Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 8.7e-111 403.7 207 100.0
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 7.6e-107 390.6 207 97.1
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 3.5e-104 381.7 207 95.2
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 2.9e-90 335.5 208 85.6
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 1.8e-76 289.7 207 74.4
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 2.0e-75 286.2 208 75.0
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 2.0e-75 286.2 207 74.9
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 7.7e-75 284.3 207 72.9
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 1.6e-72 276.6 208 73.1
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 6.1e-72 274.6 207 72.9
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 1.4e-71 273.5 207 71.5
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 1.8e-71 273.1 207 71.0
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 3.0e-71 272.3 208 75.0
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 3.0e-71 272.3 208 75.0
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 3.9e-71 271.9 208 75.0
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 6.7e-71 271.2 208 75.0
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.5e-70 270.0 208 74.5
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 1.5e-70 270.0 216 69.9
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 2.0e-70 269.6 206 70.9
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 9.7e-70 267.3 207 72.5
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 2.2e-69 266.2 208 71.2
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 3.7e-69 265.4 210 74.8
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 6.3e-69 264.6 208 72.1
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 1.1e-68 263.8 214 70.6
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 1.8e-68 263.1 207 69.1
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 2.4e-68 262.7 213 69.0
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 1.6e-67 260.0 206 70.9
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 1.6e-67 260.0 207 70.5
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 4.5e-67 258.5 207 70.0
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 2.9e-66 255.8 219 68.0
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 2.9e-66 255.8 209 67.9
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 5.0e-66 255.0 211 67.8
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 6.5e-66 254.6 210 71.9
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 3.2e-65 252.3 210 68.1
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 4.2e-65 251.9 209 68.9
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 7.2e-65 251.1 218 67.0
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 2.1e-64 249.6 207 64.3
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 2.1e-64 249.6 207 64.7
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 2.1e-64 249.6 208 65.4
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 2.1e-64 249.6 212 67.9
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 4.7e-64 248.4 208 67.3
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 4.7e-64 248.4 208 67.3
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 3.0e-63 245.7 209 67.5
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 8.8e-63 244.2 213 67.1
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 1.2e-62 243.8 209 66.0
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 1.2e-62 243.8 207 68.6
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 1.2e-62 243.8 208 67.3
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 2.6e-62 242.7 207 65.7
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 4.4e-62 241.9 213 66.7
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 7.5e-62 241.1 211 63.5
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 9.7e-62 240.7 212 65.6
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 2.2e-61 239.6 209 66.0
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 3.7e-61 238.8 209 65.1
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 6.3e-61 238.0 210 66.2
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 6.3e-61 238.0 209 64.1
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 6.3e-61 238.0 208 65.4
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 1.1e-60 237.3 209 66.0
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 1.1e-60 237.3 218 63.3
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 1.1e-60 237.3 215 67.4
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 1.4e-60 236.9 207 65.7
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 1.4e-60 236.9 211 64.9
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 1.8e-60 236.5 207 66.2
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 1.8e-60 236.5 209 66.0
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 3.1e-60 235.7 212 66.0
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 3.1e-60 235.7 212 64.2
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 5.3e-60 235.0 209 66.5
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 5.3e-60 235.0 212 64.6
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 7.0e-60 234.6 209 66.0
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 7.0e-60 234.6 209 66.0
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 7.0e-60 234.6 214 64.5
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 7.0e-60 234.6 207 63.3
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 7.0e-60 234.6 207 65.7
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 9.1e-60 234.2 212 64.2
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 2.0e-59 233.0 212 63.7
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 2.0e-59 233.0 214 62.6
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 2.0e-59 233.0 212 64.2
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 2.0e-59 233.0 212 63.7
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 2.0e-59 233.0 214 62.6
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 2.0e-59 233.0 210 67.1
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 2.0e-59 233.0 214 65.9
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 2.7e-59 232.6 213 64.3
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 2.7e-59 232.6 211 63.5
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 2.7e-59 232.6 208 65.4
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 3.5e-59 232.3 209 64.1
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 3.5e-59 232.3 208 65.4
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 3.5e-59 232.3 204 63.7
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 4.5e-59 231.9 204 63.7
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 5.9e-59 231.5 208 66.8
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 7.7e-59 231.1 212 66.0
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 7.7e-59 231.1 216 65.3
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 7.7e-59 231.1 211 63.5
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 1.0e-58 230.7 211 64.5
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.3e-58 230.3 216 65.3
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 1.7e-58 229.9 214 65.0
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 2.9e-58 229.2 209 64.6
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 5.0e-58 228.4 211 64.5
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 5.0e-58 228.4 211 64.5
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 5.0e-58 228.4 211 64.5
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 5.0e-58 228.4 204 63.2
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 6.5e-58 228.0 211 64.0
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 6.5e-58 228.0 207 64.3
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 6.5e-58 228.0 207 64.3
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 8.5e-58 227.6 206 65.0
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 8.5e-58 227.6 207 63.8
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 8.5e-58 227.6 216 63.9
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 1.1e-57 227.3 206 63.1
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 1.5e-57 226.9 207 64.7
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 1.5e-57 226.9 211 64.5
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 9.4e-57 224.2 179 69.8
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 1.2e-56 223.8 210 62.4
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 2.1e-56 223.0 208 63.5
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 2.7e-56 222.6 207 62.8
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 3.6e-56 222.2 178 68.5
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 4.7e-56 221.9 153 73.9
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 1.4e-55 220.3 212 65.1
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 4.0e-55 218.8 190 64.2
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 5.2e-55 218.4 115 93.0
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 6.8e-55 218.0 208 62.5
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 1.5e-54 216.9 210 62.4
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 2.0e-54 216.5 207 60.9
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 2.0e-54 216.5 117 90.6
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 9.8e-54 214.2 149 73.8
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 1.7e-53 213.4 104 99.0
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 2.2e-53 213.0 187 63.6
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 3.7e-53 212.2 111 91.9
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 8.3e-53 211.1 209 60.3
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 8.3e-53 211.1 104 98.1
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 1.8e-52 209.9 190 61.6
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 5.4e-52 208.4 104 95.2
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 7.0e-52 208.0 104 96.2
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 5.9e-51 204.9 186 60.8
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 5.9e-51 204.9 104 94.2
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 3.8e-50 202.2 207 57.0
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 3.3e-49 199.1 110 89.1
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 1.2e-48 197.2 209 56.9
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 8.9e-47 191.0 100 90.0
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 2.0e-46 189.9 103 91.3
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 9.2e-44 181.0 124 71.0
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 5.0e-42 175.3 100 81.0
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.5e-41 173.7 102 80.4
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 9.5e-41 171.0 111 72.1
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 2.8e-40 169.5 206 50.5
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 2.2e-37 159.8 101 75.2
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 5.4e-36 155.2 101 69.3
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 6.0e-35 151.8 162 56.2
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 1.6e-32 143.7 102 64.7
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 2.6e-30 136.3 132 53.0
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 1.1e-23 114.4 100 52.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 2.2e-21 106.7 159 36.5
vmacro17432 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 2.5e-09 66.6 210 32.9


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