Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 5.2e-142 507.7 250 100.0
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 3.7e-116 421.8 226 93.4
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 6.8e-102 374.4 254 79.5
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 2.6e-85 319.3 250 69.2
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 4.4e-85 318.5 255 67.1
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.3e-84 317.0 255 65.5
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.4e-83 313.5 229 69.0
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.4e-83 312.8 243 68.3
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.4e-83 312.8 243 68.3
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.2e-83 312.0 235 70.2
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 5.4e-83 311.6 219 70.8
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.1e-82 309.7 175 84.0
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.1e-82 309.7 253 65.2
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 2.7e-82 309.3 251 65.7
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 4.6e-82 308.5 185 82.7
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 6.0e-82 308.1 252 67.1
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 1.0e-81 307.4 234 69.2
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 1.0e-81 307.4 234 70.1
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.3e-81 307.0 252 65.5
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.7e-81 306.6 237 68.4
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.7e-81 306.6 237 68.4
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 2.3e-81 306.2 252 63.9
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 3.0e-81 305.8 175 82.9
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 3.9e-81 305.4 238 66.4
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 8.7e-81 304.3 238 67.6
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.1e-80 303.9 237 67.5
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.9e-80 303.1 249 65.5
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.9e-80 303.1 253 64.0
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 3.3e-80 302.4 178 81.5
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 4.3e-80 302.0 175 82.9
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 5.6e-80 301.6 250 65.6
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 7.3e-80 301.2 175 81.7
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 7.3e-80 301.2 176 81.8
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 4.8e-79 298.5 231 67.5
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 4.8e-79 298.5 242 65.3
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 6.2e-79 298.1 192 75.5
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.1e-78 297.4 220 68.6
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.4e-78 297.0 181 80.7
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.4e-78 297.0 174 81.0
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 2.4e-78 296.2 234 67.9
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 3.1e-78 295.8 246 62.6
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 5.3e-78 295.0 235 66.8
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.2e-77 293.9 214 71.0
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.6e-77 292.7 176 79.5
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 2.6e-77 292.7 217 69.1
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 3.4e-77 292.4 263 62.4
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 3.4e-77 292.4 217 68.2
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 4.5e-77 292.0 239 64.4
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 5.8e-77 291.6 175 80.0
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 5.8e-77 291.6 197 74.1
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 5.8e-77 291.6 251 64.1
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 7.6e-77 291.2 184 75.5
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 7.6e-77 291.2 178 78.7
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 9.9e-77 290.8 229 65.9
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 2.2e-76 289.7 253 61.7
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 2.2e-76 289.7 253 61.7
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 2.9e-76 289.3 233 67.4
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 3.8e-76 288.9 220 66.8
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 4.9e-76 288.5 170 80.0
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 1.1e-75 287.3 227 64.3
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 1.4e-75 287.0 239 62.3
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 2.4e-75 286.2 241 57.3
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 4.2e-75 285.4 170 79.4
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 7.1e-75 284.6 220 66.4
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 9.3e-75 284.3 180 77.2
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 4.6e-74 282.0 168 77.4
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.3e-73 280.4 255 60.8
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.3e-73 280.4 207 68.6
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 3.9e-73 278.9 233 63.5
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 5.1e-73 278.5 171 76.0
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.9e-72 276.6 234 63.2
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 2.5e-72 276.2 164 80.5
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 7.4e-72 274.6 225 64.0
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 2.8e-71 272.7 178 71.9
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 2.8e-71 272.7 227 64.3
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 2.8e-71 272.7 227 64.3
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 2.8e-71 272.7 227 64.3
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 3.6e-71 272.3 158 82.3
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 3.6e-71 272.3 243 60.5
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 4.8e-71 271.9 169 78.1
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 6.2e-71 271.6 188 71.3
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.4e-70 270.4 181 73.5
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 5.3e-70 268.5 228 61.4
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 9.0e-70 267.7 164 76.8
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.2e-69 267.3 233 61.4
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 2.6e-69 266.2 182 73.1
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.3e-68 263.8 197 68.0
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 2.2e-68 263.1 228 61.0
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 2.4e-67 259.6 183 71.6
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.5e-66 255.8 158 76.6
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.1e-64 250.8 191 63.4
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.5e-64 250.4 267 53.2
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 9.6e-64 247.7 175 76.0
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.1e-63 246.5 189 67.7
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.8e-63 246.1 194 67.5
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 1.7e-60 236.9 193 63.2
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.9e-59 233.4 164 66.5
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.8e-57 226.9 173 64.2
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 9.6e-56 221.1 205 60.0
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 7.6e-53 211.5 131 75.6
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 1.8e-49 200.3 126 74.6
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 5.1e-49 198.7 199 57.8
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 8.7e-49 198.0 115 81.7
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 1.4e-46 190.7 210 50.5
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 9.1e-46 188.0 118 74.6
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.2e-44 183.3 114 74.6
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 4.6e-42 175.6 114 71.9
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 6.1e-42 175.3 114 71.1
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 7.4e-40 168.3 123 71.5
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.8e-38 163.7 187 47.1
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.8e-38 163.7 168 55.4
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 1.2e-37 161.0 177 46.9
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 2.2e-36 156.8 109 68.8
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.4e-22 110.9 153 39.9
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 8.8e-17 91.7 117 48.7
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 1.8e-14 84.0 177 29.4
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 1.6e-13 80.9 168 29.8
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.7e-12 77.4 56 66.1
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 2.9e-12 76.6 183 27.3
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.4e-08 62.8 67 47.8
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.3e-07 61.2 60 53.3
AagrBONN_evm.TU.Sc2ySwM_340.195 Anthoceros agrestis HOM05D006649 ORTHO05D023509 3.1e-06 56.6 104 31.7


User provided reference genes

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