinoinensis HOM05D000989 ORTHO05D006109 1.2e-29 133.7 145 50.3
CsaV3_3G020170 Cucumis sativus L. HOM05D000989 ORTHO05D006109 1.2e-29 133.7 139 54.7
TAR626G0219 Trochodendron aralioides HOM05D000989 ORTHO05D006109 1.2e-29 133.7 147 53.7
TAR626G0832 Trochodendron aralioides HOM05D000989 ORTHO05D006109 1.2e-29 133.7 147 53.7
Lj3g0006607 Lotus japonicus HOM05D000989 ORTHO05D006109 1.6e-29 133.3 145 53.1
SGA_v2.0_scaffold122G33258 Striga asiatica HOM05D000989 ORTHO05D006109 1.6e-29 133.3 145 49.0
Eucgr.F04053 Eucalyptus grandis HOM05D000989 ORTHO05D006109 2.1e-29 132.9 145 51.7
PSO063G2540 Papaver somniferum HOM05D000989 ORTHO05D006109 2.1e-29 132.9 142 50.7
MELO3C023731.2 Cucumis melo HOM05D000989 ORTHO05D006109 2.8e-29 132.5 139 54.7
Phvul.010G165300 Phaseolus vulgaris HOM05D000989 ORTHO05D006109 2.8e-29 132.5 147 52.4
Potri.007G002700 Populus trichocarpa HOM05D000989 ORTHO05D006109 2.8e-29 132.5 147 52.4
PSO170G5971 Papaver somniferum HOM05D000989 ORTHO05D006109 3.6e-29 132.1 142 50.7
VMungo0331G0118 Vigna mungo HOM05D000989 ORTHO05D006109 3.6e-29 132.1 148 54.1
Ca_03771_v3 Cicer arietinum L. HOM05D000570 ORTHO05D001174 4.7e-29 131.7 136 53.7
Oeu035084.1 Olea europaea HOM05D000989 ORTHO05D006109 6.2e-29 131.3 145 52.4
SGA_v2.0_scaffold71G24021 Striga asiatica HOM05D000989 ORTHO05D006109 6.2e-29 131.3 145 48.3
EL10Ac7g18115 Beta vulgaris HOM05D000989 ORTHO05D006109 1.4e-28 130.2 142 49.3
Rhsim08G0251900 Rhododendron simsii HOM05D000989 ORTHO05D006109 1.4e-28 130.2 141 51.1
Peaxi162Scf00684g00414 Petunia axillaris HOM05D000989 ORTHO05D006109 3.1e-28 129.0 135 49.6
Sabra14G0002700 Salix brachista HOM05D000989 ORTHO05D006109 3.1e-28 129.0 145 50.3
Hund05662 Selenicereus undatus HOM05D000989 ORTHO05D006109 3.1e-28 129.0 148 50.0
Sabra14G0003500 Salix brachista HOM05D000989 ORTHO05D006109 5.2e-28 128.3 145 49.7
Lsat_1_v5_gn_4_106160 Lactuca sativa HOM05D000989 ORTHO05D006109 6.8e-28 127.9 139 50.4
Medtr4g005140 Medicago truncatula HOM05D000989 ORTHO05D006109 6.8e-28 127.9 145 51.0
Potri.014G001100 Populus trichocarpa HOM05D000989 ORTHO05D006109 6.8e-28 127.9 145 51.0
arahy.Tifrunner.gnm1.ann1.ECX43N Arachis hypogaea HOM05D000989 ORTHO05D006109 8.9e-28 127.5 140 50.7
Aqoxy7G02659 Aquilegia oxysepala HOM05D000989 ORTHO05D006109 1.5e-27 126.7 145 46.9
Ah.08g217990 Amaranthus hybridus HOM05D000989 ORTHO05D006109 2.6e-27 125.9 147 46.3
Nitab4.5_0004098g0010 Nicotiana tabacum HOM05D000989 ORTHO05D006109 2.6e-27 125.9 145 48.3
ClCG05G012260 Citrullus lanatus HOM05D000989 ORTHO05D006109 4.4e-27 125.2 139 51.8
MD17G1158100 Malus domestica HOM05D000989 ORTHO05D006109 4.4e-27 125.2 145 49.0
TPR.G38747 Trifolium pratense HOM05D000989 ORTHO05D006109 5.8e-27 124.8 145 49.0
Duzib235G1336 Durio zibethinus HOM05D000989 ORTHO05D006109 7.6e-27 124.4 143 51.7
