Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_001107 Daucus carota HOM05D000940 ORTHO05D039535 9.9e-59 229.9 119 100.0
DCAR_009085 Daucus carota HOM05D000940 ORTHO05D000782 1.0e-15 87.0 48 87.5
DCAR_020655 Daucus carota HOM05D002156 ORTHO05D002328 1.3e-13 80.1 61 63.9
MSTRG.19358 Avicennia marina HOM05D000940 ORTHO05D000782 7.7e-11 70.9 46 69.6
Cc06_g17380 Coffea canephora HOM05D000940 ORTHO05D000782 2.2e-10 69.3 61 52.5
Oeu043897.1 Olea europaea HOM05D000940 ORTHO05D000782 3.8e-10 68.6 61 50.8
Nn2g14527 Nelumbo nucifera HOM05D000940 ORTHO05D000782 5.0e-10 68.2 46 65.2
Actinidia03931 Actinidia chinensis HOM05D000940 ORTHO05D000782 8.5e-10 67.4 61 52.5
Migut.J00774 Erythranthe guttata HOM05D000940 ORTHO05D000782 8.5e-10 67.4 61 50.8
FvH4_1g28510 Fragaria vesca HOM05D000940 ORTHO05D000782 8.5e-10 67.4 61 50.8
FAN23G0773 Fragaria x ananassa HOM05D000940 ORTHO05D000782 8.5e-10 67.4 61 50.8
Potri.013G064300 Populus trichocarpa HOM05D000940 ORTHO05D000782 8.5e-10 67.4 98 38.8
RcHm_v2.0_Chr3g0496251 Rosa chinensis HOM05D000940 ORTHO05D000782 8.5e-10 67.4 61 50.8
Thecc.05G243700 Theobroma cacao HOM05D000940 ORTHO05D000782 8.5e-10 67.4 61 50.8
FAN26G2940 Fragaria x ananassa HOM05D000940 ORTHO05D000782 1.1e-09 67.0 61 50.8
Lj4C230T15 Lonicera japonica HOM05D000940 ORTHO05D000782 1.1e-09 67.0 61 52.5
Atru.chr2.1487 Acer truncatum HOM05D000940 ORTHO05D000782 1.9e-09 66.2 104 37.5
Gohir.A13G164000 Gossypium hirsutum HOM05D000940 ORTHO05D000782 1.9e-09 66.2 61 49.2
Gohir.D13G166900 Gossypium hirsutum HOM05D000940 ORTHO05D000782 1.9e-09 66.2 61 49.2
Gorai.013G195600 Gossypium raimondii HOM05D000940 ORTHO05D000782 1.9e-09 66.2 61 49.2
Hma1.2p1_1039F.1_g250860 Hydrangea macrophylla HOM05D000940 ORTHO05D000782 1.9e-09 66.2 77 41.6
MD12G1009300 Malus domestica HOM05D000940 ORTHO05D000782 1.9e-09 66.2 104 36.5
Actinidia26589 Actinidia chinensis HOM05D000940 ORTHO05D000782 2.5e-09 65.9 46 65.2
Actinidia37808 Actinidia chinensis HOM05D000940 ORTHO05D000782 2.5e-09 65.9 46 65.2
CSS0020570 Camellia sinensis var. sinensis HOM05D000940 ORTHO05D000782 2.5e-09 65.9 46 60.9
Ciclev10018927m.g Citrus clementina HOM05D000940 ORTHO05D000782 2.5e-09 65.9 61 50.8
MD14G1006700 Malus domestica HOM05D000940 ORTHO05D000782 3.2e-09 65.5 104 36.5
Manes.09G137500 Manihot esculenta HOM05D000940 ORTHO05D000782 3.2e-09 65.5 61 50.8
GSVIVG01029950001 Vitis vinifera HOM05D000940 ORTHO05D000782 4.2e-09 65.1 46 63.0
Lsat_1_v5_gn_6_31581 Lactuca sativa HOM05D000940 ORTHO05D000782 5.5e-09 64.7 55 50.9
QL07p017592 Quercus lobata HOM05D000940 ORTHO05D000782 5.5e-09 64.7 61 47.5
Haze_20437 Corylus avellana HOM05D000940 ORTHO05D000782 7.2e-09 64.3 61 49.2
PGR142G2657 Punica granatum HOM05D000940 ORTHO05D000782 7.2e-09 64.3 62 48.4
Duzib177G0475 Durio zibethinus HOM05D000940 ORTHO05D000782 9.4e-09 63.9 61 47.5
Eucgr.K01521 Eucalyptus grandis HOM05D000940 ORTHO05D000782 9.4e-09 63.9 46 60.9
Potri.019G039000 Populus trichocarpa HOM05D000940 ORTHO05D000782 9.4e-09 63.9 46 63.0
