Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 5.3e-50 200.7 99 100.0
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 5.2e-37 157.5 94 80.9
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 4.4e-36 154.5 94 80.9
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 5.7e-36 154.1 94 81.9
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 5.4e-34 147.5 94 76.6
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 7.0e-34 147.1 94 77.7
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 2.0e-33 145.6 94 75.5
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 2.7e-33 145.2 94 77.7
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 4.5e-33 144.4 94 74.5
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 7.8e-33 143.7 94 76.6
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 2.3e-32 142.1 94 73.4
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 3.8e-32 141.4 94 73.4
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 3.8e-32 141.4 94 72.3
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.1e-31 139.8 94 73.4
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 1.1e-31 139.8 94 73.4
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 1.5e-31 139.4 92 73.9
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 2.5e-31 138.7 94 73.4
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 2.5e-31 138.7 92 70.7
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 3.3e-31 138.3 92 76.1
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 3.3e-31 138.3 96 72.9
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 5.6e-31 137.5 94 73.4
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 5.6e-31 137.5 84 78.6
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 5.6e-31 137.5 92 73.9
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 7.3e-31 137.1 92 72.8
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 7.3e-31 137.1 92 72.8
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 9.5e-31 136.7 94 72.3
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 9.5e-31 136.7 94 71.3
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 9.5e-31 136.7 92 73.9
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 9.5e-31 136.7 94 70.2
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 1.2e-30 136.3 92 71.7
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 1.2e-30 136.3 92 71.7
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 1.2e-30 136.3 94 72.3
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 1.2e-30 136.3 94 72.3
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 1.2e-30 136.3 94 71.3
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 1.6e-30 136.0 92 71.7
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 1.6e-30 136.0 94 70.2
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 2.1e-30 135.6 94 72.3
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 2.1e-30 135.6 94 71.3
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 2.1e-30 135.6 94 69.1
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 2.8e-30 135.2 143 52.4
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 3.6e-30 134.8 92 71.7
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 4.7e-30 134.4 94 73.4
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 4.7e-30 134.4 93 73.1
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 70.2
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 70.2
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 70.2
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 70.2
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 70.2
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 71.3
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 1.4e-29 132.9 95 70.5
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 1.4e-29 132.9 92 70.7
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 1.4e-29 132.9 92 70.7
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 1.8e-29 132.5 92 73.9
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 1.8e-29 132.5 94 73.4
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 1.8e-29 132.5 88 72.7
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 4.0e-29 131.3 95 69.5
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 4.0e-29 131.3 95 69.5
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 4.0e-29 131.3 95 69.5
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 4.0e-29 131.3 94 66.0
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 5.2e-29 131.0 92 71.7
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 6.8e-29 130.6 94 69.1
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 8.9e-29 130.2 92 70.7
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 1.5e-28 129.4 92 68.5
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 4.4e-28 127.9 95 66.3
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 7.5e-28 127.1 92 70.7
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 9.8e-28 126.7 87 69.0
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 1.7e-27 125.9 92 69.6
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 2.2e-27 125.6 95 66.3
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 2.2e-27 125.6 92 68.5
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 4.9e-27 124.4 70 82.9
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 4.9e-27 124.4 92 67.4
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 1.8e-26 122.5 94 62.8
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 2.4e-26 122.1 95 68.4
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 7.0e-26 120.6 92 67.4
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 9.2e-26 120.2 93 66.7
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.6e-25 119.4 72 77.8
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 2.0e-25 119.0 96 66.7
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 2.0e-25 119.0 97 64.9
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 3.5e-25 118.2 93 63.4
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 5.9e-25 117.5 90 67.8
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 1.3e-24 116.3 94 66.0
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 3.0e-24 115.2 134 50.7
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 8.6e-24 113.6 73 78.1
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 3.3e-23 111.7 71 76.1
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 5.6e-23 110.9 77 71.4
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 7.3e-23 110.5 103 60.2
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 7.3e-23 110.5 93 63.4
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 1.1e-21 106.7 95 61.1
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 3.1e-21 105.1 165 42.4
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 2.6e-20 102.1 97 56.7
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 2.2e-19 99.0 97 58.8
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 8.3e-19 97.1 69 69.6
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 1.1e-18 96.7 66 71.2
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 1.4e-18 96.3 49 89.8
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 2.4e-18 95.5 93 58.1
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 3.5e-17 91.7 53 79.2
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 7.8e-17 90.5 49 83.7
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 5.6e-15 84.3 63 65.1
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 5.6e-15 84.3 66 65.2
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 1.6e-14 82.8 66 57.6
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 2.1e-14 82.4 65 66.2
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 6.2e-14 80.9 49 71.4
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 9.2e-10 67.0 46 71.7
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 1.7e-08 62.8 46 69.6


User provided reference genes

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