Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001432 Daucus carota HOM05D004216 ORTHO05D004926 0.0e+00 2611.3 1375 100.0
Dinv38590 Davidia involucrata HOM05D004216 ORTHO05D004926 0.0e+00 1572.8 1281 65.3
Hma1.2p1_0595F.1_g186000 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 0.0e+00 1538.9 1280 64.1
CSS0006085 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 0.0e+00 1533.9 1326 61.7
CSS0012337 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 0.0e+00 1533.9 1326 61.7
Nitab4.5_0001599g0210 Nicotiana tabacum HOM05D004216 ORTHO05D004926 0.0e+00 1493.8 1367 59.0
Cc04_g07550 Coffea canephora HOM05D004216 ORTHO05D004926 0.0e+00 1488.8 1279 62.2
CAN.G438.113 Capsicum annuum HOM05D004216 ORTHO05D004926 0.0e+00 1488.0 1357 59.4
Nitab4.5_0000410g0130 Nicotiana tabacum HOM05D004216 ORTHO05D004926 0.0e+00 1478.8 1316 59.7
Sopen03g038630 Solanum pennellii HOM05D004216 ORTHO05D004926 0.0e+00 1454.1 1354 58.5
HanXRQChr05g0153841 Helianthus annuus HOM05D004216 ORTHO05D004926 0.0e+00 1446.0 1287 59.2
Oeu004769.3 Olea europaea HOM05D004216 ORTHO05D004926 0.0e+00 1430.6 1316 57.7
Lsat_1_v5_gn_5_25060 Lactuca sativa HOM05D004216 ORTHO05D004926 0.0e+00 1417.9 1302 58.4
Migut.J01004 Erythranthe guttata HOM05D004216 ORTHO05D004926 0.0e+00 1411.4 1321 58.5
Nn4g23713 Nelumbo nucifera HOM05D004216 ORTHO05D004926 0.0e+00 1408.3 1290 59.0
QL10p022943 Quercus lobata HOM05D004216 ORTHO05D004926 0.0e+00 1401.7 1299 57.0
RcHm_v2.0_Chr7g0184581 Rosa chinensis HOM05D004216 ORTHO05D004926 0.0e+00 1400.2 1354 56.2
Cfa019828 Carpinus fangiana HOM05D004216 ORTHO05D004926 0.0e+00 1399.8 1292 57.6
CiPaw.15G126300 Carya illinoinensis HOM05D004216 ORTHO05D004926 0.0e+00 1396.3 1289 57.6
Actinidia31032 Actinidia chinensis HOM05D004216 ORTHO05D004926 0.0e+00 1394.8 1275 60.2
Peaxi162Scf00015g00072 Petunia axillaris HOM05D004216 ORTHO05D004926 0.0e+00 1393.3 1486 54.4
SalBow3G4568 Salvia bowleyana HOM05D004216 ORTHO05D004926 0.0e+00 1390.2 1319 56.2
FAN18G1390 Fragaria x ananassa HOM05D004216 ORTHO05D004926 0.0e+00 1378.6 1352 55.8
FAN13G0239 Fragaria x ananassa HOM05D004216 ORTHO05D004926 0.0e+00 1375.5 1347 55.6
TWI81G0292 Tripterygium wilfordii HOM05D004216 ORTHO05D004926 0.0e+00 1375.1 1296 57.0
FvH4_5g12730 Fragaria vesca HOM05D004216 ORTHO05D004926 0.0e+00 1374.4 1347 55.7
Ciclev10018514m.g Citrus clementina HOM05D004216 ORTHO05D004926 0.0e+00 1372.8 1295 57.1
Manes.05G119100 Manihot esculenta HOM05D004216 ORTHO05D004926 0.0e+00 1370.9 1296 57.4
FAN08G0408 Fragaria x ananassa HOM05D004216 ORTHO05D004926 0.0e+00 1368.6 1348 55.4
Thecc.03G027900 Theobroma cacao HOM05D004216 ORTHO05D004926 0.0e+00 1368.6 1295 57.7
Potri.015G050800 Populus trichocarpa HOM05D004216 ORTHO05D004926 0.0e+00 1360.5 1300 56.7
Eucgr.K02653 Eucalyptus grandis HOM05D004216 ORTHO05D004926 0.0e+00 1357.4 1282 56.3
