Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 6.6e-279 963.4 483 100.0
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 1.1e-217 760.0 483 80.3
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 9.4e-217 756.9 481 79.6
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 2.7e-216 755.4 487 79.5
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 4.7e-216 754.6 484 81.0
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 1.4e-215 753.1 483 79.9
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 4.0e-215 751.5 484 78.9
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 2.0e-214 749.2 487 80.5
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 2.6e-214 748.8 484 78.5
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 4.4e-214 748.0 484 79.5
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 4.4e-214 748.0 486 79.2
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 4.4e-214 748.0 484 78.5
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 7.5e-214 747.3 483 78.7
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 1.1e-212 743.4 452 83.0
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 4.1e-212 741.5 483 77.4
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 7.0e-212 740.7 483 77.4
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 1.2e-211 740.0 477 79.2
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 1.6e-211 739.6 487 78.0
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 1.6e-211 739.6 477 79.2
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 4.5e-211 738.0 452 82.1
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 5.9e-211 737.6 475 79.6
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 5.9e-211 737.6 484 78.5
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 7.7e-211 737.3 484 77.5
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 1.7e-210 736.1 484 77.1
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 5.0e-210 734.6 491 77.8
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 8.6e-210 733.8 475 78.7
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 2.5e-209 732.3 477 77.1
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 5.5e-209 731.1 482 77.0
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 9.5e-209 730.3 502 75.9
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 1.6e-208 729.6 484 77.3
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 2.1e-208 729.2 463 80.8
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 2.8e-208 728.8 483 76.6
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 3.6e-208 728.4 484 77.7
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 4.7e-208 728.0 452 81.4
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 6.1e-208 727.6 483 77.6
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 1.4e-207 726.5 476 78.2
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 1.4e-207 726.5 483 76.6
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.8e-207 726.1 485 78.1
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 2.3e-207 725.7 453 80.8
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 3.0e-207 725.3 485 77.9
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 3.0e-207 725.3 485 77.9
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 4.0e-207 724.9 453 80.8
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 5.2e-207 724.5 478 78.0
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 8.9e-207 723.8 480 78.8
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 5.7e-206 721.1 465 78.9
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 7.5e-206 720.7 484 77.1
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 7.5e-206 720.7 466 79.6
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 9.8e-206 720.3 488 77.0
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 9.8e-206 720.3 477 77.8
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 3.7e-205 718.4 483 75.6
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 3.7e-205 718.4 453 80.8
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 8.3e-205 717.2 463 79.0
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 8.3e-205 717.2 465 78.3
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 8.3e-205 717.2 483 77.0
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 1.1e-204 716.8 487 74.9
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 1.4e-204 716.5 477 76.3
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 1.4e-204 716.5 465 77.8
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 2.4e-204 715.7 440 81.1
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 3.1e-204 715.3 488 74.6
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 5.4e-204 714.5 434 81.8
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 5.4e-204 714.5 483 74.5
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.6e-203 713.0 483 74.3
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 3.5e-203 711.8 483 74.3
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.7e-202 709.5 463 77.5
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 2.3e-202 709.1 451 79.6
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 3.8e-202 708.4 431 81.7
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 3.8e-202 708.4 451 79.6
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 6.6e-202 707.6 438 80.6
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 8.6e-202 707.2 483 75.4
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 1.1e-201 706.8 451 79.4
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.1e-201 706.8 472 76.3
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.1e-201 706.8 483 73.9
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.9e-201 706.1 463 78.2
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.9e-201 706.1 483 73.9
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 3.3e-201 705.3 453 78.1
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 5.6e-201 704.5 451 78.9
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 5.6e-201 704.5 482 75.5
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 7.3e-201 704.1 420 84.5
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 7.3e-201 704.1 420 84.5
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 9.5e-201 703.7 503 74.0
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 9.5e-201 703.7 451 78.5
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 1.6e-200 703.0 451 78.3
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 1.6e-200 703.0 451 78.3
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 2.1e-200 702.6 450 78.9
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 3.6e-200 701.8 451 78.3
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 3.6e-200 701.8 451 78.3
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 1.4e-199 699.9 476 74.6
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 8.9e-199 697.2 480 74.8
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 3.4e-198 695.3 441 78.9
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 4.4e-198 694.9 476 74.4
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 4.4e-198 694.9 476 74.4
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 4.4e-198 694.9 476 74.4
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 4.4e-198 694.9 531 68.7
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 1.7e-197 693.0 440 78.0
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 2.2e-197 692.6 412 84.2
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 2.9e-197 692.2 483 73.7
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 1.8e-196 689.5 443 78.1
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 3.2e-196 688.7 440 77.3
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 1.1e-193 680.2 459 76.0
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 3.4e-190 668.7 405 83.0
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 6.4e-189 664.5 483 72.3
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 2.4e-188 662.5 405 82.0
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 1.6e-187 659.8 485 69.9
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 2.3e-183 646.0 476 70.6
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 3.4e-182 642.1 483 69.4
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 1.7e-181 639.8 403 79.4
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 5.1e-178 628.2 532 64.1
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 7.3e-177 624.4 452 71.5
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 7.3e-177 624.4 483 68.9
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 7.3e-177 624.4 435 73.3
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 6.2e-176 621.3 474 68.1
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 1.1e-175 620.5 451 71.8
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 6.0e-171 604.7 465 67.3
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 7.8e-171 604.4 434 71.9
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 8.7e-170 600.9 485 67.2
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 1.2e-168 597.0 432 69.4
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 2.4e-167 592.8 431 69.8
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 3.4e-166 589.0 512 63.3
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 4.3e-161 572.0 425 71.1
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 5.1e-154 548.5 590 54.9
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 1.0e-141 507.7 448 57.1
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 3.5e-139 499.2 318 79.9
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 7.4e-137 491.5 330 76.1
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 8.8e-130 468.0 449 55.0
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 6.3e-120 435.3 404 56.9
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 9.4e-116 421.4 390 56.7
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 3.5e-110 402.9 276 74.3
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 3.0e-106 389.8 486 46.7
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 6.7e-106 388.7 252 76.6
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 2.2e-101 373.6 463 48.2
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 6.4e-80 302.4 173 89.0
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 1.1e-76 291.6 277 58.1
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 1.2e-75 288.1 427 40.5
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 5.8e-73 279.3 209 71.8
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 1.2e-59 235.0 357 40.6
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 6.8e-58 229.2 136 77.9
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 4.9e-48 196.4 382 36.4
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 4.5e-41 173.3 138 68.1
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 7.9e-30 136.0 83 75.9
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 1.6e-27 128.3 81 84.0
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.2e-25 122.1 93 67.7
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 2.6e-25 120.9 90 68.9
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 1.5e-20 105.1 121 52.9
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 5.7e-20 103.2 66 83.3
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 9.7e-20 102.4 92 62.0
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 1.6e-14 85.1 61 72.1
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 2.1e-14 84.7 59 74.6
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.3e-13 81.3 278 27.0
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 7.7e-09 66.2 50 62.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 1.1e-07 62.4 50 60.0
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 1.1e-07 62.4 50 60.0
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 7.9e-06 56.2 81 44.4


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