Sabra19G0049900 Salix brachista HOM05D000940 ORTHO05D000782 9.4e-09 63.9 79 41.8
Cpa.g.sc161.23 Carica papaya HOM05D000940 ORTHO05D000782 1.2e-08 63.5 61 49.2
ECA233G3322 Erigeron canadensis HOM05D000940 ORTHO05D000782 1.2e-08 63.5 61 45.9
Aqoxy1G00529 Aquilegia oxysepala HOM05D000940 ORTHO05D000782 1.6e-08 63.2 55 49.1
Rhsim03G0050600 Rhododendron simsii HOM05D000940 ORTHO05D000782 1.6e-08 63.2 61 45.9
Sc07g0007820 Simmondsia chinensis HOM05D000940 ORTHO05D000782 1.6e-08 63.2 55 52.7
THA.LOC104820788 Tarenaya hassleriana HOM05D000940 ORTHO05D000782 1.6e-08 63.2 55 52.7
TWI60G1256 Tripterygium wilfordii HOM05D000940 ORTHO05D000782 1.6e-08 63.2 75 41.3
AL3G13580 Arabidopsis lyrata HOM05D000940 ORTHO05D000782 2.1e-08 62.8 61 47.5
Carub.0003s0293 Capsella rubella HOM05D000940 ORTHO05D000782 2.1e-08 62.8 61 47.5
GSVIVG01034604001 Vitis vinifera HOM05D000940 ORTHO05D000782 2.1e-08 62.8 98 37.8
C05p63210 Brassica napus HOM05D000940 ORTHO05D000782 2.7e-08 62.4 55 52.7
Sabra13G0056300 Salix brachista HOM05D000940 ORTHO05D000782 2.7e-08 62.4 61 47.5
Oeu012384.1 Olea europaea HOM05D000940 ORTHO05D000782 3.6e-08 62.0 46 60.9
TAR623G0746 Trochodendron aralioides HOM05D000940 ORTHO05D000782 3.6e-08 62.0 55 47.3
HPP92_017660 Vanilla planifolia HOM05D000940 ORTHO05D000782 3.6e-08 62.0 46 63.0
Aa31LG5G14270 Aethionema arabicum HOM05D000940 ORTHO05D000782 4.7e-08 61.6 55 50.9
BcaC05g30251 Brassica carinata HOM05D000940 ORTHO05D000782 4.7e-08 61.6 55 50.9
A05p43630 Brassica napus HOM05D000940 ORTHO05D000782 4.7e-08 61.6 55 50.9
BolC5t34983H Brassica oleracea HOM05D000940 ORTHO05D000782 4.7e-08 61.6 55 50.9
BraA05t23101Z Brassica rapa HOM05D000940 ORTHO05D000782 4.7e-08 61.6 55 50.9
Sp3g02740 Schrenkiella parvula HOM05D000940 ORTHO05D000782 4.7e-08 61.6 61 45.9
THA.LOC104802879 Tarenaya hassleriana HOM05D000940 ORTHO05D000782 4.7e-08 61.6 62 45.2
AT3G03770 Arabidopsis thaliana HOM05D000940 ORTHO05D000782 6.1e-08 61.2 61 45.9
A03p33400 Brassica napus HOM05D000940 ORTHO05D000782 6.1e-08 61.2 61 45.9
BolC3t16327H Brassica oleracea HOM05D000940 ORTHO05D000782 6.1e-08 61.2 61 45.9
CARHR077830 Cardamine hirsuta HOM05D000940 ORTHO05D000782 6.1e-08 61.2 61 45.9
CiPaw.09G168500 Carya illinoinensis HOM05D000940 ORTHO05D000782 6.1e-08 61.2 46 60.9
Thhalv10020088m.g Eutrema salsugineum HOM05D000940 ORTHO05D000782 6.1e-08 61.2 61 45.9
COL.COLO4_28625 Corchorus olitorius HOM05D000940 ORTHO05D000782 7.9e-08 60.8 40 67.5
BcaC01g04392 Brassica carinata HOM05D000940 ORTHO05D000782 1.0e-07 60.5 55 49.1
BcaC05g29908 Brassica carinata HOM05D000940 ORTHO05D000782 1.0e-07 60.5 55 49.1
C03p40620 Brassica napus HOM05D000940 ORTHO05D000782 1.0e-07 60.5 55 49.1
HanXRQChr13g0398951 Helianthus annuus HOM05D000940 ORTHO05D000782 1.0e-07 60.5 55 47.3
Prupe.7G011100 Prunus persica HOM05D000940 ORTHO05D000782 1.0e-07 60.5 55 45.5
BraA03t12517Z Brassica rapa HOM05D000940 ORTHO05D000782 1.4e-07 60.1 61 44.3
Nitab4.5_0007830g0010 Nicotiana tabacum HOM05D000940 ORTHO05D000782 1.4e-07 60.1 46 63.0