Solyc03g119780.4 Solanum lycopersicum HOM05D004216 ORTHO05D004926 0.0e+00 1357.4 1012 67.4
Aqoxy3G03901 Aquilegia oxysepala HOM05D004216 ORTHO05D004926 0.0e+00 1352.4 1278 57.0
MSTRG.5865 Avicennia marina HOM05D004216 ORTHO05D004926 0.0e+00 1350.9 1284 56.3
ClCG04G011280 Citrullus lanatus HOM05D004216 ORTHO05D004926 0.0e+00 1350.1 1243 57.3
VMungo1215G1362 Vigna mungo HOM05D004216 ORTHO05D004926 0.0e+00 1350.1 1302 56.4
Glyma.17G121600 Glycine max HOM05D004216 ORTHO05D004926 0.0e+00 1342.8 1302 55.9
Lj4g0001448 Lotus japonicus HOM05D004216 ORTHO05D004926 0.0e+00 1340.5 1303 56.6
FAN18G2177 Fragaria x ananassa HOM05D004216 ORTHO05D004926 0.0e+00 1338.6 1352 54.8
Ca_02536_v3 Cicer arietinum L. HOM05D004216 ORTHO05D004926 0.0e+00 1337.8 1302 55.9
arahy.Tifrunner.gnm1.ann1.CB5LZE Arachis hypogaea HOM05D004216 ORTHO05D004926 0.0e+00 1337.4 1325 55.6
MELO3C002074.2 Cucumis melo HOM05D004216 ORTHO05D004926 0.0e+00 1336.6 1267 55.9
PGR044G2306 Punica granatum HOM05D004216 ORTHO05D004926 0.0e+00 1335.9 1235 58.0
Atru.chr9.749 Acer truncatum HOM05D004216 ORTHO05D004926 0.0e+00 1334.7 1339 55.6
Gorai.001G045800 Gossypium raimondii HOM05D004216 ORTHO05D004926 0.0e+00 1333.5 1285 56.7
arahy.Tifrunner.gnm1.ann1.868KN4 Arachis hypogaea HOM05D004216 ORTHO05D004926 0.0e+00 1332.8 1315 55.7
Lalb_Chr12g0197541 Lupinus albus HOM05D004216 ORTHO05D004926 0.0e+00 1332.8 1272 56.4
Phvul.003G177400 Phaseolus vulgaris HOM05D004216 ORTHO05D004926 0.0e+00 1327.0 1301 55.6
CANSAT80G0956 Cannabis sativa HOM05D004216 ORTHO05D004926 0.0e+00 1317.8 1379 52.2
CsaV3_1G006480 Cucumis sativus L. HOM05D004216 ORTHO05D004926 0.0e+00 1317.8 1267 55.7
PSO017G0533 Papaver somniferum HOM05D004216 ORTHO05D004926 0.0e+00 1317.0 1280 55.7
TPR.G26791 Trifolium pratense HOM05D004216 ORTHO05D004926 0.0e+00 1312.4 1302 55.5
AUR62032188 Chenopodium quinoa HOM05D004216 ORTHO05D004926 0.0e+00 1310.8 1329 53.2
Glyma.05G013400 Glycine max HOM05D004216 ORTHO05D004926 0.0e+00 1310.8 1302 55.1
Hund02527 Selenicereus undatus HOM05D004216 ORTHO05D004926 0.0e+00 1310.0 1313 54.0
PSO478G4514 Papaver somniferum HOM05D004216 ORTHO05D004926 0.0e+00 1308.5 1280 55.4
AUR62036947 Chenopodium quinoa HOM05D004216 ORTHO05D004926 0.0e+00 1298.9 1337 52.7
Sed0006394 Sechium edule HOM05D004216 ORTHO05D004926 0.0e+00 1293.9 1266 54.5
FAN04G0815 Fragaria x ananassa HOM05D004216 ORTHO05D004926 0.0e+00 1292.7 1240 56.0
ECA246G5151 Erigeron canadensis HOM05D004216 ORTHO05D004926 0.0e+00 1283.9 1201 56.9
Sc10g0009590 Simmondsia chinensis HOM05D004216 ORTHO05D004926 0.0e+00 1279.6 1232 55.0
SGA_v2.0_scaffold13G06699 Striga asiatica HOM05D004216 ORTHO05D004926 0.0e+00 1264.2 1279 54.5
GSVIVG01008230001 Vitis vinifera HOM05D004216 ORTHO05D004926 0.0e+00 1256.9 1211 56.1
