Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 0.0e+00 1814.3 963 100.0
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.6e-287 993.0 891 58.9
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 3.8e-286 988.4 882 59.6
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 8.0e-284 980.7 877 59.5
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 5.7e-282 974.5 886 57.3
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 4.5e-279 964.9 885 57.1
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 7.5e-274 947.6 928 55.7
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 6.4e-273 944.5 880 56.6
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 2.5e-269 932.6 898 56.9
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 3.3e-269 932.2 768 62.9
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 1.3e-262 910.2 890 55.3
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 8.6e-262 907.5 888 53.5
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 1.2e-258 897.1 908 55.6
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 4.9e-257 891.7 881 54.3
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 6.4e-257 891.3 887 53.4
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 8.3e-257 891.0 894 54.6
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 1.4e-256 890.2 888 53.5
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 6.0e-255 884.8 900 53.1
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 1.0e-254 884.0 892 53.5
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 1.7e-254 883.2 887 53.3
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 4.3e-253 878.6 887 53.0
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 1.2e-252 877.1 838 56.7
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 1.4e-251 873.6 889 53.0
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 6.8e-251 871.3 895 53.0
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 1.7e-249 866.7 885 52.9
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 1.1e-248 864.0 891 52.5
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 1.0e-246 857.4 888 51.7
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 1.1e-245 854.0 879 53.7
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 9.6e-245 850.9 884 51.9
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 1.6e-244 850.1 950 49.6
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 1.2e-242 844.0 858 54.5
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 3.4e-242 842.4 874 51.3
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 3.4e-242 842.4 895 52.2
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 7.6e-242 841.3 880 53.1
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 1.9e-240 836.6 890 51.2
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 1.0e-238 830.9 924 50.8
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 6.6e-238 828.2 890 51.0
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 1.9e-237 826.6 890 51.2
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 7.3e-237 824.7 893 50.1
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 3.1e-235 819.3 897 50.8
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 3.8e-233 812.4 895 50.5
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 3.8e-233 812.4 907 49.3
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 5.4e-232 808.5 914 48.6
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.9e-229 800.0 885 50.6
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 4.3e-229 798.9 891 48.3
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 1.3e-228 797.3 886 49.2
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.3e-228 797.3 886 49.2
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 4.8e-228 795.4 886 50.1
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 5.8e-226 788.5 890 48.9
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 1.1e-224 784.3 881 49.5
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 3.2e-224 782.7 889 49.6
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 1.6e-223 780.4 858 51.3
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 2.7e-223 779.6 857 50.1
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 1.0e-222 777.7 882 49.3
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 1.8e-222 776.9 891 49.4
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 5.1e-222 775.4 857 49.0
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 8.7e-222 774.6 884 48.8
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 1.6e-220 770.4 881 49.1
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.8e-220 769.6 895 49.8
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 4.8e-220 768.8 857 49.4
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 1.3e-217 760.8 831 50.9
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 5.5e-216 755.4 886 49.0
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 1.6e-215 753.8 958 48.4
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 4.6e-215 752.3 857 48.9
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 1.8e-214 750.4 875 47.8
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 9.0e-211 738.0 779 52.4
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 2.7e-207 726.5 884 47.9
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.3e-201 707.6 1345 36.4
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 1.8e-195 687.2 880 45.8
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 2.2e-193 680.2 759 52.6
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.9e-193 679.9 846 46.0
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 5.5e-192 675.6 861 43.2
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 1.2e-191 674.5 867 45.8
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 3.6e-191 672.9 900 43.3
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 3.0e-190 669.8 884 45.1
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.1e-189 667.9 853 45.1
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.2e-186 657.9 889 45.3
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 8.5e-185 651.7 851 45.1
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.5e-181 641.0 875 44.6
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.8e-179 634.0 875 44.2
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 1.6e-178 630.9 869 44.2
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 8.0e-175 618.6 875 43.3
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 3.4e-173 613.2 673 50.2
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 3.4e-173 613.2 876 43.3
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.5e-170 603.2 865 42.9
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 3.0e-166 590.1 873 42.4
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 1.2e-165 588.2 824 41.7
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 2.9e-164 583.6 875 42.4
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 4.9e-164 582.8 864 39.6
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 2.4e-163 580.5 861 41.0
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.4e-163 580.5 514 58.8
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 1.2e-162 578.2 855 41.4