Atru.chr3.4101 Acer truncatum HOM05D000989 ORTHO05D006109 9.9e-27 124.0 135 54.8
PGSC0003DMG400009197 Solanum tuberosum HOM05D000989 ORTHO05D006109 9.9e-27 124.0 146 48.6
MSTRG.11572 Avicennia marina HOM05D000989 ORTHO05D006109 1.3e-26 123.6 150 47.3
Migut.I01212 Erythranthe guttata HOM05D000989 ORTHO05D006109 1.7e-26 123.2 143 51.0
Thhalv10011546m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 2.2e-26 122.9 151 45.7
Nn8g41214 Nelumbo nucifera HOM05D000989 ORTHO05D006109 2.2e-26 122.9 147 49.7
AUR62025691 Chenopodium quinoa HOM05D000989 ORTHO05D006109 2.9e-26 122.5 139 49.6
ECA232G1648 Erigeron canadensis HOM05D000989 ORTHO05D006109 2.9e-26 122.5 134 50.0
MBI16_g00831_MAGBIO Magnolia biondii HOM05D000989 ORTHO05D006109 2.9e-26 122.5 147 47.6
ECA233G3623 Erigeron canadensis HOM05D001953 ORTHO05D006109 4.9e-26 121.7 133 50.4
Psat7g264760 Pisum sativum HOM05D000570 ORTHO05D001174 6.4e-26 121.3 135 53.3
CANSAT01G0659 Cannabis sativa HOM05D000989 ORTHO05D006109 4.2e-25 118.6 143 46.9
TAR383G0471 Trochodendron aralioides HOM05D000989 ORTHO05D006109 4.2e-25 118.6 147 50.3
Aa31LG10G220 Aethionema arabicum HOM05D000989 ORTHO05D006109 1.2e-24 117.1 141 44.0
BraSC56t46391Z Brassica rapa HOM05D000989 ORTHO05D006109 2.7e-24 115.9 152 42.1
Thhalv10020844m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 7.8e-24 114.4 145 44.8
CARHR087630 Cardamine hirsuta HOM05D000989 ORTHO05D006109 1.3e-23 113.6 149 44.3
Sp1g41570 Schrenkiella parvula HOM05D000989 ORTHO05D006109 1.3e-23 113.6 139 44.6
Carub.0001s4457 Capsella rubella HOM05D000989 ORTHO05D006109 1.7e-23 113.2 141 44.7
Carub.0003s1239 Capsella rubella HOM05D000989 ORTHO05D006109 1.7e-23 113.2 149 45.6
THA.LOC104815704 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 3.0e-23 112.5 139 45.3
AL1G64210 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 3.9e-23 112.1 145 44.8
AL3G24790 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 1.1e-22 110.5 149 43.0
AT1G55960 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 1.5e-22 110.2 145 44.8
CARHR045700 Cardamine hirsuta HOM05D000989 ORTHO05D006109 1.5e-22 110.2 141 39.7
THA.LOC104822743 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 1.5e-22 110.2 143 44.1
BcaC08g43665 Brassica carinata HOM05D000989 ORTHO05D006109 2.5e-22 109.4 153 41.2
BolC6t36168H Brassica oleracea HOM05D000989 ORTHO05D006109 2.5e-22 109.4 153 41.2
AT3G13062 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 3.3e-22 109.0 151 42.4
Gohir.A03G088600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 5.6e-22 108.2 149 43.0
Gorai.005G119500 Gossypium raimondii HOM05D000989 ORTHO05D006109 5.6e-22 108.2 149 43.0
ATR0626G329 Amborella trichopoda HOM05D000989 ORTHO05D006109 7.3e-22 107.8 138 46.4
