Gene: Carub.0008s1573

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1573
  • Transcript Identifier Carub.0008s1573.1
  • Gene Type Coding gene
  • Location scaffold_8 : 8568191-8574475 : negative

Gene Family Information

  • ID HOM05D001954
  • #Genes/#Species 339/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1573.v1.1
  • pacid 39252520
  • synonym Carubv10025745m.g

Descriptions

  • Description PTHR22884//PTHR22884:SF340 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE SU(VAR)3-9-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G55390
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT5G55390
GO:2000024
ISO
PLAZA Integrative Orthologyregulation of leaf development AT5G55390
GO:0031937
ISO
PLAZA Integrative Orthologypositive regulation of chromatin silencing AT5G55390
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT5G55390
GO:0090436
ISO
PLAZA Integrative Orthologyleaf pavement cell development AT5G55390
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT5G55390
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G55390
GO:1900363
ISO
PLAZA Integrative Orthologyregulation of mRNA polyadenylation AT5G55390
GO:0070829
ISO
PLAZA Integrative Orthologyheterochromatin maintenance AT5G55390
GO:1900111
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K9 dimethylation AT5G55390
GO:0061087
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K27 methylation AT5G55390
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction AT5G55390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G55390
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G55390
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G55390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G55390
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT5G55390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001965 Zinc finger, PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
12.5.2.5.3 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.ASI1-AIPP1-EDM2 chromatin silencing regulator complex.component EDM2