Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000919 Daucus carota HOM05D006001 ORTHO05D006714 1.1e-75 286.6 143 100.0
DCAR_002596 Daucus carota HOM05D006001 ORTHO05D006714 2.9e-73 278.5 143 97.2
DCAR_023481 Daucus carota HOM05D006001 ORTHO05D006714 8.8e-62 240.4 138 87.0
Dinv42605 Davidia involucrata HOM05D006001 ORTHO05D006714 1.7e-17 93.2 154 42.2
Rhsim07G0212300 Rhododendron simsii HOM05D006001 ORTHO05D006714 4.7e-15 85.1 124 46.0
Haze_22467 Corylus avellana HOM05D006001 ORTHO05D006714 7.5e-13 77.8 163 36.8
GSVIVG01009188001 Vitis vinifera HOM05D006001 ORTHO05D006714 2.2e-12 76.3 178 36.5
Haze_22468 Corylus avellana HOM05D006001 ORTHO05D006714 2.9e-12 75.9 164 39.0
Nn6g34170 Nelumbo nucifera HOM05D006001 ORTHO05D006714 1.4e-11 73.6 101 49.5
Gohir.D05G322800 Gossypium hirsutum HOM05D006001 ORTHO05D006714 1.9e-11 73.2 148 41.2
CSS0018086 Camellia sinensis var. sinensis HOM05D006001 ORTHO05D006714 5.4e-11 71.6 127 42.5
QL09p017955 Quercus lobata HOM05D006001 ORTHO05D006714 5.4e-11 71.6 172 36.0
QL12p023212 Quercus lobata HOM05D006001 ORTHO05D006714 5.4e-11 71.6 178 35.4
Gorai.009G346500 Gossypium raimondii HOM05D006001 ORTHO05D006714 7.1e-11 71.2 148 41.2
Gohir.A05G320600 Gossypium hirsutum HOM05D006001 ORTHO05D006714 1.6e-10 70.1 148 39.2
TWI56G0486 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 1.6e-10 70.1 167 36.5
Cfa013804 Carpinus fangiana HOM05D006001 ORTHO05D006714 2.1e-10 69.7 170 35.3
THA.LOC104806890 Tarenaya hassleriana HOM05D006001 ORTHO05D006714 2.7e-10 69.3 148 37.2
TAR381G0479 Trochodendron aralioides HOM05D006001 ORTHO05D006714 1.0e-09 67.4 172 36.0
PSO170G4643 Papaver somniferum HOM05D006001 ORTHO05D006714 2.3e-09 66.2 157 38.2
A03p55330 Brassica napus HOM05D006001 ORTHO05D006714 5.1e-09 65.1 93 46.2
FAN13G1830 Fragaria x ananassa HOM05D006001 ORTHO05D006714 5.1e-09 65.1 166 35.5
PSO210G5625 Papaver somniferum HOM05D006001 ORTHO05D006714 5.1e-09 65.1 155 38.1
Aa31LG4G9600 Aethionema arabicum HOM05D006001 ORTHO05D006714 8.6e-09 64.3 91 44.0
Oeu063699.1 Olea europaea HOM05D006001 ORTHO05D006714 1.1e-08 63.9 159 37.7
COL.COLO4_35255 Corchorus olitorius HOM05D006001 ORTHO05D006714 1.5e-08 63.5 125 40.8
SGA_v2.0_scaffold24G10238 Striga asiatica HOM05D006001 ORTHO05D006714 1.5e-08 63.5 139 42.4
FAN08G3160 Fragaria x ananassa HOM05D006001 ORTHO05D006714 1.9e-08 63.2 166 31.9
BolC7t45854H Brassica oleracea HOM05D006001 ORTHO05D006714 2.5e-08 62.8 96 44.8
Aqoxy5G01371 Aquilegia oxysepala HOM05D006001 ORTHO05D006714 3.3e-08 62.4 158 33.5
Eucgr.L02666 Eucalyptus grandis HOM05D006001 ORTHO05D006714 3.3e-08 62.4 163 35.0
Cpa.g.c29936.2 Carica papaya HOM05D006001 ORTHO05D006714 4.3e-08 62.0 170 34.1
CiPaw.03G148200 Carya illinoinensis HOM05D006001 ORTHO05D006714 5.6e-08 61.6 135 37.8
Nitab4.5_0000354g0120 Nicotiana tabacum HOM05D006001 ORTHO05D006714 5.6e-08 61.6 147 38.1
Oeu034401.1 Olea europaea HOM05D006001 ORTHO05D006714 5.6e-08 61.6 85 51.8
SalBow7G4402 Salvia bowleyana HOM05D006001 ORTHO05D006714 5.6e-08 61.6 83 43.4
Solyc04g076410.3 Solanum lycopersicum HOM05D006001 ORTHO05D006714 5.6e-08 61.6 130 36.2
