Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G015110 Cucumis sativus L. HOM05D001954 ORTHO05D001966 1.9e-49 199.1 118 100.0
CsaV3_7G018830 Cucumis sativus L. HOM05D001954 ORTHO05D001966 2.3e-31 139.0 93 100.0
CsaV3_7G018840 Cucumis sativus L. HOM05D001954 ORTHO05D001966 4.3e-30 134.8 93 88.2
MELO3C013107.2 Cucumis melo HOM05D001954 ORTHO05D001966 6.2e-29 131.0 93 87.1
CsaV3_6G027390 Cucumis sativus L. HOM05D001954 ORTHO05D001966 2.4e-28 129.0 97 84.5
ClCG09G020910 Citrullus lanatus HOM05D001954 ORTHO05D001966 2.2e-26 122.5 93 79.6
Sed0021038 Sechium edule HOM05D001954 ORTHO05D001966 1.2e-19 100.1 93 80.6
Sed0014590 Sechium edule HOM05D001954 ORTHO05D001966 1.3e-18 96.7 93 54.8
MD03G1191000 Malus domestica HOM05D001954 ORTHO05D001966 1.3e-13 80.1 91 50.5
Prupe.4G227500 Prunus persica HOM05D001954 ORTHO05D001966 1.1e-12 77.0 93 45.2
CiPaw.12G134800 Carya illinoinensis HOM05D001954 ORTHO05D001966 1.4e-12 76.6 93 47.3
Sabra16G0237500 Salix brachista HOM05D001954 ORTHO05D001966 2.4e-12 75.9 93 47.3
Potri.001G359900 Populus trichocarpa HOM05D001954 ORTHO05D001966 3.1e-12 75.5 93 45.2
Ciclev10007252m.g Citrus clementina HOM05D001954 ORTHO05D001966 4.0e-12 75.1 93 46.2
Duzib213G0929 Durio zibethinus HOM05D001954 ORTHO05D001966 1.2e-11 73.6 93 46.2
Sc16g0005350 Simmondsia chinensis HOM05D001954 ORTHO05D001966 1.2e-11 73.6 103 45.6
Atru.chr2.3581 Acer truncatum HOM05D001954 ORTHO05D001966 1.5e-11 73.2 93 44.1
Gohir.A01G085300 Gossypium hirsutum HOM05D001954 ORTHO05D001966 1.5e-11 73.2 93 58.1
Gohir.D01G071700 Gossypium hirsutum HOM05D001954 ORTHO05D001966 2.6e-11 72.4 93 48.4
Gorai.002G094500 Gossypium raimondii HOM05D001954 ORTHO05D001966 2.6e-11 72.4 93 48.4
CiPaw.11G196400 Carya illinoinensis HOM05D001954 ORTHO05D001966 5.8e-11 71.2 91 45.1
FvH4_3g23690 Fragaria vesca HOM05D001954 ORTHO05D001966 5.8e-11 71.2 92 44.6
RcHm_v2.0_Chr5g0041831 Rosa chinensis HOM05D001954 ORTHO05D001966 5.8e-11 71.2 93 57.0
GSVIVG01037749001 Vitis vinifera HOM05D001954 ORTHO05D001966 7.6e-11 70.9 92 45.7
Haze_09760 Corylus avellana HOM05D001954 ORTHO05D001966 9.9e-11 70.5 90 50.0
TAR626G0247 Trochodendron aralioides HOM05D001954 ORTHO05D001966 1.3e-10 70.1 96 43.8
Cfa020260 Carpinus fangiana HOM05D001954 ORTHO05D001966 1.7e-10 69.7 93 49.5
Thecc.07G025200 Theobroma cacao HOM05D001954 ORTHO05D001966 2.9e-10 68.9 91 49.5
Rhsim04G0016000 Rhododendron simsii HOM05D001954 ORTHO05D001966 4.9e-10 68.2 95 40.0
MD11G1208000 Malus domestica HOM05D001954 ORTHO05D001966 8.4e-10 67.4 91 44.0
Lsat_1_v5_gn_5_185161 Lactuca sativa HOM05D001954 ORTHO05D001966 1.1e-09 67.0 92 43.5
Oeu057072.1 Olea europaea HOM05D001954 ORTHO05D001966 3.2e-09 65.5 102 42.2
QL08p008163 Quercus lobata HOM05D001954 ORTHO05D001966 3.2e-09 65.5 93 49.5
RcHm_v2.0_Chr5g0041871 Rosa chinensis HOM05D001954 ORTHO05D001966 4.2e-09 65.1 93 39.8
Hma1.2p1_0036F.1_g023000 Hydrangea macrophylla HOM05D001954 ORTHO05D001966 7.1e-09 64.3 102 39.2
CSS0036878 Camellia sinensis var. sinensis HOM05D001954 ORTHO05D001966 9.3e-09 63.9 92 40.2
