Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004171 Daucus carota HOM05D002129 ORTHO05D002188 4.6e-278 960.7 514 100.0
PGSC0003DMG400004988 Solanum tuberosum HOM05D002129 ORTHO05D002188 2.2e-22 111.3 529 27.0
Nitab4.5_0002944g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 3.8e-22 110.5 410 29.8
Nitab4.5_0006656g0010 Nicotiana tabacum HOM05D002129 ORTHO05D002188 3.8e-22 110.5 480 27.5
CAN.G26.3 Capsicum annuum HOM05D002129 ORTHO05D002188 4.2e-21 107.1 428 29.0
Peaxi162Scf00117g00131 Petunia axillaris HOM05D002129 ORTHO05D002188 4.2e-21 107.1 345 28.7
HanXRQChr10g0292651 Helianthus annuus HOM05D002129 ORTHO05D002188 7.1e-21 106.3 605 24.8
Cc08_g15770 Coffea canephora HOM05D002129 ORTHO05D002188 2.7e-20 104.4 603 24.2
Nitab4.5_0005112g0010 Nicotiana tabacum HOM05D002129 ORTHO05D002188 5.1e-19 100.1 381 27.0
Sopen12g028580 Solanum pennellii HOM05D002129 ORTHO05D002188 5.1e-19 100.1 533 25.3
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 1.9e-18 98.2 605 25.0
Solyc12g056060.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 3.7e-17 94.0 522 24.7
Oeu061086.1 Olea europaea HOM05D002129 ORTHO05D002188 6.2e-17 93.2 675 23.9
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 3.1e-16 90.9 741 23.3
FAN04G1467 Fragaria x ananassa HOM05D002129 ORTHO05D002188 4.0e-16 90.5 464 23.5
Manes.01G046000 Manihot esculenta HOM05D002129 ORTHO05D002188 4.0e-16 90.5 383 26.9
FAN08G2732 Fragaria x ananassa HOM05D002129 ORTHO05D002188 6.9e-16 89.7 464 24.4
FvH4_5g04071 Fragaria vesca HOM05D002129 ORTHO05D002188 1.5e-15 88.6 428 23.6
Potri.003G137300 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.0e-15 88.2 497 24.5
Nitab4.5_0002213g0050 Nicotiana tabacum HOM05D002129 ORTHO05D002188 3.4e-15 87.4 339 25.1
FAN18G1710 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.3e-14 85.5 464 23.1
COL.COLO4_21719 Corchorus olitorius HOM05D002129 ORTHO05D002188 3.8e-14 84.0 367 27.5
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 6.5e-14 83.2 379 26.4
Thecc.03G293100 Theobroma cacao HOM05D002129 ORTHO05D002188 6.5e-14 83.2 539 25.2
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 4.2e-13 80.5 303 28.1
Duzib084G0477 Durio zibethinus HOM05D002129 ORTHO05D002188 7.1e-13 79.7 564 24.8
MD06G1102200 Malus domestica HOM05D002129 ORTHO05D002188 9.3e-13 79.3 509 23.8
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.1e-12 78.2 323 29.1
CAN.G792.47 Capsicum annuum HOM05D002129 ORTHO05D002188 4.6e-12 77.0 510 24.1
Actinidia01396 Actinidia chinensis HOM05D002129 ORTHO05D002188 6.0e-12 76.6 746 22.0
TAR374G1003 Trochodendron aralioides HOM05D002129 ORTHO05D002188 6.0e-12 76.6 60 70.0
PGSC0003DMG400005787 Solanum tuberosum HOM05D002129 ORTHO05D002188 1.8e-11 75.1 247 27.5
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 2.3e-11 74.7 381 25.7
AUR62010808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 5.1e-11 73.6 542 24.7
Sabra03G0098800 Salix brachista HOM05D002129 ORTHO05D002188 5.1e-11 73.6 498 23.1
Sopen08g004110 Solanum pennellii HOM05D002129 ORTHO05D002188 1.1e-10 72.4 237 28.3
ECA246G1519 Erigeron canadensis HOM05D002129 ORTHO05D002188 1.5e-10 72.0 312 30.4
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 1.9e-10 71.6 396 26.8
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 2.5e-10 71.2 398 24.9