PSO063G4110 Papaver somniferum HOM05D000940 ORTHO05D000782 1.4e-07 60.1 55 49.1
PSO339G1175 Papaver somniferum HOM05D000940 ORTHO05D000782 1.4e-07 60.1 55 49.1
SalBow3G0474 Salvia bowleyana HOM05D000940 ORTHO05D000782 1.8e-07 59.7 46 56.5
BcaB04g19356 Brassica carinata HOM05D000940 ORTHO05D000782 2.3e-07 59.3 61 44.3
Nitab4.5_0001623g0040 Nicotiana tabacum HOM05D000940 ORTHO05D000782 2.3e-07 59.3 65 53.8
TAR629G2216 Trochodendron aralioides HOM05D000940 ORTHO05D000782 2.3e-07 59.3 72 40.3
Duzib106G1382 Durio zibethinus HOM05D000940 ORTHO05D000782 3.0e-07 58.9 61 44.3
Hund15120 Selenicereus undatus HOM05D000940 ORTHO05D000782 3.0e-07 58.9 84 39.3
Cfa017701 Carpinus fangiana HOM05D000940 ORTHO05D000782 3.9e-07 58.5 40 65.0
Psat3g087400 Pisum sativum HOM05D000940 ORTHO05D000782 3.9e-07 58.5 55 47.3
SGA_v2.0_scaffold112G31635 Striga asiatica HOM05D000940 ORTHO05D000782 5.1e-07 58.2 48 54.2
Gohir.D11G242300 Gossypium hirsutum HOM05D000940 ORTHO05D000782 6.7e-07 57.8 55 49.1
Gorai.007G256600 Gossypium raimondii HOM05D000940 ORTHO05D000782 6.7e-07 57.8 55 49.1
PGSC0003DMG401017953 Solanum tuberosum HOM05D000940 ORTHO05D000782 6.7e-07 57.8 40 67.5
Ah.12g059780 Amaranthus hybridus HOM05D001400 ORTHO05D001795 8.8e-07 57.4 61 45.9
FvH4_4g31730 Fragaria vesca HOM05D000940 ORTHO05D000782 8.8e-07 57.4 46 54.3
FAN07G0018 Fragaria x ananassa HOM05D000940 ORTHO05D000782 8.8e-07 57.4 46 54.3
FAN12G2640 Fragaria x ananassa HOM05D000940 ORTHO05D000782 8.8e-07 57.4 46 54.3
FAN22G1764 Fragaria x ananassa HOM05D000940 ORTHO05D000782 8.8e-07 57.4 46 54.3
Sopen01g030320 Solanum pennellii HOM05D000940 ORTHO05D000782 8.8e-07 57.4 40 67.5
ATR0697G301 Amborella trichopoda HOM05D000940 ORTHO05D000782 1.1e-06 57.0 46 56.5
BcaNung01797 Brassica carinata HOM05D000940 ORTHO05D039535 1.1e-06 57.0 45 57.8
FAN17G1268 Fragaria x ananassa HOM05D000940 ORTHO05D000782 1.1e-06 57.0 46 54.3
Dinv11155 Davidia involucrata HOM05D000940 ORTHO05D000782 1.5e-06 56.6 55 47.3
Duzib268G1236 Durio zibethinus HOM05D000940 ORTHO05D000782 1.5e-06 56.6 46 54.3
Gohir.A11G231000 Gossypium hirsutum HOM05D000940 ORTHO05D000782 1.5e-06 56.6 61 44.3
Lalb_Chr21g0317281 Lupinus albus HOM05D000940 ORTHO05D000782 1.5e-06 56.6 47 53.2
Medtr6g027720 Medicago truncatula HOM05D000940 ORTHO05D000782 1.5e-06 56.6 55 45.5
Thecc.02G353400 Theobroma cacao HOM05D000940 ORTHO05D000782 1.5e-06 56.6 46 54.3
arahy.Tifrunner.gnm1.ann1.3AJ3RF Arachis hypogaea HOM05D002316 ORTHO05D002280 2.0e-06 56.2 46 52.2
CAN.G106.26 Capsicum annuum HOM05D000940 ORTHO05D000782 2.0e-06 56.2 63 46.0
Medtr7g086420 Medicago truncatula HOM05D000940 ORTHO05D000782 2.0e-06 56.2 55 45.5
Nitab4.5_0028670g0010 Nicotiana tabacum HOM05D000940 ORTHO05D000782 2.0e-06 56.2 46 54.3
QL03p065408 Quercus lobata HOM05D000940 ORTHO05D000782 2.0e-06 56.2 61 44.3
VMungo0251G1587 Vigna mungo HOM05D000940 ORTHO05D000782 2.0e-06 56.2 49 55.1
EL10Ac5g12875 Beta vulgaris HOM05D000940 ORTHO05D000782 2.6e-06 55.8 61 44.3
CANSAT78G2163 Cannabis sativa HOM05D000940 ORTHO05D000782 2.6e-06 55.8 55 45.5
