Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002908 Daucus carota HOM05D001654 ORTHO05D008085 1.4e-47 192.6 97 100.0
GSVIVG01028158001 Vitis vinifera HOM05D001654 ORTHO05D008085 2.0e-41 172.2 95 88.4
Dinv00086 Davidia involucrata HOM05D001654 ORTHO05D008085 7.6e-41 170.2 97 85.6
Dinv12117 Davidia involucrata HOM05D001654 ORTHO05D008085 7.6e-41 170.2 97 85.6
CiPaw.07G120500 Carya illinoinensis HOM05D001654 ORTHO05D008085 1.3e-40 169.5 95 85.3
Hma1.2p1_0965F.1_g242120 Hydrangea macrophylla HOM05D001654 ORTHO05D008085 2.9e-40 168.3 94 88.3
Atru.chr5.945 Acer truncatum HOM05D001654 ORTHO05D008085 1.1e-39 166.4 95 84.2
TWI14G0226 Tripterygium wilfordii HOM05D001654 ORTHO05D008085 1.4e-39 166.0 97 84.5
Actinidia25865 Actinidia chinensis HOM05D001654 ORTHO05D008085 3.2e-39 164.9 95 83.2
Prupe.3G007000 Prunus persica HOM05D001654 ORTHO05D008085 5.4e-39 164.1 95 85.3
FAN23G2580 Fragaria x ananassa HOM05D001654 ORTHO05D008085 7.1e-39 163.7 95 84.2
FvH4_1g26790 Fragaria vesca HOM05D001654 ORTHO05D008085 9.3e-39 163.3 95 84.2
RcHm_v2.0_Chr3g0487011 Rosa chinensis HOM05D001654 ORTHO05D008085 9.3e-39 163.3 95 84.2
ClCG09G004900 Citrullus lanatus HOM05D001654 ORTHO05D008085 1.2e-38 162.9 97 81.4
MELO3C015905.2 Cucumis melo HOM05D001654 ORTHO05D008085 1.2e-38 162.9 97 81.4
Manes.05G012600 Manihot esculenta HOM05D001654 ORTHO05D008085 1.2e-38 162.9 94 85.1
Lalb_Chr04g0260031 Lupinus albus HOM05D001654 ORTHO05D008085 1.6e-38 162.5 97 80.4
FAN28G2334 Fragaria x ananassa HOM05D001654 ORTHO05D008085 2.1e-38 162.2 95 83.2
Cfa001520 Carpinus fangiana HOM05D001654 ORTHO05D008085 2.7e-38 161.8 95 84.2
Haze_17021 Corylus avellana HOM05D001654 ORTHO05D008085 2.7e-38 161.8 95 84.2
Lj2A1210G30 Lonicera japonica HOM05D001654 ORTHO05D008085 2.7e-38 161.8 95 85.3
Nitab4.5_0010752g0010 Nicotiana tabacum HOM05D001654 ORTHO05D008085 3.5e-38 161.4 97 83.5
CSS0008228 Camellia sinensis var. sinensis HOM05D001654 ORTHO05D008085 4.6e-38 161.0 96 83.3
Aqoxy2G02641 Aquilegia oxysepala HOM05D001654 ORTHO05D008085 7.8e-38 160.2 97 79.4
Ciclev10022131m.g Citrus clementina HOM05D001654 ORTHO05D008085 1.0e-37 159.8 95 81.1
Lj1g0022661 Lotus japonicus HOM05D001654 ORTHO05D008085 1.0e-37 159.8 96 82.3
MD17G1279000 Malus domestica HOM05D001654 ORTHO05D008085 1.0e-37 159.8 95 83.2
QL12p018829 Quercus lobata HOM05D001654 ORTHO05D008085 1.0e-37 159.8 95 86.3
CANSAT25G2218 Cannabis sativa HOM05D001654 ORTHO05D008085 1.3e-37 159.5 93 83.9
Rhsim01G0292400 Rhododendron simsii HOM05D001654 ORTHO05D008085 1.3e-37 159.5 97 83.5
TPR.G4072 Trifolium pratense HOM05D001654 ORTHO05D008085 1.3e-37 159.5 98 81.6
Psat3g019000 Pisum sativum HOM05D001654 ORTHO05D008085 1.7e-37 159.1 98 80.6
TAR365G0959 Trochodendron aralioides HOM05D001654 ORTHO05D008085 1.7e-37 159.1 97 78.4
CAN.G293.5 Capsicum annuum HOM05D001654 ORTHO05D008085 2.3e-37 158.7 95 82.1
Duzib138G0592 Durio zibethinus HOM05D001654 ORTHO05D008085 2.3e-37 158.7 95 81.1
Nitab4.5_0000222g0090 Nicotiana tabacum HOM05D001654 ORTHO05D008085 2.3e-37 158.7 97 82.5
MSTRG.21710 Avicennia marina HOM05D001654 ORTHO05D008085 3.0e-37 158.3 97 79.4
MBI19_g03284_MAGBIO Magnolia biondii HOM05D001654 ORTHO05D008085 3.0e-37 158.3 95 81.1
