Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006889 Daucus carota HOM05D004437 ORTHO05D005401 1.0e-73 280.0 146 100.0
Nitab4.5_0001702g0190 Nicotiana tabacum HOM05D004437 ORTHO05D005401 1.2e-45 186.8 144 69.4
Nitab4.5_0001127g0160 Nicotiana tabacum HOM05D004437 ORTHO05D005401 2.0e-45 186.0 140 67.9
Dinv32406 Davidia involucrata HOM05D004437 ORTHO05D005401 1.4e-43 179.9 156 64.7
Lsat_1_v5_gn_7_6120 Lactuca sativa HOM05D004437 ORTHO05D005401 1.4e-43 179.9 156 63.5
Nitab4.5_0007346g0070 Nicotiana tabacum HOM05D004437 ORTHO05D005401 5.5e-43 177.9 155 64.5
ClCG00G000160 Citrullus lanatus HOM05D004437 ORTHO05D005401 7.1e-43 177.6 113 77.9
ClCG10G003410 Citrullus lanatus HOM05D004437 ORTHO05D005401 7.1e-43 177.6 113 77.9
Actinidia09575 Actinidia chinensis HOM05D004437 ORTHO05D005401 9.3e-43 177.2 158 65.2
HanXRQChr06g0169271 Helianthus annuus HOM05D004437 ORTHO05D005401 1.2e-42 176.8 160 63.1
MSTRG.25195 Avicennia marina HOM05D004437 ORTHO05D005401 3.5e-42 175.3 123 72.4
Hma1.2p1_0033F.1_g020790 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 4.6e-42 174.9 157 63.1
Dinv43738 Davidia involucrata HOM05D004437 ORTHO05D005401 7.9e-42 174.1 156 62.8
ECA236G3516 Erigeron canadensis HOM05D004437 ORTHO05D005401 1.0e-41 173.7 123 72.4
Migut.C00761 Erythranthe guttata HOM05D004437 ORTHO05D005401 1.0e-41 173.7 153 64.7
CSS0004475 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 1.3e-41 173.3 107 79.4
CSS0011172 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 2.3e-41 172.6 107 78.5
HanXRQChr04g0122121 Helianthus annuus HOM05D004437 ORTHO05D005401 2.3e-41 172.6 156 62.8
Lsat_1_v5_gn_7_59201 Lactuca sativa HOM05D004437 ORTHO05D005401 2.3e-41 172.6 164 61.0
COL.COLO4_12656 Corchorus olitorius HOM05D004437 ORTHO05D005401 6.7e-41 171.0 144 66.7
Duzib138G0705 Durio zibethinus HOM05D004437 ORTHO05D005401 8.7e-41 170.6 139 66.9
Cc02_g36970 Coffea canephora HOM05D004437 ORTHO05D005401 1.1e-40 170.2 122 70.5
Hma1.2p1_2548F.1_g324200 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 1.1e-40 170.2 156 61.5
Peaxi162Scf00988g00110 Petunia axillaris HOM05D004437 ORTHO05D005401 1.5e-40 169.9 155 60.6
CsaV3_3G003440 Cucumis sativus L. HOM05D004437 ORTHO05D005401 1.9e-40 169.5 124 71.8
Eucgr.E01334 Eucalyptus grandis HOM05D004437 ORTHO05D005401 1.9e-40 169.5 124 71.8
Solyc05g047690.3 Solanum lycopersicum HOM05D004437 ORTHO05D005401 1.9e-40 169.5 155 62.6
Sopen05g027940 Solanum pennellii HOM05D004437 ORTHO05D005401 1.9e-40 169.5 155 62.6
MELO3C014010.2 Cucumis melo HOM05D004437 ORTHO05D005401 2.5e-40 169.1 124 71.0
PGSC0003DMG400013695 Solanum tuberosum HOM05D004437 ORTHO05D005401 2.5e-40 169.1 155 62.6
Aqoxy5G03951 Aquilegia oxysepala HOM05D004437 ORTHO05D005401 4.3e-40 168.3 123 71.5
Gohir.D11G087600 Gossypium hirsutum HOM05D004437 ORTHO05D005401 4.3e-40 168.3 153 62.7
