Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007574 Daucus carota HOM05D004380 ORTHO05D005134 1.0e-81 306.6 150 100.0
DCAR_015696 Daucus carota HOM05D004380 ORTHO05D005134 7.8e-61 237.3 149 75.2
Rhsim07G0121900 Rhododendron simsii HOM05D004380 ORTHO05D005134 6.2e-58 227.6 149 73.2
Actinidia10879 Actinidia chinensis HOM05D004380 ORTHO05D005134 8.1e-58 227.3 149 72.5
Cfa012380 Carpinus fangiana HOM05D004380 ORTHO05D005134 8.1e-58 227.3 149 72.5
TWI81G0890 Tripterygium wilfordii HOM05D004380 ORTHO05D005134 8.1e-58 227.3 149 72.5
vmacro14143 Vaccinium macrocarpon HOM05D004380 ORTHO05D005134 1.1e-57 226.9 149 73.2
GSVIVG01013206001 Vitis vinifera HOM05D004380 ORTHO05D005134 4.0e-57 224.9 149 70.5
Cc01_g02120 Coffea canephora HOM05D004380 ORTHO05D005134 5.2e-57 224.6 149 73.2
Lj6C290G5 Lonicera japonica HOM05D004380 ORTHO05D005134 8.9e-57 223.8 149 71.8
Atru.chr1.3775 Acer truncatum HOM05D004380 ORTHO05D005134 1.2e-56 223.4 149 71.8
Potri.003G087200 Populus trichocarpa HOM05D004380 ORTHO05D005134 1.2e-56 223.4 149 70.5
TPR.G23111 Trifolium pratense HOM05D004380 ORTHO05D005134 1.2e-56 223.4 150 69.3
SGA_v2.0_scaffold86G26890 Striga asiatica HOM05D004380 ORTHO05D005134 1.5e-56 223.0 149 72.5
Manes.15G172200 Manihot esculenta HOM05D004380 ORTHO05D005134 2.0e-56 222.6 149 72.5
Sed0018208 Sechium edule HOM05D004380 ORTHO05D005134 2.0e-56 222.6 149 71.1
Actinidia31472 Actinidia chinensis HOM05D004380 ORTHO05D005134 2.6e-56 222.2 149 71.1
Dinv25182 Davidia involucrata HOM05D004380 ORTHO05D005134 2.6e-56 222.2 149 70.5
Lsat_1_v5_gn_6_63641 Lactuca sativa HOM05D004380 ORTHO05D005134 3.4e-56 221.9 148 69.6
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 3.4e-56 221.9 148 72.3
ECA233G1538 Erigeron canadensis HOM05D004380 ORTHO05D005134 4.4e-56 221.5 149 71.8
CiPaw.11G087400 Carya illinoinensis HOM05D004380 ORTHO05D005134 5.8e-56 221.1 149 69.8
ClCG03G011240 Citrullus lanatus HOM05D004380 ORTHO05D005134 5.8e-56 221.1 149 70.5
RcHm_v2.0_Chr4g0446311 Rosa chinensis HOM05D004380 ORTHO05D005134 5.8e-56 221.1 149 70.5
Sp1g27590 Schrenkiella parvula HOM05D004380 ORTHO05D005134 5.8e-56 221.1 149 70.5
THA.LOC104814403 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 5.8e-56 221.1 149 69.8
Hund11501 Selenicereus undatus HOM05D004380 ORTHO05D005134 7.6e-56 220.7 149 71.8
CsaV3_2G035720 Cucumis sativus L. HOM05D004380 ORTHO05D005134 9.9e-56 220.3 149 70.5
Gohir.A11G262400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 9.9e-56 220.3 149 70.5
Gorai.007G293700 Gossypium raimondii HOM05D004380 ORTHO05D005134 1.7e-55 219.5 149 70.5
BcaB03g13784 Brassica carinata HOM05D004380 ORTHO05D005134 2.2e-55 219.2 149 69.8
Hma1.2p1_0311F.1_g121260 Hydrangea macrophylla HOM05D004380 ORTHO05D005134 2.9e-55 218.8 149 69.8
Nn6g33684 Nelumbo nucifera HOM05D004380 ORTHO05D005134 1.4e-54 216.5 149 67.8
