Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 0.0e+00 3038.1 1714 100.0
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 9.9e-176 622.5 1859 34.6
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 7.8e-165 586.3 940 46.7
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 2.1e-162 578.2 863 48.2
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 1.8e-161 575.1 884 48.0
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 1.2e-160 572.4 880 48.4
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 7.6e-160 569.7 828 50.0
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 5.6e-155 553.5 871 47.3
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 1.2e-152 545.8 1635 35.0
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 7.6e-152 543.1 912 45.3
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 1.3e-151 542.3 1699 32.7
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 2.2e-151 541.6 931 45.4
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 4.9e-151 540.4 1888 32.7
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 7.1e-150 536.6 879 46.9
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 9.3e-150 536.2 934 45.0
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 4.6e-149 533.9 777 50.2
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 1.0e-148 532.7 921 45.2
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 5.1e-148 530.4 829 48.4
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 8.7e-148 529.6 1158 38.9
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 1.9e-147 528.5 829 48.4
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.3e-146 525.8 830 48.3
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 2.4e-145 521.5 1691 33.4
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 6.9e-145 520.0 939 44.2
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 1.5e-144 518.8 940 45.0
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.6e-144 518.1 878 46.8
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 4.5e-144 517.3 830 48.2
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 9.9e-144 516.2 1022 42.7
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 3.8e-143 514.2 1003 42.6
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 9.3e-142 509.6 839 46.6
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 4.6e-141 507.3 829 47.2
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 7.9e-141 506.5 1469 35.6
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 1.3e-140 505.8 921 43.5
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 9.6e-139 499.6 950 43.4
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 1.5e-136 492.3 974 42.3
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 1.3e-135 489.2 933 43.4
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 2.5e-134 485.0 1639 32.9
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 2.5e-134 485.0 874 43.6
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 3.2e-134 484.6 916 43.1
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 7.1e-134 483.4 923 42.7
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 1.2e-133 482.6 865 44.4
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 1.0e-132 479.6 937 42.9
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 2.3e-132 478.4 955 41.8
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 3.9e-132 477.6 923 42.0
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 1.1e-131 476.1 844 45.9
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 1.1e-129 469.5 1326 33.3
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 1.4e-129 469.2 867 43.7
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 1.8e-129 468.8 1302 36.3
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 2.4e-129 468.4 815 46.7
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 3.1e-129 468.0 872 43.2
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 2.0e-128 465.3 1007 40.8
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 3.4e-128 464.5 917 41.3
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 2.2e-127 461.8 868 44.8
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 3.8e-127 461.1 868 44.8
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 1.1e-126 459.5 1268 36.1
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 4.2e-126 457.6 839 44.6
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 1.4e-124 452.6 925 42.5
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 2.0e-123 448.7 995 41.2
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 1.7e-122 445.7 817 45.0
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 1.7e-122 445.7 955 39.7
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 2.2e-122 445.3 1115 37.3
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 3.7e-122 444.5 817 44.9
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 3.8e-119 434.5 855 40.9
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 1.6e-117 429.1 877 40.4
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 4.7e-117 427.6 819 41.3
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 6.1e-117 427.2 933 40.6
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 7.9e-117 426.8 420 65.7
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 1.4e-116 426.0 1029 39.3
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 3.0e-116 424.9 884 38.8
