Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 0.0e+00 1251.5 626 100.0
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 0.0e+00 1187.6 626 94.4
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 8.6e-311 1069.7 626 85.9
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 2.4e-297 1025.0 623 83.3
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 2.5e-286 988.4 627 77.5
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 6.8e-284 980.3 631 76.4
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 2.0e-283 978.8 628 77.1
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 3.9e-279 964.5 627 75.0
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 5.0e-279 964.1 627 75.3
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.1e-277 958.7 627 75.3
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 3.6e-277 958.0 631 75.3
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 4.4e-275 951.0 629 73.9
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 3.7e-274 948.0 675 70.8
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 1.4e-273 946.0 631 74.5
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.1e-272 942.2 610 76.6
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 1.9e-270 935.6 631 73.1
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 2.5e-270 935.3 631 73.1
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 2.8e-269 931.8 631 72.9
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 6.8e-268 927.2 631 72.9
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.5e-267 926.0 631 73.1
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 7.6e-267 923.7 627 73.2
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.9e-265 919.1 628 73.7
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 4.1e-265 917.9 608 73.2
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 7.1e-265 917.1 631 71.6
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 9.2e-265 916.8 626 73.2
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 2.7e-264 915.2 627 71.8
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 6.0e-264 914.1 627 72.9
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 7.8e-264 913.7 627 70.7
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 1.0e-263 913.3 631 72.6
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 1.3e-263 912.9 626 70.8
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.3e-263 912.1 635 71.2
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 2.3e-263 912.1 635 70.9
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.1e-262 909.8 627 73.0
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.3e-262 907.9 635 71.0
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 8.1e-261 903.7 653 70.3
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 3.1e-260 901.7 627 69.5
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 8.9e-260 900.2 635 69.9
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 8.9e-260 900.2 627 72.2
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.5e-259 899.4 635 70.4
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 3.4e-259 898.3 632 71.0
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 2.2e-258 895.6 627 71.5
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 4.2e-257 891.3 627 71.5
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 7.1e-257 890.6 635 70.2
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 1.6e-256 889.4 627 70.7
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 4.6e-256 887.9 627 70.7
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 6.0e-256 887.5 631 71.0
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 1.0e-255 886.7 630 68.9
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.3e-255 885.6 627 68.9
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.0e-255 885.2 631 70.2
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 5.1e-255 884.4 627 68.6
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.9e-254 882.5 628 70.2
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 5.6e-254 880.9 624 69.2
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 4.8e-253 877.9 624 67.9
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 4.8e-253 877.9 613 71.0
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 4.0e-252 874.8 573 75.4
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.0e-252 874.8 592 72.8
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 4.0e-252 874.8 607 69.5
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 9.0e-252 873.6 451 97.3
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.3e-250 869.8 629 68.8
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.3e-250 869.8 595 72.1
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 2.9e-250 868.6 624 67.6
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 6.4e-250 867.5 626 69.8
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.1e-249 866.7 666 66.8
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 2.7e-248 862.1 635 68.8
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 3.5e-248 861.7 627 67.8
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 2.3e-247 859.0 624 67.8
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.5e-246 856.3 602 69.9
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 2.5e-246 855.5 615 70.9
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 6.2e-245 850.9 624 69.2
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.8e-244 849.4 629 67.2
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 2.4e-244 849.0 635 66.8
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 2.4e-244 849.0 629 66.0
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 4.2e-241 838.2 633 65.7
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 5.5e-241 837.8 630 67.0
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 6.7e-239 830.9 635 65.8
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.9e-238 829.3 631 64.5
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 5.6e-238 827.8 631 64.7
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 5.6e-238 827.8 586 69.3
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 8.1e-237 823.9 632 66.0
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.5e-235 819.7 572 69.1
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 2.0e-235 819.3 633 64.3
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 2.0e-235 819.3 633 64.3
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 7.6e-235 817.4 630 65.1
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.4e-233 813.1 626 64.9
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.6e-232 808.1 590 67.6
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 7.6e-227 790.8 626 64.2
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.9e-225 786.2 626 63.6
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 4.5e-219 765.0 628 61.8
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.3e-218 763.5 566 67.3
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 3.8e-210 735.3 624 59.0
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 3.3e-206 722.2 602 59.6
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 4.0e-191 672.2 440 76.4
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 9.2e-180 634.4 448 69.6
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 9.2e-180 634.4 492 63.6
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 8.6e-178 627.9 634 49.1
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 3.7e-173 612.5 416 72.1
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 3.9e-170 602.4 640 49.1
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 3.0e-162 576.2 398 72.4
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 4.7e-152 542.3 600 48.2
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.7e-149 533.9 418 66.5
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.7e-146 523.9 399 65.4
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 8.6e-146 521.5 627 45.8
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 7.1e-124 448.7 603 43.8
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 9.0e-119 431.8 421 58.0
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.5e-105 387.9 766 33.0
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.5e-97 361.3 274 69.3
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 2.3e-50 204.5 182 54.9
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 2.7e-46 191.0 172 57.0
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 6.2e-43 179.9 163 56.4
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.0e-41 174.9 152 58.6
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 2.9e-40 171.0 210 44.3
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 5.8e-33 146.7 82 81.7
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 2.3e-21 108.2 79 74.7
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 2.0e-17 95.1 85 58.8
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 5.8e-17 93.6 88 55.7
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 3.4e-09 67.8 40 72.5
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 9.9e-09 66.2 35 82.9
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 2.4e-07 61.6 41 70.7
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 7.1e-07 60.1 226 26.5
COL.COLO4_22600 Corchorus olitorius HOM05D002762 ORTHO05D155964 7.9e-06 56.6 58 53.4


User provided reference genes

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