EL10Ac5g11246 Beta vulgaris HOM05D004216 ORTHO05D004926 0.0e+00 1248.8 1284 52.3
AT1G73960 Arabidopsis thaliana HOM05D004216 ORTHO05D004926 0.0e+00 1235.3 1282 52.9
Thhalv10018013m.g Eutrema salsugineum HOM05D004216 ORTHO05D004926 0.0e+00 1230.3 1282 52.0
Carub.0002s2073 Capsella rubella HOM05D004216 ORTHO05D004926 0.0e+00 1226.8 1291 52.6
Duzib205G0916 Durio zibethinus HOM05D004216 ORTHO05D004926 0.0e+00 1225.3 1275 53.7
CARHR067070 Cardamine hirsuta HOM05D004216 ORTHO05D004926 0.0e+00 1222.2 1240 53.3
AL2G33790 Arabidopsis lyrata HOM05D004216 ORTHO05D004926 0.0e+00 1221.1 1281 52.4
C06p48070 Brassica napus HOM05D004216 ORTHO05D004926 0.0e+00 1210.7 1280 52.0
BolC6t39842H Brassica oleracea HOM05D004216 ORTHO05D004926 0.0e+00 1208.7 1279 52.2
ATR0564G329 Amborella trichopoda HOM05D004216 ORTHO05D004926 0.0e+00 1205.7 1255 52.9
Sp5g29160 Schrenkiella parvula HOM05D004216 ORTHO05D004926 0.0e+00 1203.0 1279 52.2
A07p39800 Brassica napus HOM05D004216 ORTHO05D004926 0.0e+00 1200.3 1281 51.7
THA.LOC104812129 Tarenaya hassleriana HOM05D004216 ORTHO05D004926 0.0e+00 1193.7 1273 52.2
BraA07t31527Z Brassica rapa HOM05D004216 ORTHO05D004926 0.0e+00 1192.6 1293 51.1
unitig_578.g15823 Utricularia gibba HOM05D004216 ORTHO05D004926 0.0e+00 1172.5 1231 53.1
Aa31LG4G4250 Aethionema arabicum HOM05D004216 ORTHO05D004926 0.0e+00 1168.3 1278 50.2
HPP92_023478 Vanilla planifolia HOM05D004216 ORTHO05D004926 0.0e+00 1161.0 1243 49.8
Prupe.5G217000 Prunus persica HOM05D004216 ORTHO05D004926 0.0e+00 1156.7 1159 54.8
Gohir.A07G038666 Gossypium hirsutum HOM05D004216 ORTHO05D004926 0.0e+00 1156.0 1284 51.8
CDE05G2534 Ceratophyllum demersum HOM05D004216 ORTHO05D004926 0.0e+00 1147.1 1005 57.5
Psat4g043600 Pisum sativum HOM05D004216 ORTHO05D004926 0.0e+00 1131.7 1107 55.7
Ah.11g047140 Amaranthus hybridus HOM05D004216 ORTHO05D004926 0.0e+00 1121.7 1288 49.3
TAR371G0728 Trochodendron aralioides HOM05D004216 ORTHO05D004926 4.6e-309 1065.1 998 58.8
Zm00001eb312360 Zea mays HOM05D004216 ORTHO05D004926 1.6e-306 1056.6 1347 45.2
Rhsim08G0138000 Rhododendron simsii HOM05D004216 ORTHO05D004926 2.2e-303 1046.2 840 63.9
MD06G1211000 Malus domestica HOM05D004216 ORTHO05D004926 1.1e-302 1043.9 1125 52.8
Hma1.2p1_0595F.1_g186010 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 5.6e-299 1031.6 748 69.5
Lj9A432G69 Lonicera japonica HOM05D004216 ORTHO05D004926 2.0e-283 979.9 850 62.5
SEGI_21625 Sequoiadendron giganteum HOM05D004216 ORTHO05D004926 6.3e-282 974.9 850 58.4
Gohir.A07G038732 Gossypium hirsutum HOM05D004216 ORTHO05D004926 1.9e-254 883.6 749 60.6
Mapoly0014s0115 Marchantia polymorpha HOM05D004216 ORTHO05D004926 1.4e-252 877.5 995 46.7
Sabra15G0075800 Salix brachista HOM05D004216 ORTHO05D004926 4.1e-249 865.9 847 53.8
Pp3c18_6100 Physcomitrium patens HOM05D004216 ORTHO05D004926 2.7e-248 863.2 1006 47.2