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 5.1e-116 424.1 884 38.8
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 8.8e-116 423.3 812 43.5
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 4.4e-115 421.0 1032 34.4
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 2.2e-114 418.7 561 48.8
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 8.2e-114 416.8 798 43.5
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 4.5e-112 411.0 1172 34.8
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 4.2e-110 404.4 830 39.4
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.7e-109 401.7 966 38.2
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 4.4e-107 394.4 847 41.1
SalBow7G2018 Salvia bowleyana HOM05D000237 ORTHO05D006530 2.8e-106 391.7 692 42.3
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 3.7e-106 391.3 871 40.3
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 8.2e-106 390.2 845 40.8
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 2.9e-103 381.7 1012 37.0
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 4.4e-99 367.9 1034 35.4
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 5.7e-99 367.5 415 60.2
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 7.5e-99 367.1 1007 35.9
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 7.5e-99 367.1 1659 29.7
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 1.3e-98 366.3 1649 29.4
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 2.2e-98 365.5 1591 29.7
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 1.4e-97 362.8 1013 35.6
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 1.8e-97 362.5 1591 29.6
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 9.1e-97 360.1 832 41.1
CARHR021940 Cardamine hirsuta HOM05D000237 ORTHO05D006530 5.9e-96 357.5 706 36.0
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 5.9e-96 357.5 1545 30.4
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 1.0e-95 356.7 1598 31.0
AT1G21580 Arabidopsis thaliana HOM05D000237 ORTHO05D006530 1.6e-93 349.4 747 35.3
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 1.5e-91 342.8 844 37.8
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 9.8e-91 340.1 960 34.4
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 4.2e-86 324.7 458 46.5
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 6.8e-84 317.4 873 36.5
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 1.1e-81 310.1 905 35.0
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 9.2e-81 307.0 823 38.3
ATR1001G008 Amborella trichopoda HOM05D000237 ORTHO05D006530 3.5e-80 305.1 729 36.2
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 3.5e-80 305.1 905 35.1
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 1.9e-78 299.3 768 37.2
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 2.8e-77 295.4 333 61.0
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 1.4e-76 293.1 895 34.7
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 4.0e-76 291.6 828 35.5
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 2.0e-75 289.3 552 44.0
SEGI_16153 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 8.9e-68 263.8 256 55.9
Sed0005866 Sechium edule HOM05D000237 ORTHO05D006530 7.5e-67 260.8 630 34.3
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 2.2e-66 259.2 393 52.2
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 4.6e-64 251.5 569 36.6
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 1.9e-57 229.6 283 60.1
Manes.18G083000 Manihot esculenta HOM05D000237 ORTHO05D006530 1.0e-55 223.8 1053 29.0
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 1.3e-47 196.8 432 43.1
CBR_g18950 Chara braunii HOM05D000237 ORTHO05D006530 5.1e-47 194.9 386 39.1
CARHR070760 Cardamine hirsuta HOM05D000237 ORTHO05D006530 2.4e-41 176.0 219 47.0
TPR.G40837 Trifolium pratense HOM05D000237 ORTHO05D006530 1.5e-35 156.8 140 62.1
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 2.1e-32 146.4 218 41.3
TPR.G4655 Trifolium pratense HOM05D000237 ORTHO05D013217 7.9e-32 144.4 105 70.5
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 1.9e-30 139.8 790 26.1
PGSC0003DMG401025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 1.6e-29 136.7 530 31.5
PGSC0003DMG402025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 2.0e-27 129.8 135 53.3
Lalb_Chr11g0066211 Lupinus albus HOM05D000237 ORTHO05D006530 3.4e-27 129.0 202 56.9
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 6.5e-26 124.8 510 34.9
AUR62007706 Chenopodium quinoa HOM05D000237 ORTHO05D006530 1.6e-24 120.2 512 29.1
Lj4A681T41 Lonicera japonica HOM05D000237 ORTHO05D006530 5.1e-23 115.2 137 48.9
Oeu047172.1 Olea europaea HOM05D000237 ORTHO05D006530 4.8e-21 108.6 240 35.4
vmacro21124 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 9.0e-20 104.4 440 28.4
Oeu030983.1 Olea europaea HOM05D000237 ORTHO05D006530 1.0e-18 100.9 87 65.5
Oeu045950.1 Olea europaea HOM05D000237 ORTHO05D006530 3.2e-17 95.9 372 31.2
ATR0172G001 Amborella trichopoda HOM05D000237 ORTHO05D006530 3.9e-15 89.0 126 42.1
Cpa.g.sc1156.5 Carica papaya HOM05D000237 ORTHO05D006530 1.3e-10 73.9 372 27.4
SEGI_02602 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 4.6e-08 65.5 141 32.6
Oeu047175.1 Olea europaea HOM05D000237 ORTHO05D006530 3.0e-07 62.8 131 33.6


User provided reference genes

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