FAN18G4347 Fragaria x ananassa HOM05D002129 ORTHO05D002188 3.3e-10 70.9 356 22.8
HanXRQChr17g0535111 Helianthus annuus HOM05D002129 ORTHO05D002188 4.3e-10 70.5 78 48.7
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 5.7e-10 70.1 358 23.5
Gohir.A08G099784 Gossypium hirsutum HOM05D002129 ORTHO05D002188 5.7e-10 70.1 535 26.5
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 5.7e-10 70.1 305 26.6
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 7.4e-10 69.7 229 27.9
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 1.3e-09 68.9 277 26.0
QL12p009828 Quercus lobata HOM05D002129 ORTHO05D002188 1.6e-09 68.6 627 23.9
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 2.1e-09 68.2 294 25.2
Gorai.004G135400 Gossypium raimondii HOM05D002129 ORTHO05D002188 2.1e-09 68.2 429 25.9
QL12p010595 Quercus lobata HOM05D002129 ORTHO05D002188 2.8e-09 67.8 627 23.9
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 4.8e-09 67.0 302 26.2
MD14G1121400 Malus domestica HOM05D002129 ORTHO05D002188 4.8e-09 67.0 373 23.9
QL02p031447 Quercus lobata HOM05D002129 ORTHO05D002188 1.1e-08 65.9 575 24.0
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 1.8e-08 65.1 327 23.2
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 5.3e-08 63.5 326 25.2
Migut.E01235 Erythranthe guttata HOM05D002129 ORTHO05D002188 6.9e-08 63.2 73 47.9
RcHm_v2.0_Chr7g0195441 Rosa chinensis HOM05D002129 ORTHO05D002188 6.9e-08 63.2 331 23.9
Atru.chr9.2043 Acer truncatum HOM05D002129 ORTHO05D002188 9.0e-08 62.8 306 25.5
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 1.2e-07 62.4 305 23.3
TAR374G0015 Trochodendron aralioides HOM05D002129 ORTHO05D002188 2.0e-07 61.6 264 26.9
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 2.6e-07 61.2 307 28.7
Duzib205G1563 Durio zibethinus HOM05D002129 ORTHO05D002188 3.4e-07 60.8 246 30.1
unitig_748.g7418 Utricularia gibba HOM05D002129 ORTHO05D002188 3.4e-07 60.8 387 24.3
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 4.5e-07 60.5 371 28.3
Solyc08g008260.2 Solanum lycopersicum HOM05D002129 ORTHO05D002188 4.5e-07 60.5 513 23.4
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 5.9e-07 60.1 153 35.3
Oeu042387.1 Olea europaea HOM05D002129 ORTHO05D002188 5.9e-07 60.1 311 24.1
MBI07_g09921_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 7.6e-07 59.7 415 24.1
CSS0006894 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.0e-06 59.3 288 31.2
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 1.3e-06 58.9 215 32.6
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 1.7e-06 58.5 149 34.9
Duzib068G0910 Durio zibethinus HOM05D002129 ORTHO05D002188 2.2e-06 58.2 534 23.8
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.9e-06 57.8 224 26.3
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 2.9e-06 57.8 385 24.7
Sc01g0010120 Simmondsia chinensis HOM05D002129 ORTHO05D002188 2.9e-06 57.8 470 21.5
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.8e-06 57.4 122 30.3
Lj8P210T83 Lonicera japonica HOM05D002129 ORTHO05D002188 6.5e-06 56.6 224 33.0
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 8.5e-06 56.2 387 26.4
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 8.5e-06 56.2 386 23.3
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 8.5e-06 56.2 270 29.3


User provided reference genes

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