Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 9.2e-90 333.6 173 100.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 2.7e-73 278.9 173 85.0
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 3.9e-72 275.0 174 82.8
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 1.9e-71 272.7 174 82.8
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 3.3e-71 271.9 178 82.6
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 5.6e-71 271.2 173 80.9
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 7.3e-71 270.8 173 81.5
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 6.2e-70 267.7 173 79.2
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 1.1e-69 266.9 173 79.8
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 1.4e-69 266.5 174 78.2
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.8e-69 266.2 173 80.9
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.8e-69 266.2 173 80.3
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 2.4e-69 265.8 173 80.3
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 4.0e-69 265.0 173 80.3
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 4.0e-69 265.0 175 80.0
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 6.9e-69 264.2 174 80.5
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 6.9e-69 264.2 173 78.0
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 6.9e-69 264.2 173 78.0
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 6.9e-69 264.2 173 78.0
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 6.9e-69 264.2 173 78.0
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 1.5e-68 263.1 174 80.5
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 4.5e-68 261.5 175 78.9
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 5.8e-68 261.2 173 78.6
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 9.9e-68 260.4 173 79.2
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 9.9e-68 260.4 173 80.9
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 1.3e-67 260.0 174 77.0
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 3.8e-67 258.5 173 79.2
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 3.8e-67 258.5 176 79.0
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 4.9e-67 258.1 173 76.3
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 8.4e-67 257.3 174 78.2
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 1.1e-66 256.9 173 76.3
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 1.9e-66 256.1 174 78.7
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 3.2e-66 255.4 175 78.3
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 7.1e-66 254.2 175 78.9
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 2.7e-65 252.3 172 75.6
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 3.5e-65 251.9 176 76.1
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 1.0e-64 250.4 174 77.6
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 3.0e-64 248.8 175 76.6
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 3.0e-64 248.8 175 76.6
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 3.0e-64 248.8 175 77.1
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 3.9e-64 248.4 166 78.9
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 3.9e-64 248.4 173 75.7
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 5.1e-64 248.1 174 75.9
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 5.1e-64 248.1 173 75.7
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 6.7e-64 247.7 173 76.9
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 8.7e-64 247.3 174 77.0
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.7e-64 247.3 174 77.0
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.7e-64 247.3 174 77.0
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 1.5e-63 246.5 173 75.7
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 2.5e-63 245.7 167 78.4
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.3e-63 245.0 174 76.4
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 4.3e-63 245.0 173 75.1
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 7.4e-63 244.2 175 73.7
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 9.6e-63 243.8 174 74.1
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 9.6e-63 243.8 173 75.7
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 1.6e-62 243.0 174 75.9
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 1.6e-62 243.0 173 74.6
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.6e-62 243.0 174 75.3
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 2.8e-62 242.3 175 75.4
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 9.0e-61 237.3 178 72.5
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 2.6e-60 235.7 168 75.6
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 2.6e-60 235.7 165 76.4
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 7.6e-60 234.2 174 73.6
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 1.3e-59 233.4 176 72.2
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 1.3e-59 233.4 177 72.9
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 1.4e-58 229.9 175 71.4
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 9.3e-58 227.3 175 70.3
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 9.3e-58 227.3 175 70.3
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 9.3e-58 227.3 175 70.3
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-57 226.5 175 69.7
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 2.1e-57 226.1 175 69.7
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 2.1e-57 226.1 175 69.7
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 3.5e-57 225.3 175 69.7
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 6.0e-57 224.6 175 69.1
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 6.0e-57 224.6 175 69.1
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 1.0e-56 223.8 174 70.7
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 1.3e-56 223.4 175 68.0
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.8e-56 223.0 175 68.6
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.8e-56 223.0 175 68.6
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 2.3e-56 222.6 176 68.2
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 3.0e-56 222.2 175 68.6
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 1.1e-55 220.3 153 76.5
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 2.5e-55 219.2 175 68.0
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 9.6e-55 217.2 176 66.5
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 5.8e-52 208.0 169 71.6
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 5.8e-52 208.0 151 76.8
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 1.0e-51 207.2 174 64.9
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 2.2e-51 206.1 138 75.4
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 5.0e-51 204.9 173 65.3
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 4.2e-50 201.8 172 65.1
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 4.2e-50 201.8 151 74.2
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 1.0e-48 197.2 140 70.7
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 3.0e-48 195.7 178 59.0
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 3.7e-46 188.7 149 67.8
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 1.4e-45 186.8 153 67.3
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 9.0e-45 184.1 177 57.1
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 3.2e-42 175.6 138 74.6
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 5.5e-42 174.9 164 61.0
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 2.1e-41 172.9 174 59.8
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 2.3e-40 169.5 144 70.8
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 1.5e-39 166.8 180 54.4
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.4e-37 160.2 137 66.4
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 3.1e-37 159.1 137 65.7
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 4.1e-37 158.7 117 74.4
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 6.1e-33 144.8 155 56.8
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 1.0e-32 144.1 113 71.7
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 1.8e-32 143.3 106 75.5
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.5e-31 140.2 108 75.9
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 2.4e-29 132.9 113 69.0
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.1e-23 114.0 172 40.7
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.7e-22 110.2 105 65.7
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 2.2e-22 109.8 165 43.6
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 5.3e-21 105.1 106 61.3
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 1.1e-18 97.4 71 71.8
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.6e-17 93.6 83 66.3
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 1.4e-16 90.5 71 67.6
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 6.8e-16 88.2 82 63.4
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 6.3e-14 81.6 120 49.2
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-12 77.4 60 68.3
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.6e-12 77.0 60 68.3
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 2.7e-12 76.3 60 68.3
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 2.7e-12 76.3 107 49.5
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 3.5e-12 75.9 60 66.7
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 3.5e-12 75.9 71 60.6
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 3.5e-12 75.9 81 59.3
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 1.3e-11 73.9 60 66.7
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 2.9e-11 72.8 61 67.2
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.5e-10 70.5 60 66.7
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 9.4e-10 67.8 64 62.5
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 1.6e-09 67.0 93 49.5
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 2.7e-09 66.2 76 55.3
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 6.1e-09 65.1 70 54.3
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 2.6e-07 59.7 43 74.4
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 4.4e-07 58.9 43 74.4
BcaC02g08205 Brassica carinata HOM05D005631 ORTHO05D006765 5.7e-07 58.5 47 66.0
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 9.8e-07 57.8 43 72.1
Sabra15G0067400 Salix brachista HOM05D003748 ORTHO05D004108 9.8e-07 57.8 82 46.3
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.3e-06 57.4 46 73.9
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 1.3e-06 57.4 145 33.8
Sabra06G0178600 Salix brachista HOM05D005631 ORTHO05D006765 2.2e-06 56.6 57 61.4
Sabra10G0082900 Salix brachista HOM05D005631 ORTHO05D006765 2.2e-06 56.6 46 67.4
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 6.3e-06 55.1 101 43.6
Sabra16G0093500 Salix brachista HOM05D005274 ORTHO05D007424 6.3e-06 55.1 46 65.2


User provided reference genes

Program Settings