Eucgr.H00032 Eucalyptus grandis HOM05D006001 ORTHO05D006714 7.3e-08 61.2 163 35.0
Sopen04g030170 Solanum pennellii HOM05D006001 ORTHO05D006714 7.3e-08 61.2 130 36.2
CANSAT11G1699 Cannabis sativa HOM05D006001 ORTHO05D006714 9.5e-08 60.8 155 34.2
CARHR231890 Cardamine hirsuta HOM05D006001 ORTHO05D006714 1.2e-07 60.5 96 46.9
Peaxi162Scf00160g00103 Petunia axillaris HOM05D006001 ORTHO05D006714 1.2e-07 60.5 152 38.2
PGSC0003DMG400009339 Solanum tuberosum HOM05D006001 ORTHO05D006714 1.2e-07 60.5 127 37.8
C01p19810 Brassica napus HOM05D002298 ORTHO05D006714 1.6e-07 60.1 100 43.0
PGSC0003DMG400002050 Solanum tuberosum HOM05D006001 ORTHO05D006714 1.6e-07 60.1 150 40.0
Thecc.08G071800 Theobroma cacao HOM05D006001 ORTHO05D006714 1.6e-07 60.1 99 43.4
BcaC06g32880 Brassica carinata HOM05D006001 ORTHO05D006714 2.1e-07 59.7 93 43.0
A01p15870 Brassica napus HOM05D002298 ORTHO05D006714 2.1e-07 59.7 96 42.7
BolC1t01909H Brassica oleracea HOM05D002298 ORTHO05D006714 2.1e-07 59.7 100 43.0
HanXRQChr03g0093751 Helianthus annuus HOM05D006001 ORTHO05D006714 2.8e-07 59.3 144 36.1
Nn5g29866 Nelumbo nucifera HOM05D006001 ORTHO05D006714 3.6e-07 58.9 96 43.8
Thhalv10025760m.g Eutrema salsugineum HOM05D006001 ORTHO05D006714 4.7e-07 58.5 97 44.3
Lsat_1_v5_gn_3_133380 Lactuca sativa HOM05D006001 ORTHO05D006714 4.7e-07 58.5 144 36.8
Actinidia19626 Actinidia chinensis HOM05D006001 ORTHO05D006714 6.2e-07 58.2 90 46.7
C07p53620 Brassica napus HOM05D006001 ORTHO05D006714 6.2e-07 58.2 93 41.9
CAN.G1700.2 Capsicum annuum HOM05D006001 ORTHO05D006714 6.2e-07 58.2 150 37.3
Lj4A738G22 Lonicera japonica HOM05D006001 ORTHO05D006714 6.2e-07 58.2 87 44.8
MBI16_g12475_MAGBIO Magnolia biondii HOM05D006001 ORTHO05D006714 8.1e-07 57.8 107 38.3
RcHm_v2.0_Chr7g0235791 Rosa chinensis HOM05D006001 ORTHO05D006714 8.1e-07 57.8 169 33.7
Solyc12g087990.3 Solanum lycopersicum HOM05D006001 ORTHO05D006714 8.1e-07 57.8 150 38.0
SGA_v2.0_scaffold20G09128 Striga asiatica HOM05D006001 ORTHO05D006714 8.1e-07 57.8 160 37.5
CiPaw.07G164600 Carya illinoinensis HOM05D006001 ORTHO05D006714 1.1e-06 57.4 178 32.6
Sopen12g030020 Solanum pennellii HOM05D006001 ORTHO05D006714 1.1e-06 57.4 151 39.1
EL10Ac1g00506 Beta vulgaris HOM05D034668 ORTHO05D006714 1.8e-06 56.6 136 35.3
Carub.0007s1657 Capsella rubella HOM05D006001 ORTHO05D006714 1.8e-06 56.6 130 39.2
Cc00_g15770 Coffea canephora HOM05D006001 ORTHO05D006714 1.8e-06 56.6 122 36.1
Sc04g0007160 Simmondsia chinensis HOM05D006001 ORTHO05D006714 1.8e-06 56.6 75 48.0
BraA01t01521Z Brassica rapa HOM05D002298 ORTHO05D006714 2.4e-06 56.2 101 41.6
Hund26817 Selenicereus undatus HOM05D006001 ORTHO05D006714 2.4e-06 56.2 138 32.6
Ciclev10001506m.g Citrus clementina HOM05D006001 ORTHO05D006714 6.8e-06 54.7 89 43.8
unitig_578.g16728 Utricularia gibba HOM05D006001 ORTHO05D006714 6.8e-06 54.7 102 41.2
Sp7g22490 Schrenkiella parvula HOM05D006001 ORTHO05D006714 8.9e-06 54.3 93 40.9
SEGI_15482 Sequoiadendron giganteum HOM05D006001 ORTHO05D006714 8.9e-06 54.3 79 46.8


User provided reference genes

Program Settings