Pp3c21_15920 Physcomitrium patens HOM05D004216 ORTHO05D004926 4.1e-241 839.3 1039 44.9
COL.COLO4_22716 Corchorus olitorius HOM05D004216 ORTHO05D004926 1.1e-212 745.0 815 53.5
SMO367G1244 Selaginella moellendorffii HOM05D004216 ORTHO05D004926 4.0e-212 743.0 1078 41.3
Gohir.D07G042740 Gossypium hirsutum HOM05D004216 ORTHO05D004926 2.2e-194 684.1 673 57.1
Haze_18610 Corylus avellana HOM05D004216 ORTHO05D004926 1.1e-180 638.6 674 53.9
Haze_18611 Corylus avellana HOM05D004216 ORTHO05D004926 1.8e-180 637.9 674 53.7
vmacro17679 Vaccinium macrocarpon HOM05D004216 ORTHO05D004926 1.5e-174 618.2 481 64.7
AagrBONN_evm.TU.Sc2ySwM_117.3880 Anthoceros agrestis HOM05D004216 ORTHO05D004926 1.7e-170 604.7 791 42.7
HPP92_023454 Vanilla planifolia HOM05D004216 ORTHO05D004926 6.5e-162 576.2 710 45.6
Lj9P432G41 Lonicera japonica HOM05D004216 ORTHO05D004926 1.1e-150 538.9 352 75.0
COL.COLO4_22715 Corchorus olitorius HOM05D004216 ORTHO05D004926 8.0e-128 463.0 383 62.7
SEGI_35421 Sequoiadendron giganteum HOM05D004216 ORTHO05D004926 2.2e-117 428.3 388 55.4
Cpa.g.sc13.49 Carica papaya HOM05D004216 ORTHO05D004926 6.6e-114 416.8 508 48.4
Cpa.g.sc1020.1 Carica papaya HOM05D004216 ORTHO05D004926 1.7e-106 392.1 250 72.4
TAR371G0173 Trochodendron aralioides HOM05D004216 ORTHO05D004926 2.6e-102 378.3 274 67.9
vmacro17678 Vaccinium macrocarpon HOM05D004216 ORTHO05D004926 1.2e-94 352.8 513 46.4
Os09g0410125 Oryza sativa ssp. japonica HOM05D004216 ORTHO05D004926 2.0e-94 352.1 283 61.5
Rhsim08G0137900 Rhododendron simsii HOM05D004216 ORTHO05D004926 2.2e-85 322.0 548 42.5
Medtr1014s0010 Medicago truncatula HOM05D004216 ORTHO05D004926 1.2e-83 316.2 206 71.8
Haze_18609 Corylus avellana HOM05D004216 ORTHO05D004926 3.1e-71 275.0 208 64.4
MD06G1210800 Malus domestica HOM05D004216 ORTHO05D004926 1.6e-67 262.7 207 63.3
Gohir.D07G042780 Gossypium hirsutum HOM05D004216 ORTHO05D004926 8.2e-64 250.4 173 72.3
PGSC0003DMG400005622 Solanum tuberosum HOM05D004216 ORTHO05D004926 5.7e-57 227.6 432 40.7
Cfa022283 Carpinus fangiana HOM05D004216 ORTHO05D004926 3.7e-56 224.9 864 23.3
Cpa.g.sc13.56 Carica papaya HOM05D004216 ORTHO05D004926 6.1e-51 207.6 145 70.3
Gohir.D07G042820 Gossypium hirsutum HOM05D004216 ORTHO05D004926 1.5e-49 203.0 235 48.5
Actinidia39807 Actinidia chinensis HOM05D004216 ORTHO05D004926 4.7e-43 181.4 231 46.8
PRCOL_00003918 Prasinoderma coloniale HOM05D004216 ORTHO05D004926 5.7e-41 174.5 729 22.8
Cpa.g.sc13.54 Carica papaya HOM05D004216 ORTHO05D004926 2.4e-39 169.1 104 76.9
Cre13.g583500 Chlamydomonas reinhardtii HOM05D004216 ORTHO05D004926 3.1e-39 168.7 654 24.9
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.2e-38 166.8 353 37.7
SHI18928 Sapria himalayana HOM05D004216 ORTHO05D004926 3.5e-38 165.2 139 57.6
Gohir.D07G042860 Gossypium hirsutum HOM05D004216 ORTHO05D004926 5.9e-38 164.5 155 56.8
