Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006535 Daucus carota HOM05D003838 ORTHO05D004444 7.2e-110 400.6 202 100.0
Lj9P420T34 Lonicera japonica HOM05D003838 ORTHO05D004444 4.3e-70 268.5 194 68.0
Hma1.2p1_0002F.1_g002170 Hydrangea macrophylla HOM05D003838 ORTHO05D004444 3.4e-67 258.8 193 65.3
Prupe.3G140200 Prunus persica HOM05D003838 ORTHO05D004444 3.2e-65 252.3 194 63.9
Potri.017G030000 Populus trichocarpa HOM05D003838 ORTHO05D004444 4.1e-65 251.9 200 62.0
CSS0022226 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 5.4e-65 251.5 193 64.2
GSVIVG01022417001 Vitis vinifera HOM05D003838 ORTHO05D004444 2.0e-64 249.6 196 60.7
CSS0031035 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 3.5e-64 248.8 193 63.2
Cfa015168 Carpinus fangiana HOM05D003838 ORTHO05D004444 6.0e-64 248.1 199 60.3
MD13G1208600 Malus domestica HOM05D003838 ORTHO05D004444 1.0e-63 247.3 196 61.2
Sabra17G0019500 Salix brachista HOM05D003838 ORTHO05D004444 1.0e-63 247.3 200 61.5
Gorai.011G142700 Gossypium raimondii HOM05D003838 ORTHO05D004444 1.7e-63 246.5 192 60.4
CSS0030021 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 3.0e-63 245.7 193 63.2
MSTRG.23130 Avicennia marina HOM05D003838 ORTHO05D004444 1.5e-62 243.4 196 60.2
Actinidia26441 Actinidia chinensis HOM05D003838 ORTHO05D004444 3.3e-62 242.3 193 60.6
Gohir.A10G137200 Gossypium hirsutum HOM05D003838 ORTHO05D004444 4.3e-62 241.9 192 59.4
Haze_01511 Corylus avellana HOM05D003838 ORTHO05D004444 2.8e-61 239.2 187 62.0
Duzib212G0889 Durio zibethinus HOM05D003838 ORTHO05D004444 3.6e-61 238.8 192 58.9
Ciclev10022331m.g Citrus clementina HOM05D003838 ORTHO05D004444 6.2e-61 238.0 195 58.5
CSS0020761 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 1.1e-60 237.3 193 61.7
PSO063G7239 Papaver somniferum HOM05D003838 ORTHO05D004444 1.4e-60 236.9 193 60.6
RcHm_v2.0_Chr4g0393311 Rosa chinensis HOM05D003838 ORTHO05D004444 1.8e-60 236.5 202 57.9
QL03p038958 Quercus lobata HOM05D003838 ORTHO05D004444 3.1e-60 235.7 195 59.0
Prupe.1G032600 Prunus persica HOM05D003838 ORTHO05D004444 8.9e-60 234.2 195 59.5
CDE06G0074 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.2e-59 233.8 193 60.6
Nn1g08615 Nelumbo nucifera HOM05D003838 ORTHO05D004444 2.0e-59 233.0 196 58.7
FvH4_4g03700 Fragaria vesca HOM05D003838 ORTHO05D004444 2.6e-59 232.6 198 55.1
FAN17G3077 Fragaria x ananassa HOM05D003838 ORTHO05D004444 4.4e-59 231.9 198 55.6
Manes.03G131800 Manihot esculenta HOM05D003838 ORTHO05D004444 4.4e-59 231.9 195 57.4
PSO782G5029 Papaver somniferum HOM05D003838 ORTHO05D004444 4.4e-59 231.9 193 59.6
Thecc.04G179800 Theobroma cacao HOM05D003838 ORTHO05D004444 4.4e-59 231.9 194 56.2
CANSAT78G1384 Cannabis sativa HOM05D003838 ORTHO05D004444 1.3e-58 230.3 188 59.6
MBI16_g18329_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 1.3e-58 230.3 193 58.5
Cc06_g03220 Coffea canephora HOM05D003838 ORTHO05D004444 1.7e-58 229.9 191 61.8
Migut.I00010 Erythranthe guttata HOM05D003838 ORTHO05D004444 2.2e-58 229.6 193 58.5