MSTRG.1255 Avicennia marina HOM05D004437 ORTHO05D005401 5.7e-40 167.9 123 69.9
Gohir.A11G083500 Gossypium hirsutum HOM05D004437 ORTHO05D005401 5.7e-40 167.9 153 62.7
Gorai.007G093600 Gossypium raimondii HOM05D004437 ORTHO05D005401 5.7e-40 167.9 153 62.7
Nitab4.5_0004622g0030 Nicotiana tabacum HOM05D004437 ORTHO05D005401 5.7e-40 167.9 103 78.6
PGR042G1009 Punica granatum HOM05D004437 ORTHO05D005401 9.7e-40 167.2 154 66.9
Thecc.01G371500 Theobroma cacao HOM05D004437 ORTHO05D005401 9.7e-40 167.2 139 67.6
TAR374G0190 Trochodendron aralioides HOM05D004437 ORTHO05D005401 1.3e-39 166.8 156 61.5
CAN.G1608.2 Capsicum annuum HOM05D004437 ORTHO05D005401 1.6e-39 166.4 155 61.9
Duzib133G0135 Durio zibethinus HOM05D004437 ORTHO05D005401 1.6e-39 166.4 139 66.2
CDE06G2826 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 2.2e-39 166.0 124 71.8
Atru.chr5.365 Acer truncatum HOM05D004437 ORTHO05D005401 2.8e-39 165.6 123 71.5
ATR0661G478 Amborella trichopoda HOM05D004437 ORTHO05D005401 4.8e-39 164.9 124 70.2
C04p06550 Brassica napus HOM05D004437 ORTHO05D005401 6.3e-39 164.5 146 60.3
BolC4t22280H Brassica oleracea HOM05D004437 ORTHO05D005401 6.3e-39 164.5 146 60.3
CANSAT21G0327 Cannabis sativa HOM05D004437 ORTHO05D005401 6.3e-39 164.5 124 70.2
Sc22g0000410 Simmondsia chinensis HOM05D004437 ORTHO05D005401 6.3e-39 164.5 124 69.4
A05p05600 Brassica napus HOM05D004437 ORTHO05D005401 8.2e-39 164.1 122 68.0
BraA05t19533Z Brassica rapa HOM05D004437 ORTHO05D005401 8.2e-39 164.1 122 68.0
Ah.12g057860 Amaranthus hybridus HOM05D004437 ORTHO05D005401 1.1e-38 163.7 111 72.1
Sp4g27680 Schrenkiella parvula HOM05D004437 ORTHO05D005401 1.1e-38 163.7 143 62.2
Sed0010224 Sechium edule HOM05D004437 ORTHO05D005401 1.1e-38 163.7 124 68.5
THA.LOC104802003 Tarenaya hassleriana HOM05D004437 ORTHO05D005401 1.1e-38 163.7 122 68.0
Ciclev10022649m.g Citrus clementina HOM05D004437 ORTHO05D005401 1.4e-38 163.3 155 61.9
SGA_v2.0_scaffold201G41379 Striga asiatica HOM05D000186 ORTHO05D001124 1.4e-38 163.3 114 71.1
CARHR140860 Cardamine hirsuta HOM05D004437 ORTHO05D005401 1.8e-38 162.9 145 60.7
CiPaw.12G100900 Carya illinoinensis HOM05D004437 ORTHO05D005401 1.8e-38 162.9 124 68.5
BcaB02g09022 Brassica carinata HOM05D004437 ORTHO05D005401 2.4e-38 162.5 145 59.3
Atru.chr9.1501 Acer truncatum HOM05D004437 ORTHO05D005401 3.1e-38 162.2 124 69.4
Thhalv10001671m.g Eutrema salsugineum HOM05D004437 ORTHO05D005401 3.1e-38 162.2 154 61.0
SalBow7G1560 Salvia bowleyana HOM05D004437 ORTHO05D005401 3.1e-38 162.2 163 59.5
Nn1g01279 Nelumbo nucifera HOM05D004437 ORTHO05D005401 4.1e-38 161.8 139 64.0
Carub.0004s2829 Capsella rubella HOM05D004437 ORTHO05D005401 5.3e-38 161.4 145 60.0
MD04G1070900 Malus domestica HOM05D004437 ORTHO05D005401 5.3e-38 161.4 124 68.5