PSO210G1196 Papaver somniferum HOM05D001654 ORTHO05D008085 3.0e-37 158.3 97 80.4
PSO761G0367 Papaver somniferum HOM05D001654 ORTHO05D008085 3.0e-37 158.3 97 80.4
PGR083G0503 Punica granatum HOM05D001654 ORTHO05D008085 3.0e-37 158.3 95 81.1
Sopen01g031000 Solanum pennellii HOM05D001654 ORTHO05D008085 3.0e-37 158.3 95 83.2
PGSC0003DMG400009020 Solanum tuberosum HOM05D001654 ORTHO05D008085 3.0e-37 158.3 95 83.2
ECA247G3538 Erigeron canadensis HOM05D001654 ORTHO05D008085 3.9e-37 157.9 95 81.1
FAN19G0421 Fragaria x ananassa HOM05D001654 ORTHO05D008085 3.9e-37 157.9 95 82.1
Gohir.A12G123100 Gossypium hirsutum HOM05D001654 ORTHO05D008085 3.9e-37 157.9 95 80.0
Gorai.008G137600 Gossypium raimondii HOM05D001654 ORTHO05D008085 3.9e-37 157.9 95 80.0
Medtr7g109850 Medicago truncatula HOM05D001654 ORTHO05D008085 3.9e-37 157.9 98 80.6
Sed0023884 Sechium edule HOM05D001654 ORTHO05D008085 3.9e-37 157.9 97 79.4
Thecc.01G318700 Theobroma cacao HOM05D001654 ORTHO05D008085 3.9e-37 157.9 95 80.0
Peaxi162Scf00770g00013 Petunia axillaris HOM05D001654 ORTHO05D008085 5.1e-37 157.5 95 83.2
vmacro15099 Vaccinium macrocarpon HOM05D001654 ORTHO05D008085 5.1e-37 157.5 95 83.2
Ca_09225_v3 Cicer arietinum L. HOM05D001654 ORTHO05D008085 6.6e-37 157.1 98 80.6
Gohir.D12G126700 Gossypium hirsutum HOM05D001654 ORTHO05D008085 8.7e-37 156.8 95 78.9
HPP92_001223 Vanilla planifolia HOM05D000443 ORTHO05D008085 8.7e-37 156.8 97 79.4
EL10As5g23607 Beta vulgaris HOM05D001654 ORTHO05D008085 1.5e-36 156.0 97 74.2
SalBow3G3994 Salvia bowleyana HOM05D001654 ORTHO05D008085 1.5e-36 156.0 92 80.4
VMungo1383G1372 Vigna mungo HOM05D001654 ORTHO05D008085 1.5e-36 156.0 97 78.4
Glyma.19G218400 Glycine max HOM05D001654 ORTHO05D008085 1.9e-36 155.6 96 79.2
MD09G1286600 Malus domestica HOM05D001654 ORTHO05D008085 1.9e-36 155.6 95 82.1
Cpa.g.sc18.98 Carica papaya HOM05D001654 ORTHO05D008085 4.3e-36 154.5 92 81.5
SGA_v2.0_scaffold80G25718 Striga asiatica HOM05D001654 ORTHO05D008085 5.6e-36 154.1 96 81.2
Cc01_g21660 Coffea canephora HOM05D001654 ORTHO05D008085 7.3e-36 153.7 95 76.8
Eucgr.H00910 Eucalyptus grandis HOM05D001654 ORTHO05D008085 7.3e-36 153.7 95 78.9
Oeu038049.1 Olea europaea HOM05D001654 ORTHO05D008085 7.3e-36 153.7 97 76.3
Potri.002G192200 Populus trichocarpa HOM05D001654 ORTHO05D008085 7.3e-36 153.7 94 80.9
Phvul.001G214800 Phaseolus vulgaris HOM05D001654 ORTHO05D008085 9.6e-36 153.3 97 78.4
arahy.Tifrunner.gnm1.ann1.ZIY6TR Arachis hypogaea HOM05D001654 ORTHO05D008085 1.3e-35 152.9 94 74.5
COL.COLO4_23188 Corchorus olitorius HOM05D001654 ORTHO05D008085 1.3e-35 152.9 97 75.3
Migut.D00055 Erythranthe guttata HOM05D001654 ORTHO05D008085 1.3e-35 152.9 95 77.9
Potri.014G117700 Populus trichocarpa HOM05D001654 ORTHO05D008085 1.3e-35 152.9 94 81.9
Sabra14G0087300 Salix brachista HOM05D001654 ORTHO05D008085 1.3e-35 152.9 94 79.8
arahy.Tifrunner.gnm1.ann1.T1V4H7 Arachis hypogaea HOM05D001654 ORTHO05D008085 2.1e-35 152.1 94 74.5
BcaC01g06789 Brassica carinata HOM05D001654 ORTHO05D008085 2.8e-35 151.8 97 78.4
C03p38270 Brassica napus HOM05D001654 ORTHO05D008085 2.8e-35 151.8 97 78.4
BolC3t16108H Brassica oleracea HOM05D001654 ORTHO05D008085 2.8e-35 151.8 97 78.4
