Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.3e-131 473.0 228 100.0
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 5.4e-98 361.3 232 77.2
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 4.3e-95 351.7 225 75.1
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 4.5e-92 341.7 214 77.1
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 4.5e-92 341.7 232 72.8
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 7.6e-92 340.9 231 73.2
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 2.9e-91 339.0 231 72.3
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 3.5e-89 332.0 225 73.8
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 1.0e-88 330.5 237 68.4
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 1.0e-88 330.5 226 74.3
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 5.1e-88 328.2 208 75.5
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 5.1e-88 328.2 221 71.9
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 5.1e-88 328.2 203 75.4
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 6.7e-88 327.8 201 77.6
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 3.3e-87 325.5 231 72.7
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 4.3e-87 325.1 215 72.1
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 7.4e-87 324.3 198 78.3
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 9.6e-87 323.9 196 78.6
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 9.6e-87 323.9 230 68.7
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 1.3e-86 323.6 214 76.2
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 1.6e-86 323.2 200 74.5
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 2.8e-86 322.4 222 73.0
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 3.7e-86 322.0 199 79.9
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 3.7e-86 322.0 203 75.4
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 1.1e-85 320.5 219 72.6
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.4e-85 320.1 231 70.6
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 1.8e-85 319.7 193 80.8
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 2.4e-85 319.3 198 77.8
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 3.1e-85 318.9 231 70.6
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 5.3e-85 318.2 196 75.5
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 1.2e-84 317.0 197 79.2
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 1.5e-84 316.6 208 73.6
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 1.5e-84 316.6 192 80.2
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 1.5e-84 316.6 225 68.9
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 1.5e-84 316.6 200 73.5
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 1.5e-84 316.6 207 74.9
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 2.0e-84 316.2 201 75.1
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 2.0e-84 316.2 186 79.6
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 2.0e-84 316.2 205 75.6
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 2.6e-84 315.8 225 69.8
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.4e-84 315.5 198 77.3
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.4e-84 315.5 198 77.3
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 3.4e-84 315.5 215 73.5
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 1.3e-83 313.5 204 76.0
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 1.7e-83 313.2 192 76.6
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 2.2e-83 312.8 192 77.1
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 2.9e-83 312.4 192 76.6
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 2.9e-83 312.4 197 75.1
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 2.9e-83 312.4 197 75.1
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 3.8e-83 312.0 186 76.3
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 1.1e-82 310.5 191 77.0
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 1.4e-82 310.1 186 77.4
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 1.9e-82 309.7 183 78.7
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 1.9e-82 309.7 183 78.7
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 2.5e-82 309.3 183 78.7
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 4.2e-82 308.5 192 75.0
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 5.5e-82 308.1 183 78.1
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 5.5e-82 308.1 183 78.1
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 5.5e-82 308.1 198 74.2
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 7.1e-82 307.8 224 68.8
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 9.3e-82 307.4 187 77.5
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 2.1e-81 306.2 188 75.5
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 3.5e-81 305.4 221 67.9
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 3.5e-81 305.4 203 72.9
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 3.9e-80 302.0 181 76.8
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 5.1e-80 301.6 201 72.1
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 1.9e-79 299.7 177 80.2
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 1.9e-79 299.7 177 80.2
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 1.6e-78 296.6 177 78.5
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.2e-78 296.2 177 78.0
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 8.2e-78 294.3 177 77.4
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 2.4e-77 292.7 223 66.4
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 6.9e-77 291.2 167 81.4
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 5.9e-76 288.1 192 69.8
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.1e-74 283.9 157 83.4
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.4e-74 283.5 205 69.3
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 1.9e-74 283.1 182 73.1
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 4.2e-74 282.0 204 68.1
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 1.4e-72 276.9 306 52.9
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.8e-72 276.6 168 76.8
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 1.1e-71 273.9 222 65.3
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 1.5e-71 273.5 196 67.3
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 2.5e-71 272.7 187 71.1
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 3.7e-70 268.9 221 63.3
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 2.4e-69 266.2 211 63.0
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 5.0e-67 258.5 174 68.4
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 9.4e-66 254.2 202 65.8
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 7.9e-65 251.1 200 65.0
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 2.8e-62 242.7 166 72.9
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 6.3e-62 241.5 141 78.7
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 6.3e-62 241.5 169 63.9
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 1.2e-60 237.3 162 67.3
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 3.2e-58 229.2 160 65.6
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 6.1e-57 224.9 157 68.2
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 6.1e-57 224.9 157 66.9
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 5.7e-55 218.4 197 56.3
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 2.0e-52 209.9 232 54.7
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 4.0e-48 195.7 202 54.5
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 2.6e-47 193.0 124 71.8
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 9.8e-47 191.0 110 83.6
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.7e-46 190.3 147 66.7
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 2.8e-46 189.5 161 62.1
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.8e-46 188.7 147 66.7
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 9.1e-45 184.5 174 60.3
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 8.5e-43 177.9 159 57.9
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 1.6e-41 173.7 173 50.9
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 4.0e-40 169.1 105 75.2
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 5.7e-39 165.2 103 74.8
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 1.7e-38 163.7 103 75.7
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 2.4e-37 159.8 82 89.0
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 4.1e-37 159.1 81 88.9
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.2e-33 147.5 86 77.9
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 4.7e-33 145.6 85 76.5
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 4.7e-33 145.6 85 76.5
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 6.3e-30 135.2 110 64.5
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.7e-28 129.8 84 73.8
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 5.0e-27 125.6 76 73.7
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 3.1e-24 116.3 128 50.0
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 4.0e-24 115.9 64 84.4
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 4.6e-20 102.4 190 37.4


User provided reference genes

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