BcaC05g27949 Brassica carinata HOM05D004380 ORTHO05D005134 2.4e-54 215.7 149 69.1
C05p39530 Brassica napus HOM05D004380 ORTHO05D005134 2.4e-54 215.7 149 69.1
Migut.J01084 Erythranthe guttata HOM05D004380 ORTHO05D005134 2.4e-54 215.7 149 67.1
FAN07G2732 Fragaria x ananassa HOM05D004380 ORTHO05D005134 2.4e-54 215.7 149 69.1
FAN17G2609 Fragaria x ananassa HOM05D004380 ORTHO05D005134 2.4e-54 215.7 149 68.5
Solyc03g033950.4 Solanum lycopersicum HOM05D004380 ORTHO05D005134 3.2e-54 215.3 149 69.1
MD16G1006500 Malus domestica HOM05D004380 ORTHO05D005134 5.4e-54 214.5 149 69.1
CAN.G1336.5 Capsicum annuum HOM05D004380 ORTHO05D005134 7.1e-54 214.2 149 67.8
HanXRQChr16g0500491 Helianthus annuus HOM05D004380 ORTHO05D005134 7.1e-54 214.2 149 68.5
Sopen03g006700 Solanum pennellii HOM05D004380 ORTHO05D005134 7.1e-54 214.2 146 69.9
Thecc.05G299600 Theobroma cacao HOM05D004380 ORTHO05D005134 7.1e-54 214.2 149 67.8
Carub.0001s3020 Capsella rubella HOM05D004380 ORTHO05D005134 9.2e-54 213.8 149 69.1
Thhalv10007193m.g Eutrema salsugineum HOM05D004380 ORTHO05D005134 9.2e-54 213.8 149 69.1
Ah.09g224390 Amaranthus hybridus HOM05D004380 ORTHO05D005134 1.6e-53 213.0 149 69.1
BolC5t32694H Brassica oleracea HOM05D004380 ORTHO05D005134 1.6e-53 213.0 149 68.5
CDE11G0710 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 1.6e-53 213.0 149 67.8
PGSC0003DMG400022576 Solanum tuberosum HOM05D004380 ORTHO05D005134 1.6e-53 213.0 146 69.2
Aa31LG9G15640 Aethionema arabicum HOM05D004380 ORTHO05D005134 2.1e-53 212.6 149 66.4
A05p25450 Brassica napus HOM05D004380 ORTHO05D005134 2.7e-53 212.2 149 67.8
BraA05t21429Z Brassica rapa HOM05D004380 ORTHO05D005134 2.7e-53 212.2 149 67.8
FAN22G0510 Fragaria x ananassa HOM05D004380 ORTHO05D005134 2.7e-53 212.2 149 66.4
EL10Ac4g09041 Beta vulgaris HOM05D004380 ORTHO05D005134 3.5e-53 211.8 149 69.1
QL03p017813 Quercus lobata HOM05D004380 ORTHO05D005134 3.5e-53 211.8 148 68.9
Cpa.g.sc69.34 Carica papaya HOM05D004380 ORTHO05D005134 1.3e-52 209.9 139 70.5
Aqoxy3G00393 Aquilegia oxysepala HOM05D004380 ORTHO05D005134 1.7e-52 209.5 149 65.8
Os08g0178300 Oryza sativa ssp. japonica HOM05D004380 ORTHO05D005134 1.7e-52 209.5 149 67.1
FvH4_4g36560 Fragaria vesca HOM05D004380 ORTHO05D005134 2.3e-52 209.1 149 67.1
FAN12G0331 Fragaria x ananassa HOM05D004380 ORTHO05D005134 2.3e-52 209.1 149 67.1
HanXRQChr12g0372541 Helianthus annuus HOM05D004380 ORTHO05D005134 6.6e-52 207.6 149 66.4
Sabra03G0056900 Salix brachista HOM05D004380 ORTHO05D005134 6.6e-52 207.6 142 69.0
AL1G45970 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 1.5e-51 206.5 149 67.1
CARHR031210 Cardamine hirsuta HOM05D004380 ORTHO05D005134 1.5e-51 206.5 149 65.8
Cpa.g.sc69.32 Carica papaya HOM05D004380 ORTHO05D005134 1.5e-51 206.5 149 66.4
Aa31LG9G6660 Aethionema arabicum HOM05D004380 ORTHO05D005134 3.3e-51 205.3 149 64.4