Ca_25683_v3 Cicer arietinum L. HOM05D000940 ORTHO05D000782 2.6e-06 55.8 69 42.0
MBI01_g12911_MAGBIO Magnolia biondii HOM05D000940 ORTHO05D000782 2.6e-06 55.8 55 49.1
Aqoxy3G03309 Aquilegia oxysepala HOM05D000940 ORTHO05D000782 3.3e-06 55.5 46 54.3
arahy.Tifrunner.gnm1.ann1.QV5TSY Arachis hypogaea HOM05D000940 ORTHO05D000782 3.3e-06 55.5 46 52.2
Duzib205G1570 Durio zibethinus HOM05D000940 ORTHO05D000782 3.3e-06 55.5 55 45.5
Lalb_Chr14g0364751 Lupinus albus HOM05D000940 ORTHO05D000782 3.3e-06 55.5 55 43.6
RcHm_v2.0_Chr4g0440331 Rosa chinensis HOM05D000940 ORTHO05D000782 3.3e-06 55.5 46 54.3
TPR.G17859 Trifolium pratense HOM05D000940 ORTHO05D000782 3.3e-06 55.5 55 45.5
TWI39G0293 Tripterygium wilfordii HOM05D000940 ORTHO05D000782 3.3e-06 55.5 55 45.5
GSVIVG01001815001 Vitis vinifera HOM05D000940 ORTHO05D000782 3.3e-06 55.5 46 54.3
EL10Ac4g08763 Beta vulgaris HOM05D000940 ORTHO05D000782 4.4e-06 55.1 62 45.2
AUR62038438 Chenopodium quinoa HOM05D000940 ORTHO05D000782 4.4e-06 55.1 46 56.5
AUR62041181 Chenopodium quinoa HOM05D000940 ORTHO05D000782 4.4e-06 55.1 46 56.5
Dinv33358 Davidia involucrata HOM05D000940 ORTHO05D018859 4.4e-06 55.1 46 54.3
Lj4g0011521 Lotus japonicus HOM05D000940 ORTHO05D000782 4.4e-06 55.1 50 44.0
Lalb_Chr16g0392591 Lupinus albus HOM05D000940 ORTHO05D000782 4.4e-06 55.1 45 53.3
MD16G1077300 Malus domestica HOM05D000940 ORTHO05D000782 4.4e-06 55.1 46 50.0
TPR.G35640 Trifolium pratense HOM05D000940 ORTHO05D000782 4.4e-06 55.1 46 52.2
Atru.chr11.1903 Acer truncatum HOM05D000940 ORTHO05D000782 5.7e-06 54.7 85 36.5
COL.COLO4_23033 Corchorus olitorius HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 52.2
Dinv25672 Davidia involucrata HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 54.3
Glyma.08G297400 Glycine max HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 54.3
Glyma.18G124500 Glycine max HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 54.3
Gohir.A03G098700 Gossypium hirsutum HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 52.2
Gohir.D02G114600 Gossypium hirsutum HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 52.2
Gorai.005G139400 Gossypium raimondii HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 52.2
SalBow2G1549 Salvia bowleyana HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 52.2
SalBow2G2500 Salvia bowleyana HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 52.2
Thecc.03G126300 Theobroma cacao HOM05D000940 ORTHO05D000782 5.7e-06 54.7 46 52.2
Lj3g0021973 Lotus japonicus HOM05D000940 ORTHO05D000782 7.4e-06 54.3 53 47.2
Lalb_Chr22g0358821 Lupinus albus HOM05D000940 ORTHO05D000782 7.4e-06 54.3 55 43.6
Nitab4.5_0004148g0020 Nicotiana tabacum HOM05D000940 ORTHO05D000782 7.4e-06 54.3 45 53.3
Duzib251G0482 Durio zibethinus HOM05D000940 ORTHO05D000782 9.7e-06 53.9 46 50.0
Nn3g16521 Nelumbo nucifera HOM05D000940 ORTHO05D000782 9.7e-06 53.9 46 50.0


User provided reference genes

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