Cpa.g.sc1020.2 Carica papaya HOM05D004216 ORTHO05D004926 4.2e-36 158.3 134 61.9
Haze_18607 Corylus avellana HOM05D004216 ORTHO05D004926 1.0e-34 153.7 122 59.0
DCAR_023664 Daucus carota HOM05D000415 ORTHO05D006649 7.0e-31 141.0 116 67.2
TAR629G2837 Trochodendron aralioides HOM05D004216 ORTHO05D004926 1.3e-29 136.7 122 54.9
arahy.Tifrunner.gnm1.ann1.CPL525 Arachis hypogaea HOM05D004216 ORTHO05D004926 2.9e-29 135.6 328 31.7
Lj9A432T73 Lonicera japonica HOM05D004216 ORTHO05D004926 1.2e-27 130.2 89 75.3
Duzib084G0462 Durio zibethinus HOM05D004216 ORTHO05D004926 6.1e-27 127.9 136 50.0
Zm00001eb099360 Zea mays HOM05D004216 ORTHO05D004926 8.0e-27 127.5 103 58.3
SHI18921 Sapria himalayana HOM05D004216 ORTHO05D004926 4.4e-25 121.7 146 50.0
Medtr0268s0020 Medicago truncatula HOM05D004216 ORTHO05D004926 1.7e-24 119.8 76 69.7
arahy.Tifrunner.gnm1.ann1.1842CP Arachis hypogaea HOM05D004216 ORTHO05D004926 2.8e-24 119.0 156 44.9
SalBow8G1216 Salvia bowleyana HOM05D004216 ORTHO05D004926 3.1e-23 115.5 80 65.0
Os09g0409950 Oryza sativa ssp. japonica HOM05D004216 ORTHO05D004926 1.7e-21 109.8 124 46.8
SHI18930 Sapria himalayana HOM05D004216 ORTHO05D004926 2.9e-21 109.0 113 48.7
Lsat_1_v5_gn_3_22081 Lactuca sativa HOM05D001700 ORTHO05D013746 3.8e-21 108.6 73 71.2
arahy.Tifrunner.gnm1.ann1.FN32SY Arachis hypogaea HOM05D004216 ORTHO05D004926 2.8e-19 102.4 75 68.0
arahy.Tifrunner.gnm1.ann1.1HJL67 Arachis hypogaea HOM05D004216 ORTHO05D004926 1.0e-18 100.5 62 72.6
arahy.Tifrunner.gnm1.ann1.269HHI Arachis hypogaea HOM05D004216 ORTHO05D004926 1.8e-18 99.8 123 48.0
Lj6g0001849 Lotus japonicus HOM05D004216 ORTHO05D004926 5.2e-18 98.2 59 74.6
Lsat_1_v5_gn_4_30120 Lactuca sativa HOM05D004216 ORTHO05D004926 4.4e-17 95.1 107 45.8
SHI18919 Sapria himalayana HOM05D004216 ORTHO05D004926 2.4e-15 89.4 146 43.8
SHI18924 Sapria himalayana HOM05D004216 ORTHO05D004926 4.5e-14 85.1 62 66.1
Lsat_1_v5_gn_4_156821 Lactuca sativa HOM05D001700 ORTHO05D013746 1.9e-12 79.7 55 70.9
MD14G1221600 Malus domestica HOM05D004216 ORTHO05D004926 5.6e-12 78.2 46 69.6
Medtr4g113495 Medicago truncatula HOM05D004216 ORTHO05D004926 8.0e-11 74.3 83 48.2
Medtr4g113360 Medicago truncatula HOM05D004216 ORTHO05D004926 8.9e-10 70.9 110 41.8
SHI18929 Sapria himalayana HOM05D004216 ORTHO05D004926 1.5e-09 70.1 69 47.8
MD14G1221500 Malus domestica HOM05D004216 ORTHO05D004926 2.6e-09 69.3 70 52.9
TWI60G0758 Tripterygium wilfordii HOM05D004216 ORTHO05D004926 2.6e-09 69.3 48 70.8
arahy.Tifrunner.gnm1.ann1.9R3CPH Arachis hypogaea HOM05D004216 ORTHO05D004926 3.4e-09 68.9 61 54.1
SHI18927 Sapria himalayana HOM05D004216 ORTHO05D004926 1.1e-07 63.9 40 75.0
Medtr1091s0010 Medicago truncatula HOM05D004216 ORTHO05D004926 3.2e-07 62.4 33 78.8


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