CsaV3_6G002030 Cucumis sativus L. HOM05D003838 ORTHO05D004444 2.9e-58 229.2 197 56.3
Sed0023259 Sechium edule HOM05D003838 ORTHO05D004444 3.7e-58 228.8 195 56.4
Cc07_g02090 Coffea canephora HOM05D003838 ORTHO05D004444 4.9e-58 228.4 191 60.2
TAR629G1244 Trochodendron aralioides HOM05D003838 ORTHO05D004444 4.9e-58 228.4 196 56.1
TAR376G0719 Trochodendron aralioides HOM05D003838 ORTHO05D004444 8.3e-58 227.6 196 55.1
FAN12G0299 Fragaria x ananassa HOM05D000189 ORTHO05D000474 1.9e-57 226.5 186 57.0
Peaxi162Scf00201g00019 Petunia axillaris HOM05D003838 ORTHO05D004444 2.4e-57 226.1 200 57.0
AUR62028681 Chenopodium quinoa HOM05D003838 ORTHO05D004444 5.4e-57 224.9 198 55.6
SGA_v2.0_scaffold90G27933 Striga asiatica HOM05D003838 ORTHO05D004444 5.4e-57 224.9 199 53.8
Nitab4.5_0000515g0040 Nicotiana tabacum HOM05D003838 ORTHO05D004444 1.2e-56 223.8 200 57.5
SalBow7G4199 Salvia bowleyana HOM05D003838 ORTHO05D004444 1.2e-56 223.8 198 54.5
RcHm_v2.0_Chr4g0390961 Rosa chinensis HOM05D003838 ORTHO05D004444 2.7e-56 222.6 194 55.7
SGA_v2.0_scaffold25G10841 Striga asiatica HOM05D003838 ORTHO05D004444 2.7e-56 222.6 199 53.8
vmacro23050 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 3.5e-56 222.2 192 54.7
PSO210G5426 Papaver somniferum HOM05D003838 ORTHO05D004444 4.6e-56 221.9 192 58.9
AUR62008103 Chenopodium quinoa HOM05D003838 ORTHO05D004444 7.8e-56 221.1 195 54.9
Eucgr.A00080 Eucalyptus grandis HOM05D003838 ORTHO05D004444 1.3e-55 220.3 193 57.0
arahy.Tifrunner.gnm1.ann1.0B6HPH Arachis hypogaea HOM05D003838 ORTHO05D004444 2.3e-55 219.5 196 50.5
QL10p048766 Quercus lobata HOM05D003838 ORTHO05D004444 2.3e-55 219.5 199 56.8
SalBow5G3784 Salvia bowleyana HOM05D003838 ORTHO05D004444 2.3e-55 219.5 194 55.7
RcHm_v2.0_Chr4g0390901 Rosa chinensis HOM05D003838 ORTHO05D004444 3.0e-55 219.2 194 55.2
arahy.Tifrunner.gnm1.ann1.536K79 Arachis hypogaea HOM05D003838 ORTHO05D004444 3.9e-55 218.8 196 50.5
PGR083G1767 Punica granatum HOM05D003838 ORTHO05D004444 5.1e-55 218.4 199 54.8
Atru.chr3.1491 Acer truncatum HOM05D003838 ORTHO05D004444 6.6e-55 218.0 191 55.0
Rhsim05G0049100 Rhododendron simsii HOM05D003838 ORTHO05D004444 6.6e-55 218.0 190 53.7
Manes.15G070000 Manihot esculenta HOM05D003838 ORTHO05D004444 2.5e-54 216.1 195 54.9
vmacro01004 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 2.5e-54 216.1 186 54.8
Phvul.005G032200 Phaseolus vulgaris HOM05D003838 ORTHO05D004444 3.3e-54 215.7 198 51.0
Glyma.11G081600 Glycine max HOM05D003838 ORTHO05D004444 5.6e-54 214.9 197 51.8
Lj5P157T23 Lonicera japonica HOM05D003838 ORTHO05D004444 7.3e-54 214.5 145 70.3
Peaxi162Scf00970g00146 Petunia axillaris HOM05D003838 ORTHO05D004444 7.3e-54 214.5 191 57.6
Rhsim09G0030300 Rhododendron simsii HOM05D003838 ORTHO05D004444 7.3e-54 214.5 190 53.7
Aa31LG1G8370 Aethionema arabicum HOM05D003838 ORTHO05D004444 2.8e-53 212.6 194 51.5
MELO3C008320.2 Cucumis melo HOM05D003838 ORTHO05D004444 4.7e-53 211.8 242 46.7
ClCG08G004710 Citrullus lanatus HOM05D003838 ORTHO05D004444 6.2e-53 211.5 193 53.9
