Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 5.5e-167 590.9 299 100.0
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 3.3e-111 405.6 285 70.5
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.3e-110 403.7 298 69.5
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 1.3e-110 403.7 303 68.0
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.1e-109 400.6 296 68.9
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 2.4e-109 399.4 278 71.6
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 4.5e-108 395.2 299 67.2
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 9.9e-108 394.0 293 67.2
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 1.7e-107 393.3 296 65.9
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 3.8e-107 392.1 278 69.8
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 4.9e-107 391.7 291 67.4
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 8.4e-107 391.0 290 68.6
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.4e-106 390.2 281 68.7
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.9e-106 389.8 291 66.7
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.9e-106 389.8 278 69.8
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 2.4e-106 389.4 305 67.5
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 5.5e-106 388.3 300 66.0
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 7.1e-106 387.9 293 65.5
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 9.3e-106 387.5 257 74.3
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 2.1e-105 386.3 305 65.2
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 3.5e-105 385.6 297 66.0
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.5e-105 385.6 289 66.4
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 3.5e-105 385.6 289 66.4
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 6.0e-105 384.8 293 66.2
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 6.0e-105 384.8 296 65.5
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 7.9e-105 384.4 290 67.9
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.0e-104 384.0 299 63.9
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.3e-104 383.6 261 70.9
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 1.8e-104 383.3 307 64.5
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 2.3e-104 382.9 298 66.4
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.1e-103 380.6 261 72.0
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.1e-103 380.6 298 63.1
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 1.5e-103 380.2 299 65.6
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 1.5e-103 380.2 297 66.0
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.6e-102 376.7 293 64.8
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 8.2e-102 374.4 293 64.5
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 1.1e-101 374.0 290 66.9
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 1.4e-101 373.6 246 73.6
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.4e-101 372.9 299 65.2
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 3.1e-101 372.5 263 70.3
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 3.1e-101 372.5 295 65.1
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 3.1e-101 372.5 306 64.1
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 3.1e-101 372.5 290 66.9
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 4.0e-101 372.1 307 63.8
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 5.3e-101 371.7 247 72.9
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 5.3e-101 371.7 289 65.1
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 6.9e-101 371.3 247 72.9
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 6.9e-101 371.3 247 72.9
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 1.5e-100 370.2 299 64.2
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 7.6e-100 367.9 250 71.2
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 1.0e-99 367.5 247 72.1
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 1.0e-99 367.5 247 72.1
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.9e-99 365.9 297 65.0
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 2.9e-99 365.9 252 71.4
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 3.8e-99 365.5 257 70.0
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 4.9e-99 365.2 297 64.0
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 1.4e-98 363.6 259 69.9
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 1.9e-98 363.2 308 61.7
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 7.1e-98 361.3 283 64.7
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 1.2e-97 360.5 309 62.1
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 2.1e-97 359.8 258 68.6
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 6.0e-97 358.2 219 77.2
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 6.0e-97 358.2 243 69.5
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 1.8e-96 356.7 299 60.9
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.1e-95 354.0 323 59.4
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 3.3e-95 352.4 311 62.4
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 3.3e-95 352.4 308 61.7
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 4.3e-95 352.1 222 74.8
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 3.7e-94 349.0 312 59.6
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 1.4e-93 347.1 313 59.4
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 4.1e-93 345.5 257 65.8
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 5.3e-93 345.1 312 59.3
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.2e-92 344.0 283 64.7
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.9e-90 336.7 305 57.0
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 2.5e-90 336.3 291 58.8
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 3.2e-90 335.9 263 62.7
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 1.6e-89 333.6 267 62.9
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 2.7e-89 332.8 305 58.0
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 7.9e-89 331.3 264 62.9
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 1.0e-88 330.9 234 69.7
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 1.8e-88 330.1 238 67.2
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.8e-88 330.1 263 62.7
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 8.8e-88 327.8 302 57.9
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 9.7e-87 324.3 367 51.2
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 2.6e-84 316.2 209 70.3
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 6.5e-83 311.6 272 59.9
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 5.5e-82 308.5 291 55.0
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 9.4e-82 307.8 257 62.3
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 9.4e-82 307.8 262 62.2
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 1.7e-78 297.0 245 63.3
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 4.1e-77 292.4 258 58.1
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.0e-76 290.0 278 57.6
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.3e-75 287.3 233 63.5
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 1.6e-73 280.4 183 73.2
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 8.0e-73 278.1 327 52.0
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.0e-72 276.2 261 57.9
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.7e-72 275.0 263 57.8
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 4.4e-71 272.3 243 56.4
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 4.8e-70 268.9 255 53.7
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.1e-69 267.7 287 53.3
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 5.9e-68 261.9 158 79.7
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.6e-65 253.8 257 55.3
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 2.7e-65 253.1 197 65.0
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 4.8e-54 215.7 176 63.6
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.0e-43 181.4 100 78.0
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 8.0e-41 171.8 129 65.1
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 7.0e-37 158.7 260 38.1
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.5e-34 151.0 107 67.3
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 3.3e-26 123.2 194 36.1
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.0e-11 75.1 52 73.1
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 1.7e-11 74.3 101 42.6


User provided reference genes

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