Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 1.8e-173 612.5 306 100.0
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 6.5e-139 497.7 298 82.2
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 8.3e-134 480.7 299 78.6
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 1.9e-130 469.5 296 77.7
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 7.2e-130 467.6 307 73.3
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 9.5e-130 467.2 299 75.6
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.2e-129 466.8 303 75.9
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.3e-126 456.8 314 72.6
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 1.7e-126 456.4 319 73.4
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 6.3e-126 454.5 306 72.2
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 4.1e-125 451.8 303 69.6
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 7.0e-125 451.1 303 71.9
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.6e-124 449.9 303 71.9
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 1.0e-123 447.2 303 71.3
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 1.3e-123 446.8 305 68.9
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 2.3e-123 446.0 309 69.6
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.9e-123 445.7 305 68.9
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 2.9e-123 445.7 310 71.3
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 3.8e-123 445.3 304 71.4
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 1.1e-122 443.7 307 70.7
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.1e-122 443.7 316 70.9
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 2.5e-122 442.6 302 73.2
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 1.2e-121 440.3 300 70.7
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 1.0e-120 437.2 302 71.9
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.0e-120 437.2 314 69.4
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.4e-120 436.8 294 69.0
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 1.4e-120 436.8 301 67.8
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 1.8e-120 436.4 303 68.3
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.3e-120 436.0 304 68.4
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 3.1e-120 435.6 303 67.3
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 5.2e-120 434.9 295 68.5
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 1.2e-119 433.7 312 69.2
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 2.0e-119 433.0 297 69.7
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 2.0e-119 433.0 307 69.7
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 4.4e-119 431.8 307 69.4
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 4.4e-119 431.8 301 66.8
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 5.8e-119 431.4 301 67.1
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 7.5e-119 431.0 292 72.9
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 3.7e-118 428.7 302 67.9
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 6.4e-118 427.9 310 68.7
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 6.4e-118 427.9 296 68.9
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 8.3e-118 427.6 295 69.5
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 1.1e-117 427.2 299 69.6
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 1.4e-117 426.8 306 65.7
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 1.4e-117 426.8 293 68.3
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 1.9e-117 426.4 301 68.8
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.9e-117 426.4 303 69.0
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 3.2e-117 425.6 310 68.4
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 4.1e-117 425.2 303 68.3
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 4.6e-116 421.8 315 67.6
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 4.6e-116 421.8 304 67.8
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 4.6e-116 421.8 295 68.8
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 4.6e-116 421.8 293 70.0
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 1.7e-115 419.9 310 67.4
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 2.3e-115 419.5 298 68.8
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 2.3e-115 419.5 310 66.8
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 2.3e-115 419.5 300 69.0
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 3.0e-115 419.1 295 67.5
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 3.9e-115 418.7 289 69.2
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 5.0e-115 418.3 293 66.6
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 6.6e-115 417.9 296 68.9
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 4.3e-114 415.2 293 68.3
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.6e-113 413.3 309 66.3
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.8e-113 412.5 309 65.7
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 3.6e-113 412.1 311 65.3
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 6.2e-113 411.4 292 66.8
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.8e-112 409.8 301 65.8
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 4.0e-112 408.7 298 66.4
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.2e-111 407.1 294 68.7
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.5e-111 406.8 310 63.5
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 9.8e-111 404.1 302 65.9
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 2.9e-110 402.5 302 65.6
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 3.7e-110 402.1 304 65.5
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 3.7e-110 402.1 293 66.6
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 1.1e-109 400.6 306 66.3
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 1.9e-109 399.8 294 63.6
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 7.0e-109 397.9 298 65.4
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 1.6e-108 396.7 297 66.7
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 9.5e-106 387.5 309 64.7
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 1.6e-100 370.2 302 60.6
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 6.0e-100 368.2 298 61.4
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 1.1e-98 364.0 299 59.5
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 4.3e-98 362.1 237 74.7
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.2e-95 354.0 294 63.3
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 1.6e-92 343.6 257 64.6
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 2.7e-92 342.8 303 59.1
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 1.0e-91 340.9 231 72.7
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 1.8e-88 330.1 421 45.1
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 5.8e-87 325.1 240 66.2
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 1.7e-86 323.6 239 66.1
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.5e-84 315.8 301 55.1
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 1.5e-79 300.4 272 55.5
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 2.9e-78 296.2 255 59.6
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 3.9e-75 285.8 236 62.3
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 3.9e-75 285.8 190 70.5
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.5e-71 273.9 201 69.7
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.9e-69 266.9 304 49.0
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.0e-67 261.2 294 47.6
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 8.7e-67 258.1 199 63.8
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 2.2e-62 243.4 196 61.2
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 8.4e-62 241.5 139 82.7
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.9e-58 230.3 302 44.7
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 1.6e-57 227.3 188 64.4
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.2e-57 226.9 253 49.0
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 1.0e-54 218.0 142 71.8
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 1.1e-53 214.5 177 62.1
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 1.0e-51 208.0 142 68.3
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 2.3e-51 206.8 125 73.6
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 2.3e-51 206.8 125 73.6
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 1.1e-50 204.5 163 61.3
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.1e-48 198.0 171 61.4
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 1.4e-48 197.6 163 59.5
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.0e-43 179.9 103 73.8
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 3.0e-43 179.9 127 63.0
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.1e-40 169.9 166 54.8
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 9.4e-37 158.3 117 69.2
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.4e-35 154.5 128 58.6
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 1.6e-28 131.0 111 62.2
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.7e-26 122.5 100 64.0
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.8e-25 120.2 100 63.0
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.8e-25 120.2 100 63.0
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.7e-25 119.8 101 64.4
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 7.7e-23 112.1 95 64.2
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 7.7e-23 112.1 139 46.0
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.7e-20 103.6 85 64.7
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 3.7e-17 93.2 72 65.3
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 4.1e-16 89.7 174 35.1
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 8.0e-12 75.5 56 73.2
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.3e-11 73.9 54 68.5
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 3.5e-07 60.1 69 47.8
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 2.3e-06 57.4 67 47.8


User provided reference genes

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