ECA246G3227 Erigeron canadensis HOM05D003838 ORTHO05D004444 6.2e-53 211.5 193 54.4
Solyc10g079580.2 Solanum lycopersicum HOM05D003838 ORTHO05D004444 8.1e-53 211.1 187 57.2
Ca_14316_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 1.1e-52 210.7 193 52.8
HanXRQChr01g0021151 Helianthus annuus HOM05D003838 ORTHO05D004444 1.1e-52 210.7 197 55.3
Lalb_Chr10g0091981 Lupinus albus HOM05D003838 ORTHO05D004444 1.1e-52 210.7 193 53.4
Sc20g0000750 Simmondsia chinensis HOM05D003838 ORTHO05D004444 1.1e-52 210.7 196 52.6
VMungo1080G0233 Vigna mungo HOM05D003838 ORTHO05D004444 1.1e-52 210.7 198 51.5
COL.COLO4_07664 Corchorus olitorius HOM05D003838 ORTHO05D004444 1.4e-52 210.3 193 53.4
HanXRQChr16g0516761 Helianthus annuus HOM05D003838 ORTHO05D004444 1.4e-52 210.3 195 54.9
PGSC0003DMG400029841 Solanum tuberosum HOM05D003838 ORTHO05D004444 1.4e-52 210.3 187 56.7
HanXRQChr16g0504861 Helianthus annuus HOM05D003838 ORTHO05D004444 1.8e-52 209.9 197 53.8
Oeu016385.1 Olea europaea HOM05D003838 ORTHO05D004444 2.3e-52 209.5 174 59.8
Sopen10g030220 Solanum pennellii HOM05D003838 ORTHO05D004444 2.3e-52 209.5 187 56.7
TWI38G0658 Tripterygium wilfordii HOM05D003838 ORTHO05D004444 2.3e-52 209.5 200 52.0
Aqoxy7G02681 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 3.1e-52 209.1 196 53.6
CARHR005500 Cardamine hirsuta HOM05D003838 ORTHO05D004444 4.0e-52 208.8 190 52.1
Medtr3g021420 Medicago truncatula HOM05D003838 ORTHO05D004444 4.0e-52 208.8 198 49.5
RhsimUnG0118200 Rhododendron simsii HOM05D003838 ORTHO05D004444 5.2e-52 208.4 193 50.3
EL10Ac5g10613 Beta vulgaris HOM05D003838 ORTHO05D004444 1.2e-51 207.2 197 52.8
HanXRQChr02g0057691 Helianthus annuus HOM05D003838 ORTHO05D004444 1.2e-51 207.2 197 53.3
HanXRQChr10g0305171 Helianthus annuus HOM05D003838 ORTHO05D004444 1.2e-51 207.2 197 53.8
HanXRQChr14g0439271 Helianthus annuus HOM05D003838 ORTHO05D004444 1.2e-51 207.2 197 53.8
Lj3g0022900 Lotus japonicus HOM05D003838 ORTHO05D004444 1.2e-51 207.2 196 51.5
Nn5g28129 Nelumbo nucifera HOM05D003838 ORTHO05D004444 1.2e-51 207.2 193 54.9
Medtr3g030930 Medicago truncatula HOM05D003838 ORTHO05D004444 1.5e-51 206.8 198 49.5
SEGI_03408 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 1.5e-51 206.8 187 55.6
Nitab4.5_0002162g0060 Nicotiana tabacum HOM05D003838 ORTHO05D004444 2.0e-51 206.5 191 53.4
Psat5g216120 Pisum sativum HOM05D003838 ORTHO05D004444 2.6e-51 206.1 198 50.0
MBI16_g18328_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 3.4e-51 205.7 193 52.8
Nitab4.5_0002208g0080 Nicotiana tabacum HOM05D003838 ORTHO05D004444 3.4e-51 205.7 191 53.4
Nitab4.5_0024579g0010 Nicotiana tabacum HOM05D003838 ORTHO05D004444 7.6e-51 204.5 200 53.5
PGSC0003DMG400002948 Solanum tuberosum HOM05D003838 ORTHO05D004444 9.9e-51 204.1 188 55.3
Medtr7g090650 Medicago truncatula HOM05D003838 ORTHO05D004444 1.3e-50 203.8 200 49.0
Hund09632 Selenicereus undatus HOM05D003838 ORTHO05D004444 1.7e-50 203.4 195 53.8
HanXRQChr16g0517051 Helianthus annuus HOM05D003838 ORTHO05D004444 2.9e-50 202.6 198 53.5