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 1.6e-162 577.8 868 41.5
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 2.0e-162 577.4 868 41.5
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 3.5e-162 576.6 862 39.4
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 1.3e-161 574.7 863 41.0
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 1.9e-160 570.9 1377 31.2
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 3.3e-160 570.1 880 40.5
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 2.1e-159 567.4 457 62.4
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 3.6e-159 566.6 869 40.9
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 3.6e-159 566.6 866 41.7
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 3.6e-159 566.6 729 42.2
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 4.7e-159 566.2 869 40.9
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 6.2e-159 565.8 889 39.3
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 6.2e-159 565.8 869 40.9
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 1.0e-158 565.1 849 40.6
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 2.2e-156 557.4 410 67.8
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 1.7e-153 547.7 568 53.2
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 1.6e-151 541.2 927 37.9
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 3.6e-151 540.0 863 39.4
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 1.3e-148 531.6 877 38.2
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 2.9e-140 503.8 922 36.7
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 6.4e-140 502.7 876 38.2
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 1.5e-133 481.5 882 35.5
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 3.0e-129 467.2 313 72.8
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 4.2e-123 446.8 325 67.7
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 3.1e-110 404.1 361 56.5
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 1.9e-107 394.8 413 50.1
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 5.5e-107 393.3 310 63.9
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 8.7e-105 386.0 657 37.7
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 6.5e-100 369.8 434 48.2
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 1.1e-83 315.8 262 58.8
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 3.2e-83 314.3 797 29.7
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 1.5e-80 305.4 811 32.2
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 9.7e-80 302.8 1065 24.7
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 1.5e-75 288.9 368 44.8
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 9.1e-70 269.6 600 33.7
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 2.7e-69 268.1 188 67.6
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 1.0e-68 266.2 417 37.9
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 8.5e-68 263.1 360 42.5
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 2.5e-67 261.5 396 39.4
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 6.1e-66 256.9 389 42.2
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 3.7e-63 247.7 412 38.8
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.3e-57 228.4 428 33.2
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 3.0e-57 228.0 173 64.7
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 6.8e-57 226.9 488 33.4
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.2e-56 226.1 261 47.5
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 1.2e-56 226.1 288 48.6
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 6.6e-52 210.3 471 34.6
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.4e-49 202.6 247 47.8
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 1.5e-48 199.1 401 35.2
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 1.1e-46 193.0 298 39.6
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 9.5e-43 179.9 222 44.1
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 4.7e-42 177.6 146 61.0
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 2.6e-40 171.8 137 62.0
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 3.1e-33 148.3 119 61.3
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 2.2e-31 142.1 198 42.4
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 3.7e-31 141.4 361 28.8
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.1e-30 139.8 105 64.8
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 2.4e-30 138.7 98 67.3
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 7.8e-29 133.7 209 43.1
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 1.7e-28 132.5 80 77.5
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 1.5e-27 129.4 314 28.3
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 2.1e-26 125.6 84 67.9
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 4.7e-26 124.4 81 69.1
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 6.8e-25 120.6 81 69.1
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 6.8e-25 120.6 189 37.6
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 4.1e-22 111.3 251 30.3
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.0e-20 106.7 178 37.6
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 5.6e-19 100.9 129 47.3
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 9.6e-19 100.1 120 41.7
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 3.1e-17 95.1 134 42.5
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 4.0e-17 94.7 206 35.4
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 4.4e-16 91.3 133 40.6
FAN20G1461 Fragaria x ananassa HOM05D003469 ORTHO05D004084 9.9e-16 90.1 122 43.4
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 1.9e-14 85.9 129 41.1
AagrBONN_evm.TU.Sc2ySwM_362.2853 Anthoceros agrestis HOM05D003469 ORTHO05D004084 9.3e-14 83.6 118 41.5
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 1.2e-13 83.2 104 40.4
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 1.6e-13 82.8 129 38.0
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 1.6e-13 82.8 204 32.4
Lj9A422T78 Lonicera japonica HOM05D003469 ORTHO05D029064 2.1e-13 82.4 85 50.6
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 2.1e-13 82.4 91 47.3
Lsat_1_v5_gn_6_14080 Lactuca sativa HOM05D002718 ORTHO05D004084 2.1e-10 72.4 57 61.4
Ca_19033_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 8.1e-10 70.5 56 58.9
Psat0s2166g0160 Pisum sativum HOM05D003469 ORTHO05D004084 4.0e-09 68.2 83 44.6
QL01p054481 Quercus lobata HOM05D003469 ORTHO05D004084 4.0e-09 68.2 48 66.7
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 5.3e-09 67.8 61 52.5
Actinidia02458 Actinidia chinensis HOM05D003469 ORTHO05D004084 2.6e-08 65.5 68 55.9
Aa31LG2G17590 Aethionema arabicum HOM05D003469 ORTHO05D004084 7.6e-08 63.9 56 48.2
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 1.3e-07 63.2 129 31.0
Sp4g05220 Schrenkiella parvula HOM05D003469 ORTHO05D004084 2.4e-06 58.9 46 63.0
Cc00_g33310 Coffea canephora HOM05D003469 ORTHO05D029064 3.2e-06 58.5 45 60.0


User provided reference genes

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