Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 2.3e-72 275.4 136 100.0
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 6.6e-59 230.7 136 79.4
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 1.5e-58 229.6 137 81.0
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 4.3e-58 228.0 138 79.7
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 4.3e-58 228.0 138 79.7
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.6e-57 226.1 138 78.3
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 1.6e-57 226.1 138 78.3
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 4.7e-57 224.6 138 77.5
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 4.7e-57 224.6 136 77.9
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 1.4e-56 223.0 137 78.1
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 2.4e-56 222.2 137 79.6
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 3.1e-56 221.9 136 77.2
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 4.0e-56 221.5 139 79.9
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 4.0e-56 221.5 139 79.9
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 4.0e-56 221.5 136 80.1
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 4.0e-56 221.5 136 78.7
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 5.2e-56 221.1 137 78.1
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 5.2e-56 221.1 136 77.2
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 9.0e-56 220.3 134 76.1
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 9.0e-56 220.3 134 76.9
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 9.0e-56 220.3 137 77.4
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 9.0e-56 220.3 138 80.4
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 9.0e-56 220.3 136 80.1
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 9.0e-56 220.3 138 75.4
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 1.2e-55 219.9 136 77.2
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 1.2e-55 219.9 136 77.2
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 2.6e-55 218.8 136 76.5
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 3.4e-55 218.4 136 76.5
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 4.4e-55 218.0 134 77.6
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 4.4e-55 218.0 136 77.2
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 5.8e-55 217.6 136 77.2
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 5.8e-55 217.6 137 75.2
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 5.8e-55 217.6 137 78.1
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 7.6e-55 217.2 136 75.0
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 7.6e-55 217.2 136 75.0
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 1.3e-54 216.5 136 76.5
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 1.7e-54 216.1 136 75.0
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 2.2e-54 215.7 135 75.6
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 2.9e-54 215.3 136 76.5
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 2.9e-54 215.3 134 74.6
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 2.9e-54 215.3 136 78.7
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 2.9e-54 215.3 136 78.7
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 4.9e-54 214.5 136 74.3
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 4.9e-54 214.5 136 74.3
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 8.4e-54 213.8 136 73.5
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 8.4e-54 213.8 137 73.7
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 1.1e-53 213.4 136 76.5
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 1.4e-53 213.0 136 73.5
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 1.9e-53 212.6 147 71.4
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 1.9e-53 212.6 137 75.2
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 2.4e-53 212.2 137 74.5
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 2.4e-53 212.2 136 76.5
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 4.2e-53 211.5 136 74.3
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 5.4e-53 211.1 136 74.3
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 9.3e-53 210.3 138 75.4
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 9.3e-53 210.3 137 73.7
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.2e-52 209.9 136 75.7
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 2.1e-52 209.1 138 72.5
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 2.7e-52 208.8 137 73.7
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 2.7e-52 208.8 136 70.6
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 4.6e-52 208.0 137 73.7
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 6.0e-52 207.6 138 73.2
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 6.0e-52 207.6 138 74.6
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 7.8e-52 207.2 137 72.3
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 7.8e-52 207.2 136 72.1
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 1.0e-51 206.8 136 75.7
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 1.0e-51 206.8 139 72.7
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 1.3e-51 206.5 131 79.4
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 1.7e-51 206.1 138 73.9
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 3.0e-51 205.3 138 71.7
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 3.0e-51 205.3 136 72.1
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 3.9e-51 204.9 143 70.6
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 5.1e-51 204.5 135 75.6
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 5.1e-51 204.5 138 71.7
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 6.6e-51 204.1 133 72.9
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 6.6e-51 204.1 139 71.9
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 8.7e-51 203.8 138 71.7
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 2.5e-50 202.2 137 71.5
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 2.5e-50 202.2 138 70.3
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 2.5e-50 202.2 139 71.2
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 7.3e-50 200.7 138 71.7
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 1.3e-49 199.9 136 71.3
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.6e-49 199.5 133 72.2
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 2.1e-49 199.1 119 79.8
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 2.8e-49 198.7 146 68.5
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 2.8e-49 198.7 146 68.5
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 2.8e-49 198.7 146 68.5
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 2.8e-49 198.7 146 68.5
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 4.8e-49 198.0 133 70.7
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 4.8e-49 198.0 133 72.2
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 6.2e-49 197.6 131 72.5
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 2.4e-48 195.7 131 73.3
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 2.4e-48 195.7 131 73.3
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 4.0e-48 194.9 137 69.3
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 1.2e-47 193.4 134 68.7
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 4.9e-46 188.0 137 66.4
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 4.2e-45 184.9 137 65.7
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 5.4e-45 184.5 114 71.9
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 9.3e-45 183.7 114 72.8
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 1.6e-44 183.0 115 71.3
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 1.6e-44 183.0 115 71.3
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 2.7e-44 182.2 114 71.9
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 2.7e-44 182.2 115 71.3
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 3.5e-44 181.8 115 70.4
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 6.0e-44 181.0 137 64.2
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 1.0e-43 180.3 126 65.9
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 3.0e-43 178.7 114 69.3
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 3.9e-43 178.3 108 73.1
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 3.9e-43 178.3 108 73.1
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 3.9e-43 178.3 108 73.1
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 6.7e-43 177.6 119 74.8
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 8.7e-43 177.2 143 62.2
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 1.1e-42 176.8 108 72.2
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 1.1e-42 176.8 108 72.2
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 5.6e-42 174.5 120 64.2
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 7.4e-42 174.1 113 76.1
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 2.1e-41 172.6 118 64.4
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 4.8e-41 171.4 110 70.9
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 9.9e-39 163.7 133 63.2
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 6.7e-35 151.0 98 69.4
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 1.5e-34 149.8 137 59.1
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 6.9e-32 141.0 126 54.0
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 1.5e-31 139.8 93 66.7
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 3.4e-31 138.7 86 68.6
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 1.0e-30 137.1 120 62.5
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 4.9e-30 134.8 128 54.7
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 6.7e-27 124.4 112 52.7
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 3.3e-26 122.1 136 53.7
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 3.3e-26 122.1 81 80.2
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 1.6e-25 119.8 122 52.5
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 4.1e-24 115.2 74 73.0
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 6.9e-24 114.4 126 46.8
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 8.5e-22 107.5 72 66.7
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 1.1e-21 107.1 78 70.5
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 4.6e-20 101.7 59 71.2
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 3.9e-19 98.6 99 48.5
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 5.1e-19 98.2 76 60.5
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 8.8e-19 97.4 59 67.8
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.3e-17 93.6 53 79.2
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 4.8e-17 91.7 151 35.1
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 1.1e-16 90.5 70 58.6
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 1.8e-16 89.7 56 76.8
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 1.4e-13 80.1 105 42.9
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 6.1e-12 74.7 59 55.9
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 3.0e-11 72.4 76 53.9
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 3.9e-11 72.0 80 47.5
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 6.7e-11 71.2 142 37.3
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 2.0e-07 59.7 81 42.0


User provided reference genes

Program Settings