A03p38020 Brassica napus HOM05D000989 ORTHO05D006109 1.3e-21 107.1 145 44.1
Sc15g0001170 Simmondsia chinensis HOM05D000989 ORTHO05D006109 1.3e-21 107.1 143 46.2
C06p10850 Brassica napus HOM05D000989 ORTHO05D006109 2.1e-21 106.3 153 40.5
BraA03t12954Z Brassica rapa HOM05D000989 ORTHO05D006109 2.1e-21 106.3 147 44.9
Gohir.D02G105300 Gossypium hirsutum HOM05D000989 ORTHO05D006109 2.1e-21 106.3 149 43.0
C03p46110 Brassica napus HOM05D000989 ORTHO05D006109 2.8e-21 105.9 145 43.4
BolC3t16883H Brassica oleracea HOM05D000989 ORTHO05D006109 2.8e-21 105.9 145 43.4
Nn5g26976 Nelumbo nucifera HOM05D000989 ORTHO05D006109 2.8e-21 105.9 137 46.0
BcaB07g33179 Brassica carinata HOM05D000989 ORTHO05D006109 4.8e-21 105.1 141 44.7
Sp3g11220 Schrenkiella parvula HOM05D000989 ORTHO05D006109 4.8e-21 105.1 151 43.7
BraA01t04080Z Brassica rapa HOM05D000570 ORTHO05D006109 6.2e-21 104.8 150 43.3
A01p40460 Brassica napus HOM05D000989 ORTHO05D006109 1.1e-20 104.0 150 43.3
CDE05G3314 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 1.1e-20 104.0 138 43.5
arahy.Tifrunner.gnm1.ann1.FCN3VB Arachis hypogaea HOM05D000989 ORTHO05D006109 1.4e-20 103.6 180 38.3
Cc04_g00100 Coffea canephora HOM05D000989 ORTHO05D006109 3.1e-20 102.4 132 45.5
C01p52050 Brassica napus HOM05D000989 ORTHO05D006109 9.0e-20 100.9 150 42.7
BolC1t05148H Brassica oleracea HOM05D000989 ORTHO05D006109 9.0e-20 100.9 150 42.7
HPP92_018325 Vanilla planifolia HOM05D000989 ORTHO05D006109 1.5e-19 100.1 143 37.8
BcaC01g04007 Brassica carinata HOM05D000989 ORTHO05D006109 4.4e-19 98.6 145 42.8
CDE05G1780 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 3.8e-18 95.5 138 40.6
Os02g0468400 Oryza sativa ssp. japonica HOM05D000989 ORTHO05D006109 1.1e-17 94.0 155 37.4
Zm00001eb082000 Zea mays HOM05D000989 ORTHO05D006109 9.3e-17 90.9 150 36.7
Zm00001eb240920 Zea mays HOM05D000989 ORTHO05D006109 1.2e-16 90.5 139 36.7
vmacro18725 Vaccinium macrocarpon HOM05D000989 ORTHO05D006109 1.6e-16 90.1 254 29.9
Pp3c23_14010 Physcomitrium patens HOM05D000989 ORTHO05D006109 2.3e-15 86.3 141 39.7
SEGI_20704 Sequoiadendron giganteum HOM05D000989 ORTHO05D006109 2.3e-15 86.3 144 36.8
RcHm_v2.0_Chr1g0356301 Rosa chinensis HOM05D000989 ORTHO05D006109 1.3e-13 80.5 58 65.5
Cpa.g.sc10.6 Carica papaya HOM05D000989 ORTHO05D006109 4.0e-12 75.5 56 64.3
SMO364G0840 Selaginella moellendorffii HOM05D000989 ORTHO05D006109 7.1e-09 64.7 144 30.6
AagrBONN_evm.TU.Sc2ySwM_117.3861 Anthoceros agrestis HOM05D000989 ORTHO05D006109 7.9e-08 61.2 147 30.6
SGA_v2.0_scaffold71G24020 Striga asiatica HOM05D000011 ORTHO05D000018 2.3e-07 59.7 89 39.3
Zm00001eb043190 Zea mays HOM05D004148 ORTHO05D006109 1.1e-06 57.4 102 35.3


User provided reference genes

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