Carub.0001s0533 Capsella rubella HOM05D003838 ORTHO05D004444 3.7e-50 202.2 190 49.5
RcHm_v2.0_Chr4g0390871 Rosa chinensis HOM05D003838 ORTHO05D004444 3.7e-50 202.2 187 53.5
CDE02G1933 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 4.9e-50 201.8 192 51.0
Ah.11g050950 Amaranthus hybridus HOM05D003838 ORTHO05D004444 8.3e-50 201.1 196 50.0
AL1G15920 Arabidopsis lyrata HOM05D003838 ORTHO05D004444 8.3e-50 201.1 190 50.0
Hund02940 Selenicereus undatus HOM05D003838 ORTHO05D004444 8.3e-50 201.1 196 52.6
HanXRQChr02g0057701 Helianthus annuus HOM05D003838 ORTHO05D004444 1.9e-49 199.9 196 54.1
TPR.G3853 Trifolium pratense HOM05D003838 ORTHO05D004444 1.9e-49 199.9 198 48.5
AT1G05970 Arabidopsis thaliana HOM05D003838 ORTHO05D004444 3.2e-49 199.1 190 47.9
Migut.L01638 Erythranthe guttata HOM05D003838 ORTHO05D004444 4.1e-49 198.7 192 53.1
HanXRQChr12g0355781 Helianthus annuus HOM05D003838 ORTHO05D004444 5.4e-49 198.4 197 53.8
Lalb_Chr17g0336351 Lupinus albus HOM05D003838 ORTHO05D004444 5.4e-49 198.4 193 49.2
arahy.Tifrunner.gnm1.ann1.JCJT2N Arachis hypogaea HOM05D000735 ORTHO05D004669 7.1e-49 198.0 191 47.6
C05p04300 Brassica napus HOM05D003838 ORTHO05D004444 1.2e-48 197.2 196 46.4
A10p04640 Brassica napus HOM05D003838 ORTHO05D004444 1.6e-48 196.8 193 47.2
THA.LOC104826203 Tarenaya hassleriana HOM05D003838 ORTHO05D004444 1.6e-48 196.8 194 52.6
BolC5t29205H Brassica oleracea HOM05D003838 ORTHO05D004444 2.1e-48 196.4 196 45.9
BraA10t42729Z Brassica rapa HOM05D003838 ORTHO05D004444 2.7e-48 196.1 193 46.6
AUR62011801 Chenopodium quinoa HOM05D003838 ORTHO05D004444 4.6e-48 195.3 198 51.0
Sp1g04800 Schrenkiella parvula HOM05D003838 ORTHO05D004444 6.0e-48 194.9 197 45.2
Thhalv10008811m.g Eutrema salsugineum HOM05D003838 ORTHO05D004444 2.3e-47 193.0 190 46.8
AUR62024648 Chenopodium quinoa HOM05D004658 ORTHO05D005927 8.6e-47 191.0 197 49.2
ECA238G0498 Erigeron canadensis HOM05D003838 ORTHO05D004444 1.9e-46 189.9 172 55.8
Aqoxy7G02974 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 2.5e-46 189.5 195 49.2
Lsat_1_v5_gn_2_85780 Lactuca sativa HOM05D003838 ORTHO05D004444 4.3e-46 188.7 173 55.5
SEGI_13821 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 4.3e-46 188.7 200 47.5
ATR0665G504 Amborella trichopoda HOM05D003838 ORTHO05D004444 7.3e-46 188.0 204 49.5
FAN12G3313 Fragaria x ananassa HOM05D003838 ORTHO05D004444 1.2e-45 187.2 195 48.2
FvH4_4g02890 Fragaria vesca HOM05D003838 ORTHO05D004444 3.6e-45 185.7 195 48.2
Gohir.D10G129400 Gossypium hirsutum HOM05D003838 ORTHO05D004444 6.2e-45 184.9 167 55.7
CARHR038440 Cardamine hirsuta HOM05D003838 ORTHO05D004444 1.4e-44 183.7 166 52.4
CiPaw.01G100400 Carya illinoinensis HOM05D003838 ORTHO05D004444 2.4e-44 183.0 147 58.5
Aqoxy285s002 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.5e-43 180.3 175 52.6
Sopen04g016270 Solanum pennellii HOM05D003838 ORTHO05D004444 2.6e-43 179.5 161 57.8
unitig_750.g28470 Utricularia gibba HOM05D003838 ORTHO05D004444 3.4e-43 179.1 190 47.9
Zm00001eb304590 Zea mays HOM05D003838 ORTHO05D004444 1.6e-40 170.2 198 42.9