AL4G44810 Arabidopsis lyrata HOM05D004437 ORTHO05D005401 6.9e-38 161.0 150 60.7
MBI04_g06621_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 6.9e-38 161.0 108 75.9
MBI04_g34692_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 9.0e-38 160.6 106 77.4
PSO478G3285 Papaver somniferum HOM05D004437 ORTHO05D005401 9.0e-38 160.6 109 76.1
TWI23G1180 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 9.0e-38 160.6 156 62.2
COL.COLO4_23799 Corchorus olitorius HOM05D004437 ORTHO05D005401 1.2e-37 160.2 124 65.3
PSO782G1895 Papaver somniferum HOM05D004437 ORTHO05D005401 1.5e-37 159.8 109 76.1
BcaC01g05120 Brassica carinata HOM05D004437 ORTHO05D005401 2.6e-37 159.1 103 74.8
BcaC02g12196 Brassica carinata HOM05D004437 ORTHO05D005401 2.6e-37 159.1 103 74.8
Cfa012070 Carpinus fangiana HOM05D004437 ORTHO05D005401 2.6e-37 159.1 107 75.7
Haze_08988 Corylus avellana HOM05D004437 ORTHO05D005401 2.6e-37 159.1 107 75.7
Prupe.5G087000 Prunus persica HOM05D004437 ORTHO05D005401 2.6e-37 159.1 162 59.3
SEGI_23012 Sequoiadendron giganteum HOM05D004437 ORTHO05D005401 2.6e-37 159.1 106 72.6
TAR629G1686 Trochodendron aralioides HOM05D004437 ORTHO05D005401 2.6e-37 159.1 107 76.6
unitig_578.g16077 Utricularia gibba HOM05D002183 ORTHO05D002169 2.6e-37 159.1 113 71.7
GSVIVG01027575001 Vitis vinifera HOM05D004437 ORTHO05D005401 2.6e-37 159.1 156 62.2
vmacro13357 Vaccinium macrocarpon HOM05D004437 ORTHO05D005401 3.4e-37 158.7 138 60.9
Potri.003G119300 Populus trichocarpa HOM05D004437 ORTHO05D005401 4.5e-37 158.3 124 69.4
MELO3C006160.2 Cucumis melo HOM05D004437 ORTHO05D005401 5.9e-37 157.9 124 68.5
Hund14703 Selenicereus undatus HOM05D004437 ORTHO05D005401 7.7e-37 157.5 105 73.3
Zm00001eb230470 Zea mays HOM05D004437 ORTHO05D005401 7.7e-37 157.5 116 71.6
SGA_v2.0_scaffold11G05840 Striga asiatica HOM05D000186 ORTHO05D001124 1.0e-36 157.1 113 69.9
VMungo0331G2039 Vigna mungo HOM05D004437 ORTHO05D005401 1.0e-36 157.1 124 69.4
Pp3c14_24540 Physcomitrium patens HOM05D004437 ORTHO05D005401 1.3e-36 156.8 142 60.6
Phvul.010G087700 Phaseolus vulgaris HOM05D004437 ORTHO05D005401 2.2e-36 156.0 124 68.5
Potri.002G151500 Populus trichocarpa HOM05D004437 ORTHO05D005401 2.2e-36 156.0 107 75.7
TWI14G0837 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 3.8e-36 155.2 158 61.4
Glyma.03G019600 Glycine max HOM05D004437 ORTHO05D005401 5.0e-36 154.8 124 68.5
Manes.01G263900 Manihot esculenta HOM05D004437 ORTHO05D005401 5.0e-36 154.8 156 60.3
Manes.05G042100 Manihot esculenta HOM05D004437 ORTHO05D005401 6.5e-36 154.5 154 59.7
AT2G45640 Arabidopsis thaliana HOM05D004437 ORTHO05D005401 8.5e-36 154.1 146 57.5
Medtr8g033340 Medicago truncatula HOM05D004437 ORTHO05D005401 8.5e-36 154.1 124 68.5
RcHm_v2.0_Chr7g0199901 Rosa chinensis HOM05D004437 ORTHO05D005401 8.5e-36 154.1 125 64.8