Prupe.8G202500 Prunus persica HOM05D004380 ORTHO05D005134 3.3e-51 205.3 149 65.8
Sed0024296 Sechium edule HOM05D004380 ORTHO05D005134 7.3e-51 204.1 147 67.3
COL.COLO4_13527 Corchorus olitorius HOM05D004380 ORTHO05D005134 9.6e-51 203.8 149 67.1
AT1G31870 Arabidopsis thaliana HOM05D004380 ORTHO05D005134 1.2e-50 203.4 149 66.4
Medtr8g030840 Medicago truncatula HOM05D004380 ORTHO05D005134 1.2e-50 203.4 149 64.4
CAN.G1823.5 Capsicum annuum HOM05D004380 ORTHO05D005134 2.1e-50 202.6 149 65.8
CDE02G1296 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 3.6e-50 201.8 149 65.1
Oeu045705.2 Olea europaea HOM05D004380 ORTHO05D005134 3.6e-50 201.8 147 64.6
arahy.Tifrunner.gnm1.ann1.522STQ Arachis hypogaea HOM05D004380 ORTHO05D005134 5.2e-49 198.0 149 63.8
PSO832G0693 Papaver somniferum HOM05D004380 ORTHO05D005134 6.9e-49 197.6 149 61.1
PSO782G4920 Papaver somniferum HOM05D004380 ORTHO05D005134 9.0e-49 197.2 149 61.1
TAR629G2821 Trochodendron aralioides HOM05D004380 ORTHO05D005134 1.5e-48 196.4 149 63.1
PSO063G6462 Papaver somniferum HOM05D004380 ORTHO05D005134 2.0e-48 196.1 149 60.4
Haze_08305 Corylus avellana HOM05D004380 ORTHO05D005134 2.6e-48 195.7 174 58.0
HPP92_020120 Vanilla planifolia HOM05D004380 ORTHO05D005134 3.4e-48 195.3 149 62.4
HPP92_020130 Vanilla planifolia HOM05D004380 ORTHO05D005134 3.4e-48 195.3 149 62.4
Peaxi162Scf01164g00006 Petunia axillaris HOM05D004380 ORTHO05D005134 9.9e-48 193.7 149 63.8
CARHR062710 Cardamine hirsuta HOM05D004380 ORTHO05D005134 1.3e-47 193.4 149 63.1
Gohir.D11G272400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 1.3e-47 193.4 149 63.8
Mapoly0062s0011 Marchantia polymorpha HOM05D004380 ORTHO05D005134 1.3e-47 193.4 150 62.0
Pp3c3_10050 Physcomitrium patens HOM05D004380 ORTHO05D005134 2.2e-47 192.6 146 64.4
ATR0665G406 Amborella trichopoda HOM05D004380 ORTHO05D005134 1.9e-46 189.5 149 61.7
AagrBONN_evm.TU.Sc2ySwM_117.3835 Anthoceros agrestis HOM05D004380 ORTHO05D005134 2.7e-45 185.7 146 59.6
Psat4g154840 Pisum sativum HOM05D004380 ORTHO05D005134 2.7e-45 185.7 149 59.7
Lj3g0000626 Lotus japonicus HOM05D004380 ORTHO05D005134 4.6e-45 184.9 148 59.5
VMungo0331G0855 Vigna mungo HOM05D004380 ORTHO05D005134 6.0e-45 184.5 149 60.4
CANSAT21G1629 Cannabis sativa HOM05D004380 ORTHO05D005134 7.8e-45 184.1 149 59.7
Glyma.07G070900 Glycine max HOM05D004380 ORTHO05D005134 1.0e-44 183.7 119 71.4
unitig_21.g20505 Utricularia gibba HOM05D004380 ORTHO05D005134 1.7e-44 183.0 148 60.8
Duzib128G0331 Durio zibethinus HOM05D004380 ORTHO05D005134 2.3e-44 182.6 147 60.5
CAN.G248.21 Capsicum annuum HOM05D004380 ORTHO05D005134 3.0e-44 182.2 149 57.7
CBR_g26347 Chara braunii HOM05D004380 ORTHO05D005134 1.1e-43 180.3 146 62.3
Ciclev10033653m.g Citrus clementina HOM05D004380 ORTHO05D005134 1.1e-43 180.3 145 57.9
TPR.G20578 Trifolium pratense HOM05D004380 ORTHO05D005134 1.1e-43 180.3 114 72.8