Aa31LG5G1590 Aethionema arabicum HOM05D001654 ORTHO05D008085 6.2e-35 150.6 97 77.3
HanXRQChr10g0284781 Helianthus annuus HOM05D001654 ORTHO05D008085 6.2e-35 150.6 95 76.8
Oeu008489.1 Olea europaea HOM05D001654 ORTHO05D008085 6.2e-35 150.6 97 74.2
BcaB01g02401 Brassica carinata HOM05D001654 ORTHO05D008085 8.1e-35 150.2 97 77.3
BraA03t12316Z Brassica rapa HOM05D001654 ORTHO05D008085 8.1e-35 150.2 97 77.3
CDE11G0536 Ceratophyllum demersum HOM05D001654 ORTHO05D008085 8.1e-35 150.2 94 77.7
AL6G51350 Arabidopsis lyrata HOM05D001654 ORTHO05D008085 1.1e-34 149.8 97 76.3
Carub.0006s3529 Capsella rubella HOM05D001654 ORTHO05D008085 1.1e-34 149.8 97 76.3
AT4G01940 Arabidopsis thaliana HOM05D001654 ORTHO05D008085 1.4e-34 149.4 97 76.3
AUR62024601 Chenopodium quinoa HOM05D001654 ORTHO05D008085 1.4e-34 149.4 97 72.2
Os03g0314700 Oryza sativa ssp. japonica HOM05D001654 ORTHO05D008085 1.4e-34 149.4 96 77.1
A03p31360 Brassica napus HOM05D001654 ORTHO05D008085 1.8e-34 149.1 97 77.3
Zm00001eb015070 Zea mays HOM05D001654 ORTHO05D008085 1.8e-34 149.1 97 76.3
CARHR249740 Cardamine hirsuta HOM05D001654 ORTHO05D008085 3.1e-34 148.3 97 75.3
AUR62011756 Chenopodium quinoa HOM05D001654 ORTHO05D008085 3.1e-34 148.3 97 71.1
unitig_62.g23905 Utricularia gibba HOM05D001654 ORTHO05D008085 5.3e-34 147.5 92 78.3
Thhalv10028839m.g Eutrema salsugineum HOM05D001654 ORTHO05D008085 6.9e-34 147.1 97 74.2
Sp6g01820 Schrenkiella parvula HOM05D001654 ORTHO05D008085 6.9e-34 147.1 97 75.3
Lsat_1_v5_gn_8_76661 Lactuca sativa HOM05D001654 ORTHO05D008085 9.0e-34 146.7 97 76.3
THA.LOC104801311 Tarenaya hassleriana HOM05D001654 ORTHO05D008085 1.5e-33 146.0 98 75.5
ATR0693G051 Amborella trichopoda HOM05D001654 ORTHO05D008085 3.4e-33 144.8 97 76.3
Sc04g0010540 Simmondsia chinensis HOM05D001654 ORTHO05D008085 4.9e-32 141.0 95 70.5
SEGI_41551 Sequoiadendron giganteum HOM05D001654 ORTHO05D008085 1.9e-28 129.0 93 68.8
AagrBONN_evm.TU.Sc2ySwM_344.4644 Anthoceros agrestis HOM05D001654 ORTHO05D008085 2.0e-25 119.0 95 63.2
Pp3c2_23200 Physcomitrium patens HOM05D001654 ORTHO05D008085 1.6e-22 109.4 97 57.7
Mapoly0190s0016 Marchantia polymorpha HOM05D001654 ORTHO05D008085 4.6e-22 107.8 94 59.6
CBR_g4584 Chara braunii HOM05D001654 ORTHO05D008085 9.6e-20 100.1 94 54.3
SMO144G0019 Selaginella moellendorffii HOM05D001654 ORTHO05D008085 1.5e-17 92.8 95 50.5
SMO118G0472 Selaginella moellendorffii HOM05D001654 ORTHO05D008085 2.6e-17 92.0 91 49.5
Solyc01g079220.4 Solanum lycopersicum HOM05D001654 ORTHO05D008085 5.5e-15 84.3 49 83.7
Cre17.g710800 Chlamydomonas reinhardtii HOM05D001654 ORTHO05D008085 3.5e-14 81.6 86 46.5
PRCOL_00005187 Prasinoderma coloniale HOM05D001654 ORTHO05D008085 7.4e-12 73.9 103 38.8
RcHm_v2.0_Chr1g0346861 Rosa chinensis HOM05D001654 ORTHO05D008085 2.9e-08 62.0 39 76.9
Hma1.2p1_0965F.1_g242110 Hydrangea macrophylla HOM05D001654 ORTHO05D008085 6.5e-08 60.8 34 85.3
RcHm_v2.0_Chr4g0387891 Rosa chinensis HOM05D001654 ORTHO05D008085 1.9e-07 59.3 39 74.4
RcHm_v2.0_Chr2g0124791 Rosa chinensis HOM05D000129 ORTHO05D020242 2.1e-06 55.8 36 75.0
RcHm_v2.0_Chr2g0133041 Rosa chinensis HOM05D000129 ORTHO05D020242 2.1e-06 55.8 36 75.0


User provided reference genes

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