Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 2.9e-186 655.2 366 100.0
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 9.8e-158 560.5 371 87.3
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 1.9e-116 423.3 281 82.2
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 1.2e-86 324.3 395 51.4
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 5.9e-86 322.0 299 61.9
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 3.6e-83 312.8 291 61.5
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 2.0e-81 307.0 293 58.4
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 4.4e-81 305.8 387 51.7
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.3e-80 304.3 290 59.3
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.7e-80 303.9 279 62.4
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 4.1e-79 299.3 383 51.4
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 7.0e-79 298.5 375 52.3
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 7.7e-78 295.0 368 53.5
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.2e-75 287.7 320 53.8
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 3.6e-75 286.2 287 57.1
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 3.6e-75 286.2 379 50.4
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.0e-74 284.6 278 56.5
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 3.0e-74 283.1 384 53.1
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.0e-74 282.7 278 56.1
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 5.2e-74 282.3 371 53.6
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.5e-73 280.8 379 54.4
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 2.0e-73 280.4 360 53.3
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 4.4e-73 279.3 378 48.9
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 7.5e-73 278.5 370 53.0
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 2.8e-72 276.6 375 50.7
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 6.3e-72 275.4 386 47.9
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 6.3e-72 275.4 289 56.7
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 8.2e-72 275.0 374 48.9
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 8.2e-72 275.0 291 55.3
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 7.0e-71 271.9 297 58.6
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.0e-70 270.4 300 56.0
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 2.0e-70 270.4 362 48.9
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.5e-70 269.6 307 51.1
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.5e-70 269.2 281 58.7
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 4.5e-70 269.2 368 52.7
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 7.7e-70 268.5 295 57.3
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 5.0e-69 265.8 375 49.3
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 5.0e-69 265.8 379 51.5
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 5.0e-69 265.8 307 51.1
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 6.5e-69 265.4 301 52.8
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 8.5e-69 265.0 373 49.6
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 1.1e-68 264.6 286 53.8
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.1e-68 264.6 375 50.9
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.5e-68 264.2 376 49.5
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 3.2e-68 263.1 296 57.1
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 7.2e-68 261.9 287 53.3
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 9.4e-68 261.5 372 49.5
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 9.4e-68 261.5 290 53.1
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 4.7e-67 259.2 294 55.1
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.7e-67 259.2 371 51.2
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 8.0e-67 258.5 384 51.8
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 8.0e-67 258.5 313 53.7
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.8e-66 257.3 309 52.4
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.3e-64 251.1 382 50.8
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 1.3e-64 251.1 275 55.6
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 3.7e-64 249.6 363 52.3
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 6.3e-64 248.8 278 54.7
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.4e-63 247.7 381 45.7
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 1.4e-63 247.7 381 48.8
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 3.1e-63 246.5 368 48.9
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 4.1e-63 246.1 263 55.5
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 7.0e-63 245.4 372 48.9
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.2e-62 244.6 277 53.8
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.6e-62 244.2 235 58.3
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 2.0e-62 243.8 496 36.7
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 1.0e-61 241.5 290 49.7
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 1.7e-61 240.7 369 46.1
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 1.7e-61 240.7 355 49.3
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.9e-61 240.0 380 45.8
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 2.9e-61 240.0 289 49.1
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 6.5e-61 238.8 282 50.4
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 8.5e-61 238.4 374 47.9
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 8.5e-61 238.4 291 49.1
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 1.1e-60 238.0 296 50.3
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 2.5e-60 236.9 291 48.8
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 2.5e-60 236.9 381 46.5
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 5.5e-60 235.7 377 48.8
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 7.2e-60 235.3 380 43.9
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 7.2e-60 235.3 255 53.7
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 1.2e-59 234.6 295 48.1
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 2.1e-59 233.8 372 47.8
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 3.0e-58 229.9 206 60.2
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 3.0e-58 229.9 294 48.6
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 2.0e-57 227.3 240 53.3
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 2.6e-57 226.9 381 44.6
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 5.7e-57 225.7 290 51.4
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 2.8e-56 223.4 282 47.2
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 3.7e-56 223.0 273 49.1
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 1.8e-55 220.7 287 51.2
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 2.0e-54 217.2 292 46.9
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 4.5e-54 216.1 282 47.9
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 3.8e-53 213.0 315 47.3
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.1e-52 211.5 318 45.9
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.0e-50 204.9 263 48.3
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.8e-50 204.1 306 45.1
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 3.0e-50 203.4 370 40.0
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 4.4e-49 199.5 305 44.9
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 7.5e-49 198.7 361 39.3
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 3.2e-47 193.4 352 40.1
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 4.1e-47 193.0 190 57.4
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 5.9e-46 189.1 242 46.7
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.7e-45 187.6 235 48.9
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 1.1e-44 184.9 281 47.3
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 9.5e-44 181.8 318 41.2
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 6.2e-43 179.1 312 42.0
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 4.0e-42 176.4 364 37.4
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.3e-40 171.4 155 59.4
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 7.0e-39 165.6 268 42.5
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 4.7e-35 152.9 282 42.6
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 1.8e-34 151.0 255 36.9
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 2.4e-31 140.6 250 36.8
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 2.5e-28 130.6 294 33.3
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 8.9e-26 122.1 207 41.1
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 7.1e-23 112.5 278 31.3
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.7e-21 107.8 90 61.1
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 5.1e-21 106.3 102 57.8
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 6.6e-21 105.9 203 39.9
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 5.2e-18 96.3 313 31.6
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 3.6e-11 73.6 108 44.4
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 9.9e-09 65.5 206 35.4
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 1.9e-07 61.2 205 34.1
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 6.0e-06 56.2 220 27.3


User provided reference genes

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