Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 0.0e+00 1372.5 691 100.0
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 5.4e-298 1027.3 684 76.0
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 4.2e-295 1017.7 690 74.8
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 2.3e-288 995.3 685 73.9
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 6.6e-288 993.8 685 73.7
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 2.6e-284 981.9 685 71.5
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 1.7e-275 952.6 715 67.7
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 2.5e-271 938.7 685 69.6
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 2.8e-270 935.3 686 69.2
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 7.5e-268 927.2 686 68.1
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 2.1e-265 919.1 686 68.5
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 3.5e-265 918.3 685 66.7
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 1.0e-264 916.8 686 67.5
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 1.7e-264 916.0 684 66.2
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 1.1e-263 913.3 689 66.9
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 5.6e-263 911.0 695 65.6
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 1.6e-262 909.4 698 65.8
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 2.6e-260 902.1 688 67.0
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 4.4e-260 901.4 684 66.7
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 5.8e-260 901.0 691 66.3
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 7.6e-260 900.6 733 63.8
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 9.9e-260 900.2 690 66.1
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 9.9e-260 900.2 687 67.1
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 1.3e-259 899.8 684 66.7
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 1.7e-259 899.4 683 66.5
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 4.9e-259 897.9 685 65.0
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 4.9e-259 897.9 686 66.8
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 1.4e-258 896.3 689 64.7
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 5.4e-258 894.4 689 66.6
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 7.1e-258 894.0 685 64.8
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 1.2e-257 893.3 681 66.2
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.7e-257 892.1 681 66.1
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 6.0e-257 891.0 689 65.5
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.3e-256 889.0 681 65.6
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 1.5e-255 886.3 691 65.7
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 1.5e-255 886.3 684 65.6
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 1.5e-255 886.3 683 66.2
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 3.3e-255 885.2 689 65.0
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 3.3e-255 885.2 689 65.6
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 4.3e-255 884.8 696 64.4
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 4.3e-255 884.8 685 64.7
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 2.1e-254 882.5 696 63.5
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 2.8e-254 882.1 684 64.6
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 1.4e-253 879.8 682 64.4
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 1.8e-253 879.4 685 64.8
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 8.9e-253 877.1 684 64.2
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 1.2e-252 876.7 691 64.7
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 5.8e-252 874.4 684 63.7
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 1.1e-250 870.2 692 63.7
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 1.9e-250 869.4 685 64.2
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 7.1e-250 867.5 682 63.9
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 2.1e-249 865.9 698 61.6
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 1.7e-248 862.8 693 63.3
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 3.9e-248 861.7 688 62.9
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 1.4e-245 853.2 698 63.2
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 1.5e-244 849.7 687 61.7
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 1.9e-242 842.8 686 60.8
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 9.3e-242 840.5 687 63.6
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 1.2e-241 840.1 698 61.2
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 6.0e-241 837.8 690 62.2
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 6.0e-241 837.8 689 62.1
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 7.9e-241 837.4 691 60.8
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 4.3e-239 831.6 690 62.3
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 3.7e-238 828.6 688 62.5
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 8.1e-238 827.4 688 60.9
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 3.1e-237 825.5 692 60.8
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 4.5e-236 821.6 685 61.3
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 9.9e-236 820.5 692 61.6
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 1.7e-235 819.7 678 63.3
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 4.2e-234 815.1 683 61.5
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 7.1e-234 814.3 696 59.9
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 9.3e-234 813.9 685 60.6
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 1.6e-233 813.1 685 60.9
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 2.1e-233 812.8 686 60.6
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 2.1e-233 812.8 686 60.6
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 3.5e-233 812.0 707 60.1
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 4.6e-233 811.6 702 58.4
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 7.9e-233 810.8 686 60.6
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 2.3e-232 809.3 687 60.1
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 5.3e-229 798.1 671 61.5
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 9.0e-229 797.3 738 56.5
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 1.3e-227 793.5 671 61.5
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 4.9e-227 791.6 603 66.2
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 2.8e-222 775.8 689 59.2
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 4.8e-222 775.0 680 57.8
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 6.1e-217 758.1 685 58.2
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 6.5e-203 711.4 558 63.6
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 3.2e-202 709.1 685 54.2
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 4.5e-188 662.1 694 49.6
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 5.5e-186 655.2 686 50.3
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 6.8e-184 648.3 479 67.6
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 9.8e-183 644.4 438 74.9
Lalb_Chr03g0040541 Lupinus albus HOM05D004953 ORTHO05D006193 1.3e-171 607.4 487 61.8
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 3.4e-159 566.2 693 44.4
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 8.6e-147 525.0 422 64.0
Actinidia33395 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.2e-140 504.6 395 66.1
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 2.3e-139 500.4 699 40.9
Glyma.09G246350 Glycine max HOM05D004953 ORTHO05D006193 1.3e-134 484.6 420 57.9
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 3.1e-128 463.4 693 39.2
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 1.3e-105 388.3 486 43.8
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 1.0e-99 368.6 695 36.0
Actinidia12854 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.0e-99 367.1 261 70.9
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 2.5e-93 347.4 704 31.2
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 4.8e-89 333.2 674 31.8
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 3.5e-71 273.9 202 69.3
FAN15G1853 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.9e-62 244.2 194 61.3
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.4e-56 225.3 195 63.6
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 5.2e-51 206.8 196 60.2
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 6.4e-49 199.9 196 60.2
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 6.8e-43 179.9 464 30.6
Actinidia23343 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.6e-42 177.9 144 63.2
FvH4_3g38850 Fragaria vesca HOM05D004953 ORTHO05D006193 7.5e-34 149.8 118 67.8
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.9e-33 147.9 120 64.2
Actinidia29995 Actinidia chinensis HOM05D004953 ORTHO05D006193 6.8e-27 126.7 250 36.8
FvH4_7g13151 Fragaria vesca HOM05D004953 ORTHO05D006193 2.6e-18 98.2 68 70.6
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.4e-16 92.4 68 77.9
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 7.1e-16 90.1 68 76.5
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 2.7e-15 88.2 150 40.0
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 2.7e-15 88.2 213 30.0
CSS0036997 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 3.5e-15 87.8 67 68.7
CSS0040358 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 6.0e-15 87.0 67 70.1
FAN14G1607 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.8e-12 78.2 60 76.7
FvH4_4g15182 Fragaria vesca HOM05D004953 ORTHO05D006193 1.8e-11 75.5 46 73.9
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 4.9e-09 67.4 228 29.4
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 8.4e-09 66.6 70 45.7
TPR.G3742 Trifolium pratense HOM05D004953 ORTHO05D006193 1.1e-08 66.2 38 76.3
Actinidia04704 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.2e-07 62.8 237 31.6
FAN24G1763 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.6e-07 62.4 38 71.1


User provided reference genes

Program Settings