FAN04G1903 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.4e-35 153.3 157 56.1
AUR62010560 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.9e-35 152.9 105 72.4
Psat4g150640 Pisum sativum HOM05D004437 ORTHO05D005401 1.9e-35 152.9 124 66.9
RcHm_v2.0_Chr1g0351651 Rosa chinensis HOM05D004437 ORTHO05D005401 1.9e-35 152.9 123 66.7
CsaV3_3G009410 Cucumis sativus L. HOM05D004437 ORTHO05D005401 2.5e-35 152.5 157 58.6
MD00G1131900 Malus domestica HOM05D004437 ORTHO05D005401 3.2e-35 152.1 107 71.0
QL08p051220 Quercus lobata HOM05D004437 ORTHO05D005401 4.2e-35 151.8 155 60.0
Lj3g0004540 Lotus japonicus HOM05D004437 ORTHO05D005401 5.5e-35 151.4 153 58.2
Sabra03G0083300 Salix brachista HOM05D004437 ORTHO05D005401 5.5e-35 151.4 106 73.6
Lalb_Chr10g0097651 Lupinus albus HOM05D004437 ORTHO05D005401 7.2e-35 151.0 143 62.2
Ca_23785_v3 Cicer arietinum L. HOM05D004437 ORTHO05D005401 1.2e-34 150.2 151 61.6
Zm00001eb208420 Zea mays HOM05D004437 ORTHO05D005401 1.2e-34 150.2 127 66.1
CiPaw.01G258300 Carya illinoinensis HOM05D004437 ORTHO05D005401 2.7e-34 149.1 154 59.1
FAN13G0465 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.7e-34 149.1 174 55.7
Lj9A574G30 Lonicera japonica HOM05D000186 ORTHO05D001124 2.7e-34 149.1 107 72.9
MD02G1197700 Malus domestica HOM05D004437 ORTHO05D005401 2.7e-34 149.1 123 65.9
Os02g0122000 Oryza sativa ssp. japonica HOM05D004437 ORTHO05D005401 2.7e-34 149.1 122 67.2
FAN08G0331 Fragaria x ananassa HOM05D004437 ORTHO05D005401 3.6e-34 148.7 169 53.8
Prupe.2G150900 Prunus persica HOM05D004437 ORTHO05D005401 3.6e-34 148.7 123 65.9
FvH4_5g01190 Fragaria vesca HOM05D004437 ORTHO05D005401 1.4e-33 146.7 168 55.4
Hund16975 Selenicereus undatus HOM05D004437 ORTHO05D005401 1.8e-33 146.4 107 70.1
FvH4_7g12660 Fragaria vesca HOM05D004437 ORTHO05D005401 8.8e-33 144.1 123 61.8
FAN10G0783 Fragaria x ananassa HOM05D004437 ORTHO05D005401 8.8e-33 144.1 123 61.8
FAN10G4017 Fragaria x ananassa HOM05D004437 ORTHO05D005401 8.8e-33 144.1 123 61.8
CBR_g4404 Chara braunii HOM05D004437 ORTHO05D005401 1.1e-32 143.7 105 68.6
FAN18G0922 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.1e-32 143.7 106 69.8
Potri.014G074000 Populus trichocarpa HOM05D004437 ORTHO05D005401 1.9e-32 142.9 123 64.2
SMO230G0007 Selaginella moellendorffii HOM05D004437 ORTHO05D005401 2.5e-32 142.5 140 58.6
Mapoly0086s0082 Marchantia polymorpha HOM05D004437 ORTHO05D005401 4.3e-32 141.7 148 54.1
AagrBONN_evm.TU.Sc2ySwM_228.779 Anthoceros agrestis HOM05D004437 ORTHO05D005401 5.7e-32 141.4 137 58.4
AUR62017329 Chenopodium quinoa HOM05D004437 ORTHO05D005401 7.4e-32 141.0 137 57.7
arahy.Tifrunner.gnm1.ann1.9F5S9Q Arachis hypogaea HOM05D004437 ORTHO05D005401 9.7e-32 140.6 124 62.9
arahy.Tifrunner.gnm1.ann1.7T3GCC Arachis hypogaea HOM05D004437 ORTHO05D005401 2.8e-31 139.0 124 62.1