PGR031G2509 Punica granatum HOM05D001954 ORTHO05D001966 1.2e-08 63.5 92 40.2
Manes.15G064900 Manihot esculenta HOM05D001954 ORTHO05D001966 2.1e-08 62.8 111 38.7
Nn1g07384 Nelumbo nucifera HOM05D001954 ORTHO05D001966 2.1e-08 62.8 93 39.8
TWI38G0084 Tripterygium wilfordii HOM05D001954 ORTHO05D001966 2.7e-08 62.4 93 45.2
TPR.G23605 Trifolium pratense HOM05D001954 ORTHO05D001966 4.6e-08 61.6 95 37.9
HanXRQChr08g0233671 Helianthus annuus HOM05D001954 ORTHO05D001966 1.0e-07 60.5 93 41.9
Psat5g172680 Pisum sativum HOM05D001954 ORTHO05D001966 1.0e-07 60.5 95 35.8
THA.LOC104811641 Tarenaya hassleriana HOM05D001954 ORTHO05D001966 1.0e-07 60.5 93 48.4
Ca_06354_v3 Cicer arietinum L. HOM05D001954 ORTHO05D001966 1.3e-07 60.1 93 37.6
Lalb_Chr18g0050351 Lupinus albus HOM05D001954 ORTHO05D001966 1.3e-07 60.1 92 37.0
QL08p029610 Quercus lobata HOM05D001954 ORTHO05D001966 1.3e-07 60.1 93 38.7
Actinidia10784 Actinidia chinensis HOM05D001954 ORTHO05D001966 1.8e-07 59.7 93 38.7
MSTRG.15775 Avicennia marina HOM05D001954 ORTHO05D001966 1.8e-07 59.7 93 43.0
TAR624G0479 Trochodendron aralioides HOM05D001954 ORTHO05D001966 1.8e-07 59.7 96 42.7
Psat2g010480 Pisum sativum HOM05D001954 ORTHO05D001966 2.3e-07 59.3 93 36.6
AT5G55390 Arabidopsis thaliana HOM05D001954 ORTHO05D001966 3.9e-07 58.5 98 41.8
Ca_14774_v3 Cicer arietinum L. HOM05D001954 ORTHO05D001966 3.9e-07 58.5 96 36.5
Duzib138G0658 Durio zibethinus HOM05D001954 ORTHO05D001966 3.9e-07 58.5 91 39.6
Lj6g0026788 Lotus japonicus HOM05D001954 ORTHO05D001966 3.9e-07 58.5 93 38.7
ECA246G3961 Erigeron canadensis HOM05D001954 ORTHO05D001966 5.1e-07 58.2 95 40.0
Cc00_g04650 Coffea canephora HOM05D001954 ORTHO05D001966 6.7e-07 57.8 93 35.5
Aqoxy7G01880 Aquilegia oxysepala HOM05D001954 ORTHO05D001966 8.7e-07 57.4 95 37.9
Glyma.18G086000 Glycine max HOM05D001954 ORTHO05D001966 1.1e-06 57.0 95 36.8
HanXRQChr02g0038491 Helianthus annuus HOM05D001954 ORTHO05D001966 1.1e-06 57.0 95 46.3
Medtr3g055370 Medicago truncatula HOM05D001954 ORTHO05D001966 1.1e-06 57.0 96 36.5
TPR.G30637 Trifolium pratense HOM05D001954 ORTHO05D000531 1.1e-06 57.0 93 35.5
AL8G30940 Arabidopsis lyrata HOM05D001954 ORTHO05D001966 1.9e-06 56.2 98 39.8
Carub.0008s1573 Capsella rubella HOM05D001954 ORTHO05D001966 1.9e-06 56.2 93 52.7
Hma1.2p1_0133F.1_g060970 Hydrangea macrophylla HOM05D001954 ORTHO05D001966 1.9e-06 56.2 91 38.5
CANSAT11G1908 Cannabis sativa HOM05D001954 ORTHO05D001966 2.5e-06 55.8 94 37.2
FvH4_5g31160 Fragaria vesca HOM05D001954 ORTHO05D001966 2.5e-06 55.8 93 34.4
Rhsim06G0224600 Rhododendron simsii HOM05D001954 ORTHO05D001966 2.5e-06 55.8 92 38.0
COL.COLO4_35988 Corchorus olitorius HOM05D001954 ORTHO05D001966 4.3e-06 55.1 92 54.3
Dinv07830 Davidia involucrata HOM05D001954 ORTHO05D001966 7.4e-06 54.3 93 40.9
Phvul.006G049800 Phaseolus vulgaris HOM05D001954 ORTHO05D001966 7.4e-06 54.3 96 36.5
VMungo0540G1297 Vigna mungo HOM05D001954 ORTHO05D001966 9.6e-06 53.9 96 36.5


User provided reference genes

Program Settings