BcaC05g24315 Brassica carinata HOM05D003838 ORTHO05D004444 3.5e-40 169.1 196 41.8
arahy.Tifrunner.gnm1.ann1.IZ4F9K Arachis hypogaea HOM05D003838 ORTHO05D004444 6.0e-40 168.3 196 42.9
EL10As5g23534 Beta vulgaris HOM05D003838 ORTHO05D004444 7.8e-40 167.9 192 47.4
Os04g0689700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 2.3e-39 166.4 199 41.7
CDE08G0678 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 5.1e-39 165.2 127 63.0
Os09g0111800 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 3.3e-38 162.5 197 42.1
Os07g0256200 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 4.3e-38 162.2 191 39.8
Sp1g04950 Schrenkiella parvula HOM05D003838 ORTHO05D004444 9.6e-38 161.0 197 40.6
Ca_25969_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 8.1e-37 157.9 165 47.3
vmacro04174 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 5.3e-36 155.2 158 51.9
FAN22G1473 Fragaria x ananassa HOM05D003838 ORTHO05D004444 1.2e-35 154.1 130 56.2
PSO832G2359 Papaver somniferum HOM05D003838 ORTHO05D004444 1.5e-35 153.7 192 45.3
Zm00001eb076930 Zea mays HOM05D003838 ORTHO05D004444 1.5e-35 153.7 202 40.1
ATR0665G008 Amborella trichopoda HOM05D003838 ORTHO05D004444 2.0e-35 153.3 150 46.7
Zm00001eb076310 Zea mays HOM05D003838 ORTHO05D004444 4.4e-35 152.1 202 40.1
Ca_24199_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 5.8e-35 151.8 164 47.0
Os02g0669700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 4.2e-33 145.6 199 39.7
Ca_24671_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 1.6e-32 143.7 155 45.8
HPP92_001929 Vanilla planifolia HOM05D003838 ORTHO05D004444 6.6e-31 138.3 198 41.4
Cpa.g.sc71.4 Carica papaya HOM05D003838 ORTHO05D004444 3.3e-30 136.0 126 50.8
Rhsim12G0057800 Rhododendron simsii HOM05D003838 ORTHO05D004444 1.5e-27 127.1 156 44.2
RcHm_v2.0_Chr4g0390851 Rosa chinensis HOM05D003838 ORTHO05D004444 1.9e-25 120.2 113 52.2
CDE08G1258 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.1e-20 104.4 192 34.9
MD16G1210800 Malus domestica HOM05D003838 ORTHO05D004444 1.8e-20 103.6 106 53.8
Rhsim12G0009000 Rhododendron simsii HOM05D003838 ORTHO05D004444 1.0e-18 97.8 192 31.8
Actinidia06873 Actinidia chinensis HOM05D003838 ORTHO05D004444 3.2e-17 92.8 186 36.6
Peaxi162Scf01029g00016 Petunia axillaris HOM05D003838 ORTHO05D004444 4.6e-16 89.0 200 32.5
FAN17G0891 Fragaria x ananassa HOM05D003838 ORTHO05D004444 5.1e-15 85.5 106 45.3
Sopen04g016210 Solanum pennellii HOM05D003838 ORTHO05D004444 1.1e-14 84.3 86 52.3
CBR_g15988 Chara braunii HOM05D003838 ORTHO05D004444 7.4e-14 81.6 207 28.0
CBR_g31525 Chara braunii HOM05D003838 ORTHO05D004444 9.6e-14 81.3 94 41.5
Solyc04g040053.1 Solanum lycopersicum HOM05D003838 ORTHO05D004444 1.3e-13 80.9 166 30.1
Mapoly0037s0121 Marchantia polymorpha HOM05D003838 ORTHO05D004444 9.0e-12 74.7 176 29.5
Solyc04g040010.3 Solanum lycopersicum HOM05D003838 ORTHO05D004444 5.5e-09 65.5 76 43.4


User provided reference genes

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