Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 3.0e-163 578.6 310 100.0
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 5.3e-72 275.4 320 54.7
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 2.7e-71 273.1 311 55.9
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 4.7e-68 262.3 231 63.6
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 1.8e-67 260.4 224 67.0
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 6.8e-67 258.5 232 64.7
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 4.4e-66 255.8 201 69.2
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 4.4e-66 255.8 164 79.3
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 5.7e-66 255.4 164 79.3
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 4.8e-65 252.3 291 55.3
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 6.3e-65 251.9 164 78.7
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 6.3e-65 251.9 164 78.7
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 8.3e-65 251.5 237 60.3
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 1.4e-64 250.8 270 58.5
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 1.4e-64 250.8 229 63.8
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 2.4e-64 250.0 169 74.6
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 7.0e-64 248.4 164 77.4
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 9.1e-64 248.1 229 62.9
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 2.0e-63 246.9 164 77.4
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 2.7e-63 246.5 232 61.6
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 1.3e-62 244.2 309 52.1
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.3e-62 243.4 164 75.0
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 5.0e-62 242.3 164 75.0
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 8.6e-62 241.5 243 58.8
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 4.2e-61 239.2 164 75.0
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 9.5e-61 238.0 222 62.6
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 1.2e-60 237.7 238 58.0
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 1.6e-60 237.3 194 70.6
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 2.1e-60 236.9 164 75.0
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 2.8e-60 236.5 311 49.8
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 8.0e-60 235.0 165 73.9
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 8.0e-60 235.0 243 59.7
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 1.0e-59 234.6 305 51.1
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 1.0e-59 234.6 215 62.3
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 4.0e-59 232.6 238 58.0
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 5.2e-59 232.3 297 51.9
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 1.5e-58 230.7 164 73.2
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 4.4e-58 229.2 312 49.0
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 5.7e-58 228.8 164 73.2
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 5.7e-58 228.8 164 72.0
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 9.8e-58 228.0 322 48.8
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 1.3e-57 227.6 162 73.5
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 1.7e-57 227.3 164 72.6
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 1.7e-57 227.3 164 72.6
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 1.7e-57 227.3 164 72.6
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.7e-57 227.3 231 60.6
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 1.7e-57 227.3 333 48.6
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 2.8e-57 226.5 221 60.2
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 3.7e-57 226.1 186 65.6
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 3.7e-57 226.1 167 71.3
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 6.3e-57 225.3 164 72.0
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 6.3e-57 225.3 191 64.9
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 8.3e-57 224.9 167 70.7
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 8.3e-57 224.9 231 58.0
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 8.3e-57 224.9 192 65.1
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.1e-56 224.6 184 66.3
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 1.8e-56 223.8 161 70.2
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 4.1e-56 222.6 267 51.3
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 4.1e-56 222.6 164 71.3
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 4.1e-56 222.6 164 71.3
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 9.2e-56 221.5 301 51.8
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 2.0e-55 220.3 231 57.6
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 3.5e-55 219.5 301 50.8
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 7.8e-55 218.4 162 69.8
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 2.3e-54 216.9 255 52.5
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 2.3e-54 216.9 252 54.8
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 2.3e-54 216.9 201 60.2
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 6.6e-54 215.3 164 69.5
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 6.6e-54 215.3 218 58.7
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 6.6e-54 215.3 303 50.8
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 1.1e-53 214.5 172 69.2
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 1.9e-53 213.8 217 57.1
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 1.9e-53 213.8 292 50.0
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 2.5e-53 213.4 313 48.2
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 4.3e-53 212.6 228 56.6
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 5.6e-53 212.2 228 56.6
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 7.3e-53 211.8 310 47.7
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 9.5e-53 211.5 159 70.4
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 1.2e-52 211.1 149 73.8
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 6.1e-52 208.8 176 63.6
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 6.1e-52 208.8 354 42.9
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 4.0e-51 206.1 289 48.4
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 6.8e-51 205.3 159 69.8
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 2.6e-50 203.4 286 49.7
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 9.8e-50 201.4 279 49.5
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 1.3e-49 201.1 169 65.7
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 6.4e-49 198.7 183 63.4
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 6.4e-49 198.7 158 67.1
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 7.0e-48 195.3 253 51.0
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 9.2e-48 194.9 169 63.9
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 9.2e-48 194.9 278 49.3
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 1.5e-45 187.6 165 63.0
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 2.5e-45 186.8 155 63.2
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 2.1e-44 183.7 178 59.0
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 2.1e-44 183.7 276 49.6
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 1.2e-42 177.9 132 68.9
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 2.6e-42 176.8 197 52.3
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 2.9e-41 173.3 270 45.9
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 3.7e-41 172.9 161 57.1
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 6.4e-41 172.2 143 62.2
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 6.4e-41 172.2 143 62.2
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.9e-40 170.6 231 50.2
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 1.9e-40 170.6 160 58.1
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 2.7e-39 166.8 162 57.4
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 2.8e-36 156.8 124 68.5
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 7.1e-32 142.1 124 64.5
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 2.3e-30 137.1 107 68.2
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 3.3e-29 133.3 168 50.6
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 2.2e-25 120.6 76 80.3
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 4.1e-24 116.3 199 39.2
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 1.7e-22 110.9 107 58.9
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 2.3e-22 110.5 160 40.6
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 2.8e-20 103.6 114 51.8
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 5.2e-19 99.4 64 78.1
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 5.8e-18 95.9 83 62.7
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 1.3e-12 78.2 112 44.6
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 3.4e-10 70.1 152 37.5
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 7.6e-10 68.9 43 76.7
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 1.3e-09 68.2 123 41.5
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 2.2e-09 67.4 183 38.3
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 2.9e-09 67.0 128 39.1
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 3.2e-08 63.5 160 40.6
arahy.Tifrunner.gnm1.ann1.24L57E Arachis hypogaea HOM05D006300 ORTHO05D007623 4.2e-08 63.2 76 53.9
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 4.6e-07 59.7 45 68.9
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.3e-06 57.4 39 74.4
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 3.0e-06 57.0 128 35.9
arahy.Tifrunner.gnm1.ann1.GTSR33 Arachis hypogaea HOM05D006300 ORTHO05D007623 5.1e-06 56.2 99 42.4


User provided reference genes

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