Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 2.4e-54 215.7 146 100.0
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 9.6e-48 193.7 144 93.1
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 3.1e-46 188.7 146 89.7
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 2.0e-45 186.0 146 88.4
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 1.7e-44 183.0 144 88.9
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 2.2e-44 182.6 146 82.2
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 2.2e-44 182.6 146 82.2
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.0e-41 173.7 140 66.4
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 1.8e-41 172.9 146 84.9
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 4.8e-39 164.9 142 81.0
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 4.8e-39 164.9 88 89.8
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 6.3e-39 164.5 146 82.9
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 1.4e-38 163.3 146 82.2
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 1.4e-38 163.3 87 92.0
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 2.4e-38 162.5 88 90.9
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 3.1e-38 162.2 88 88.6
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 3.1e-38 162.2 88 88.6
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 6.9e-38 161.0 88 88.6
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 6.9e-38 161.0 88 89.8
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 9.0e-38 160.6 88 89.8
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 9.0e-38 160.6 88 88.6
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 9.0e-38 160.6 88 87.5
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 9.0e-38 160.6 88 89.8
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 1.2e-37 160.2 88 89.8
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 1.2e-37 160.2 88 89.8
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 1.2e-37 160.2 88 87.5
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 1.2e-37 160.2 86 90.7
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 1.2e-37 160.2 132 89.4
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 1.2e-37 160.2 88 86.4
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 1.2e-37 160.2 88 88.6
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 1.5e-37 159.8 88 87.5
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 1.5e-37 159.8 88 88.6
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 1.5e-37 159.8 87 89.7
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 2.0e-37 159.5 88 88.6
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 2.0e-37 159.5 88 87.5
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 2.0e-37 159.5 132 87.9
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 2.0e-37 159.5 88 86.4
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 2.6e-37 159.1 86 89.5
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 2.6e-37 159.1 88 88.6
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 2.6e-37 159.1 88 88.6
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 3.4e-37 158.7 88 87.5
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 3.4e-37 158.7 87 88.5
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 4.5e-37 158.3 88 85.2
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 5.9e-37 157.9 86 89.5
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 5.9e-37 157.9 88 87.5
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 7.7e-37 157.5 88 86.4
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 7.7e-37 157.5 88 86.4
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 1.0e-36 157.1 88 87.5
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 1.0e-36 157.1 88 87.5
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 1.0e-36 157.1 133 87.2
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 1.0e-36 157.1 87 87.4
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 1.3e-36 156.8 88 87.5
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 1.3e-36 156.8 87 88.5
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 1.7e-36 156.4 88 87.5
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 1.7e-36 156.4 87 88.5
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.7e-36 156.4 87 88.5
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.7e-36 156.4 87 88.5
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 2.2e-36 156.0 87 87.4
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 5.0e-36 154.8 87 86.2
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 6.5e-36 154.5 87 85.1
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 6.5e-36 154.5 86 86.0
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 8.5e-36 154.1 84 89.3
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 8.5e-36 154.1 86 84.9
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 2.5e-35 152.5 135 84.4
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 3.2e-35 152.1 84 89.3
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 3.2e-35 152.1 86 84.9
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 4.2e-35 151.8 88 84.1
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 4.2e-35 151.8 88 84.1
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 4.2e-35 151.8 88 84.1
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 4.2e-35 151.8 88 84.1
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 4.2e-35 151.8 88 84.1
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 4.2e-35 151.8 88 84.1
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 4.2e-35 151.8 86 84.9
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 4.2e-35 151.8 86 84.9
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 4.2e-35 151.8 88 84.1
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 4.2e-35 151.8 87 86.2
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 4.2e-35 151.8 85 87.1
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 5.5e-35 151.4 87 85.1
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 5.5e-35 151.4 134 85.1
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 7.2e-35 151.0 87 85.1
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 7.2e-35 151.0 86 84.9
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 9.4e-35 150.6 132 85.6
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 1.2e-34 150.2 87 83.9
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.2e-34 150.2 88 83.0
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 2.7e-34 149.1 143 78.3
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 2.7e-34 149.1 97 79.4
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 3.6e-34 148.7 87 82.8
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 3.6e-34 148.7 87 82.8
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 4.6e-34 148.3 87 82.8
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 4.6e-34 148.3 84 83.3
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 6.1e-34 147.9 133 64.7
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 1.4e-33 146.7 85 83.5
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 1.4e-33 146.7 82 87.8
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 1.1e-32 143.7 80 87.5
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 2.8e-31 139.0 88 80.7
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 6.3e-31 137.9 129 67.4
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 1.2e-29 133.7 79 79.7
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 1.1e-24 117.1 114 58.8
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 1.7e-15 86.7 98 82.7
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 1.5e-11 73.6 108 68.5
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 7.2e-11 71.2 88 53.4
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 2.7e-10 69.3 36 94.4
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 2.8e-07 59.3 47 61.7
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 2.8e-07 59.3 40 72.5
MCO04G309 Micromonas commoda HOM05D007062 ORTHO05D008941 2.4e-06 56.2 52 55.8


User provided reference genes

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