Lalb_Chr04g0258181 Lupinus albus HOM05D004380 ORTHO05D005134 1.9e-43 179.5 149 56.4
SMO144G0180 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 1.9e-43 179.5 148 58.8
Phvul.010G098800 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 2.5e-43 179.1 149 59.1
CiPaw.04G096200 Carya illinoinensis HOM05D004380 ORTHO05D005134 5.6e-43 177.9 146 60.3
Nitab4.5_0005084g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 5.6e-43 177.9 142 62.0
Phvul.011G076400 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 5.6e-43 177.9 149 59.1
arahy.Tifrunner.gnm1.ann1.MH0ZUI Arachis hypogaea HOM05D004380 ORTHO05D005134 2.8e-42 175.6 114 71.1
SEGI_39298 Sequoiadendron giganteum HOM05D004380 ORTHO05D005134 7.6e-40 167.5 116 69.0
AUR62007222 Chenopodium quinoa HOM05D004380 ORTHO05D005134 1.3e-39 166.8 148 56.1
arahy.Tifrunner.gnm1.ann1.ARJY2C Arachis hypogaea HOM05D004380 ORTHO05D005134 1.4e-38 163.3 147 58.5
arahy.Tifrunner.gnm1.ann1.I1PL9V Arachis hypogaea HOM05D004380 ORTHO05D005134 1.6e-37 159.8 119 63.9
SMO118G0163 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 1.3e-36 156.8 149 54.4
AUR62018778 Chenopodium quinoa HOM05D004380 ORTHO05D005134 6.7e-36 154.5 117 63.2
THA.LOC104812727 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 6.2e-34 147.9 119 58.8
Nitab4.5_0008421g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 3.8e-31 138.7 152 49.3
CSS0001415 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 1.1e-30 137.1 87 73.6
CSS0037993 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 1.1e-30 137.1 87 73.6
arahy.Tifrunner.gnm1.ann1.45D7QY Arachis hypogaea HOM05D004380 ORTHO05D005134 2.4e-30 136.0 124 57.3
Cre01.g003487 Chlamydomonas reinhardtii HOM05D004380 ORTHO05D005134 7.1e-30 134.4 154 46.1
arahy.Tifrunner.gnm1.ann1.MX4EXC Arachis hypogaea HOM05D004380 ORTHO05D005134 4.6e-29 131.7 149 49.0
MCO15G532 Micromonas commoda HOM05D004380 ORTHO05D005134 4.0e-25 118.6 142 42.3
PRCOL_00005638 Prasinoderma coloniale HOM05D004380 ORTHO05D005134 2.5e-22 109.4 153 42.5
Sp5g21510 Schrenkiella parvula HOM05D004380 ORTHO05D005134 9.3e-22 107.5 96 54.2
Potri.001G147100 Populus trichocarpa HOM05D004380 ORTHO05D005134 1.6e-18 96.7 103 48.5
Haze_08308 Corylus avellana HOM05D004380 ORTHO05D005134 9.0e-17 90.9 114 48.2
Dinv40656 Davidia involucrata HOM05D000301 ORTHO05D000303 9.0e-17 90.9 53 69.8
AL3G52660 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 9.3e-14 80.9 91 50.5
Cfa026589 Carpinus fangiana HOM05D004380 ORTHO05D005134 1.0e-12 77.4 138 36.2
MELO3C024775.2 Cucumis melo HOM05D004380 ORTHO05D005134 1.4e-12 77.0 59 64.4
C05p31200 Brassica napus HOM05D004380 ORTHO05D005134 5.3e-09 65.1 49 63.3
COL.COLO4_33038 Corchorus olitorius HOM05D004380 ORTHO05D005134 6.9e-09 64.7 60 55.0


User provided reference genes

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