ClCG05G001990 Citrullus lanatus HOM05D004437 ORTHO05D005401 8.2e-31 137.5 173 52.0
AUR62004271 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.2e-29 133.7 107 66.4
AagrBONN_evm.TU.Sc2ySwM_362.2206 Anthoceros agrestis HOM05D004437 ORTHO05D005401 6.5e-28 127.9 136 55.1
HPP92_025880 Vanilla planifolia HOM05D004437 ORTHO05D005401 1.1e-27 127.1 107 63.6
EL10Ac1g00948 Beta vulgaris HOM05D004437 ORTHO05D005401 1.2e-26 123.6 89 67.4
Cpa.g.sc18.165 Carica papaya HOM05D004437 ORTHO05D005401 1.2e-26 123.6 117 59.0
AUR62033386 Chenopodium quinoa HOM05D004437 ORTHO05D005401 3.6e-26 122.1 187 46.0
EL10Ac5g12685 Beta vulgaris HOM05D004437 ORTHO05D005401 2.0e-24 116.3 138 50.0
Sed0003115 Sechium edule HOM05D004437 ORTHO05D005401 3.3e-24 115.5 110 59.1
Aa31LG1G27110 Aethionema arabicum HOM05D004437 ORTHO05D005401 4.4e-24 115.2 132 53.8
Cre09.g404400 Chlamydomonas reinhardtii HOM05D004437 ORTHO05D005401 4.1e-22 108.6 106 54.7
Sabra01G0086400 Salix brachista HOM05D004437 ORTHO05D005401 7.0e-22 107.8 155 51.0
CDE04G2772 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 1.5e-21 106.7 77 75.3
Oeu058600.1 Olea europaea HOM05D004437 ORTHO05D005401 3.4e-21 105.5 74 73.0
TPR.G14692 Trifolium pratense HOM05D004437 ORTHO05D005401 7.7e-21 104.4 117 55.6
SHI32178 Sapria himalayana HOM05D004437 ORTHO05D005401 2.2e-20 102.8 132 48.5
DCAR_008576 Daucus carota HOM05D004437 ORTHO05D005401 8.5e-20 100.9 134 49.3
FAN01G2781 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.1e-19 100.5 123 48.8
FAN06G0648 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.1e-19 100.5 123 48.8
FAN06G3102 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.1e-19 100.5 123 48.8
Glyma.07G081500 Glycine max HOM05D004437 ORTHO05D005401 1.1e-19 100.5 57 82.5
C03p30120 Brassica napus HOM05D004437 ORTHO05D005401 2.1e-18 96.3 76 64.5
BraA03t11727Z Brassica rapa HOM05D004437 ORTHO05D005401 6.1e-18 94.7 76 63.2
BolC3t15361H Brassica oleracea HOM05D004437 ORTHO05D005401 1.8e-17 93.2 76 63.2
Glyma.20G186451 Glycine max HOM05D004437 ORTHO05D005401 8.8e-17 90.9 60 76.7
Zm00001eb230390 Zea mays HOM05D004437 ORTHO05D004372 1.6e-13 80.1 58 70.7
Actinidia31448 Actinidia chinensis HOM05D004437 ORTHO05D005401 2.6e-13 79.3 115 53.9
A03p25260 Brassica napus HOM05D004437 ORTHO05D005401 4.5e-13 78.6 47 76.6
CAN.G126.10 Capsicum annuum HOM05D004437 ORTHO05D005401 2.9e-12 75.9 97 52.6
Haze_26096 Corylus avellana HOM05D004437 ORTHO05D005401 6.5e-12 74.7 102 40.2
Haze_16715 Corylus avellana HOM05D004437 ORTHO05D005401 8.0e-10 67.8 83 51.8
BcaC09g48983 Brassica carinata HOM05D004437 ORTHO05D005401 2.0e-08 63.2 42 66.7
Atru.ctg1434.8 Acer truncatum HOM05D004437 ORTHO05D037942 7.0e-06 54.7 113 32.7


User provided reference genes

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