Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 3.3e-265 917.9 498 100.0
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.3e-149 533.1 373 71.8
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 2.9e-144 516.2 460 60.9
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 4.6e-142 508.8 418 63.4
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 7.9e-142 508.1 397 66.2
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 7.9e-142 508.1 382 68.8
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 1.3e-141 507.3 377 69.5
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 7.4e-140 501.5 393 67.7
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.3e-139 500.7 378 68.3
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 2.6e-137 493.0 371 69.0
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 4.5e-137 492.3 378 65.3
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 3.2e-135 486.1 343 73.5
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 3.2e-135 486.1 452 58.6
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 5.5e-135 485.3 378 64.8
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 5.5e-135 485.3 458 61.6
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.6e-134 483.8 376 66.8
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 2.1e-134 483.4 385 64.2
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 2.1e-134 483.4 401 65.3
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 2.1e-134 483.4 382 65.7
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.3e-133 480.7 368 68.5
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 6.7e-133 478.4 368 67.9
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 2.5e-132 476.5 368 67.9
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 2.5e-132 476.5 391 65.2
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 5.7e-132 475.3 378 66.1
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 5.7e-132 475.3 372 65.1
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 7.4e-132 474.9 373 67.3
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.3e-131 474.2 377 64.2
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.6e-131 473.8 394 61.9
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 1.6e-131 473.8 376 63.3
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 4.8e-131 472.2 376 65.2
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 6.3e-131 471.9 349 69.6
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 6.3e-131 471.9 376 64.4
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 1.1e-130 471.1 380 65.5
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 1.4e-130 470.7 376 64.6
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 5.9e-129 465.3 383 61.1
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 7.6e-129 464.9 382 64.1
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 1.0e-128 464.5 392 62.2
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 1.3e-128 464.2 461 56.0
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.1e-127 461.1 384 63.5
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.5e-127 459.9 382 62.8
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.2e-126 457.6 366 63.7
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 1.2e-126 457.6 380 63.9
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 2.1e-126 456.8 360 66.9
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 2.7e-126 456.4 389 62.5
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 2.7e-126 456.4 377 62.9
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 4.6e-126 455.7 339 69.3
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 7.9e-126 454.9 389 62.7
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 7.9e-126 454.9 384 63.8
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 1.0e-125 454.5 343 66.8
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 3.0e-125 453.0 381 64.0
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 3.9e-125 452.6 383 62.7
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 6.7e-125 451.8 382 61.3
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 1.9e-124 450.3 382 63.9
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 2.5e-124 449.9 349 67.0
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 2.5e-124 449.9 384 62.5
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 7.4e-124 448.4 373 61.7
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.3e-123 447.6 345 68.1
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 1.6e-123 447.2 369 62.1
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 2.8e-123 446.4 373 63.5
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 4.8e-123 445.7 396 63.4
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 8.2e-123 444.9 396 62.6
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.4e-122 444.1 349 65.3
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 9.0e-122 441.4 359 64.1
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 5.9e-121 438.7 373 60.3
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 5.9e-121 438.7 359 63.8
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 1.3e-120 437.6 387 61.5
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 2.2e-120 436.8 373 60.1
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 2.9e-120 436.4 372 60.5
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 3.8e-120 436.0 381 61.9
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 6.5e-120 435.3 373 60.1
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 8.5e-120 434.9 374 59.6
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 5.5e-119 432.2 370 63.0
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.2e-118 431.0 374 59.9
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.2e-118 431.0 375 59.5
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 3.6e-118 429.5 354 66.1
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 3.6e-118 429.5 381 61.4
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 6.1e-118 428.7 379 59.1
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.4e-117 427.6 370 58.6
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 1.8e-117 427.2 379 59.4
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 1.8e-117 427.2 369 60.2
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 1.8e-117 427.2 405 60.2
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 3.9e-117 426.0 348 62.1
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 5.1e-117 425.6 332 66.6
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 8.8e-117 424.9 348 62.1
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 1.1e-116 424.5 350 64.3
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.4e-116 421.8 344 65.1
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 7.4e-116 421.8 369 61.5
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 7.4e-116 421.8 380 60.5
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 2.2e-115 420.2 342 61.1
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 1.4e-114 417.5 315 69.2
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 4.2e-111 406.0 343 59.8
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 5.5e-111 405.6 295 67.8
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 1.6e-102 377.5 375 56.3
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 5.5e-95 352.4 373 53.6
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 5.7e-92 342.4 382 48.2
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 2.5e-87 327.0 245 69.0
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 4.0e-85 319.7 261 63.6
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 7.5e-84 315.5 365 48.2
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 2.0e-81 307.4 353 51.6
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.1e-78 297.4 214 72.9
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 3.9e-72 276.6 206 68.9
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 3.6e-70 270.0 214 67.3
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 9.2e-66 255.4 348 44.0
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 4.3e-63 246.5 368 40.8
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 8.9e-61 238.8 381 36.7
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 6.4e-59 232.6 224 54.0
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 5.6e-55 219.5 351 40.2
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 2.4e-50 204.1 170 61.8
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 6.4e-35 152.9 176 51.7
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 9.9e-28 129.0 245 35.9
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 3.8e-27 127.1 72 81.9
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 9.3e-26 122.5 93 60.2
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 6.7e-24 116.3 102 57.8
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 7.6e-20 102.8 116 50.0
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 2.9e-19 100.9 135 42.2
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.9e-18 98.2 163 44.2
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 5.7e-15 86.7 121 43.8
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 9.6e-15 85.9 379 25.6
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 8.2e-14 82.8 359 28.1
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 2.2e-06 58.2 36 69.4


User provided reference genes

Program Settings