Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 2.2e-131 472.2 233 100.0
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 5.4e-85 318.2 248 67.3
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 2.3e-83 312.8 222 70.7
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 1.1e-82 310.5 196 79.1
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.1e-82 310.5 229 69.4
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 5.6e-82 308.1 230 68.7
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 7.3e-82 307.8 231 68.4
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 1.6e-81 306.6 236 67.8
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 2.8e-81 305.8 230 68.7
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 3.6e-81 305.4 230 68.3
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 6.2e-81 304.7 186 80.6
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 1.4e-80 303.5 218 70.2
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 3.1e-80 302.4 220 70.9
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 4.0e-80 302.0 184 79.9
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 6.8e-80 301.2 188 78.2
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 1.5e-79 300.1 226 70.8
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 1.5e-79 300.1 187 79.1
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 2.0e-79 299.7 236 65.3
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 2.0e-79 299.7 199 75.4
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 2.6e-79 299.3 190 78.9
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 4.4e-79 298.5 187 78.6
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 5.8e-79 298.1 225 69.8
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 1.3e-78 297.0 204 71.6
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 1.3e-78 297.0 204 71.6
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 3.8e-78 295.4 223 68.2
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 3.8e-78 295.4 232 66.4
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 4.9e-78 295.0 190 76.8
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 6.4e-78 294.7 190 76.8
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 6.4e-78 294.7 227 65.2
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 8.4e-78 294.3 217 70.0
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.1e-77 293.9 190 76.8
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 1.1e-77 293.9 230 65.7
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 1.9e-77 293.1 202 73.8
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 2.4e-77 292.7 204 73.0
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 3.2e-77 292.4 231 65.4
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 3.2e-77 292.4 190 76.3
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 3.2e-77 292.4 218 69.7
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 4.1e-77 292.0 232 64.7
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 4.1e-77 292.0 253 60.9
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 7.1e-77 291.2 238 63.0
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 7.1e-77 291.2 202 72.8
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 9.2e-77 290.8 206 68.9
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 9.2e-77 290.8 201 74.1
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 9.2e-77 290.8 201 73.6
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 9.2e-77 290.8 223 68.2
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 1.2e-76 290.4 198 74.2
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.2e-76 290.4 198 74.2
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 1.2e-76 290.4 200 72.0
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 1.6e-76 290.0 201 71.6
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 1.6e-76 290.0 201 71.6
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 1.6e-76 290.0 188 76.6
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 2.7e-76 289.3 238 63.4
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 2.7e-76 289.3 188 75.5
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 3.5e-76 288.9 229 64.6
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 3.5e-76 288.9 229 64.6
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 3.5e-76 288.9 229 64.6
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 3.5e-76 288.9 200 73.0
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 4.6e-76 288.5 190 76.3
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 6.0e-76 288.1 231 64.1
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 3.0e-75 285.8 200 72.5
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 3.0e-75 285.8 203 70.9
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 3.9e-75 285.4 216 67.6
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 3.9e-75 285.4 218 65.1
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 5.1e-75 285.0 225 64.9
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 5.1e-75 285.0 189 75.7
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 5.1e-75 285.0 189 75.7
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 6.6e-75 284.6 188 77.7
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 8.6e-75 284.3 226 65.9
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 8.6e-75 284.3 201 69.7
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.1e-74 283.9 214 68.2
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.5e-74 283.5 191 74.3
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.9e-74 283.1 208 70.7
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 1.9e-74 283.1 191 74.9
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 4.3e-74 282.0 191 73.3
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 4.3e-74 282.0 229 65.5
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 7.3e-74 281.2 237 63.7
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 7.3e-74 281.2 229 63.3
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 7.3e-74 281.2 251 61.0
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.6e-73 280.0 230 63.9
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 1.6e-73 280.0 191 72.8
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.6e-73 280.0 192 74.5
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 2.1e-73 279.6 190 73.7
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 2.1e-73 279.6 256 60.5
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 3.6e-73 278.9 270 58.9
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 3.6e-73 278.9 209 67.5
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 1.4e-72 276.9 199 69.8
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 1.8e-72 276.6 187 74.3
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 2.4e-72 276.2 249 62.2
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 2.4e-72 276.2 200 69.5
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 5.2e-72 275.0 223 63.7
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 2.6e-71 272.7 225 62.2
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 2.9e-70 269.2 173 76.9
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 6.4e-70 268.1 188 70.7
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 8.4e-70 267.7 212 65.6
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 8.4e-70 267.7 234 61.5
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.9e-69 266.5 173 75.7
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 2.4e-69 266.2 218 66.1
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 1.7e-67 260.0 212 63.7
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.9e-66 256.5 218 61.9
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 3.3e-66 255.8 137 86.9
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 4.0e-64 248.8 251 53.8
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 1.5e-63 246.9 184 67.9
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 7.6e-63 244.6 190 64.7
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 1.7e-62 243.4 191 64.4
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 1.7e-54 216.9 122 84.4
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 1.2e-47 194.1 137 67.9
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 2.0e-47 193.4 171 56.1
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 1.2e-44 184.1 135 67.4
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 1.8e-43 180.3 176 52.8
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 1.8e-40 170.2 174 54.0
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 2.9e-38 162.9 145 62.1
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.2e-36 157.5 122 59.0
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 8.2e-33 144.8 105 70.5
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.6e-31 139.8 104 69.2
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 2.6e-31 139.8 180 45.6
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.7e-30 137.1 71 88.7
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 1.2e-28 131.0 174 46.6
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 3.1e-24 116.3 61 85.2
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.0e-19 101.3 83 68.7
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 1.2e-15 87.8 56 71.4
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 1.6e-15 87.4 50 76.0
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 1.1e-13 81.3 102 50.0
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 2.3e-11 73.6 78 55.1
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 3.0e-11 73.2 89 47.2
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 6.7e-11 72.0 108 41.7
DCAR_015753 Daucus carota HOM05D005192 ORTHO05D006023 7.5e-10 68.6 88 45.5
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 2.8e-09 66.6 63 58.7
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 4.5e-07 59.3 47 66.0
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.0e-06 58.2 39 76.9


User provided reference genes

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