Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 4.9e-249 864.0 430 100.0
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.2e-242 842.8 430 97.4
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 3.1e-235 818.1 430 94.4
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 2.8e-220 768.5 430 85.8
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.1e-203 713.4 431 80.3
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.2e-199 699.9 429 79.0
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 2.7e-199 698.7 431 79.1
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 7.9e-199 697.2 430 78.6
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 2.3e-198 695.7 431 79.1
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.9e-197 692.6 431 78.7
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.5e-197 692.2 433 77.8
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.2e-196 689.1 431 77.5
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 2.8e-196 688.7 430 77.4
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 3.1e-195 685.3 430 78.8
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.6e-194 682.2 427 78.0
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.3e-193 679.9 434 75.6
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.2e-191 673.3 430 76.7
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.6e-191 672.9 422 78.0
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 6.1e-191 671.0 461 72.2
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 2.3e-190 669.1 430 75.3
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 6.7e-190 667.5 431 75.4
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 8.8e-190 667.2 430 75.1
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 4.3e-189 664.8 430 74.9
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 4.3e-189 664.8 424 75.9
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 3.7e-188 661.8 422 75.8
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 2.4e-187 659.1 433 75.8
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 5.3e-187 657.9 432 75.7
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.2e-186 656.8 426 74.2
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 2.0e-186 656.0 430 74.0
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 4.5e-186 654.8 426 74.2
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 4.5e-186 654.8 430 75.6
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 4.5e-186 654.8 430 75.1
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 5.9e-186 654.4 424 75.0
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.0e-185 653.7 433 73.2
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 1.9e-184 649.4 444 72.7
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 4.2e-184 648.3 430 74.2
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 9.4e-184 647.1 430 75.8
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.2e-183 646.7 433 72.5
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.2e-183 646.7 430 74.2
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.6e-183 646.4 430 72.1
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 2.1e-183 646.0 421 75.5
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 6.1e-183 644.4 430 73.7
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 6.1e-183 644.4 430 73.7
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.4e-182 643.3 432 73.6
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.8e-182 642.9 433 71.1
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 8.8e-182 640.6 421 73.6
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.0e-181 639.4 433 70.4
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 7.4e-181 637.5 430 73.7
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.3e-180 636.7 417 75.1
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.2e-180 636.0 429 72.0
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 1.4e-179 633.3 433 70.9
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 3.1e-179 632.1 433 70.7
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.5e-178 629.8 423 72.3
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 8.5e-177 624.0 423 72.1
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.4e-176 623.2 429 68.8
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 3.2e-176 622.1 430 71.2
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 4.2e-176 621.7 451 69.2
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 5.5e-176 621.3 423 71.6
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 7.2e-176 620.9 422 71.3
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.2e-175 620.2 423 71.4
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 2.1e-175 619.4 423 71.6
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 3.6e-175 618.6 422 72.7
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 6.7e-174 614.4 422 70.9
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 8.8e-174 614.0 421 72.0
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 8.8e-174 614.0 446 68.2
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.1e-173 613.6 422 72.3
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.5e-173 613.2 427 72.4
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 4.4e-173 611.7 423 71.9
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 7.4e-173 610.9 427 72.4
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 7.4e-173 610.9 422 70.4
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 9.7e-173 610.5 427 72.4
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 9.7e-173 610.5 427 72.4
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.3e-172 610.1 426 71.6
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.2e-172 609.4 422 70.4
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 2.2e-172 609.4 469 64.2
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 6.3e-172 607.8 423 71.9
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 6.3e-172 607.8 427 72.4
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 8.2e-172 607.4 422 71.8
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.1e-171 607.1 422 72.0
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.1e-171 607.1 427 71.7
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.4e-171 605.9 423 69.7
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.1e-171 605.5 422 72.0
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 3.5e-170 602.1 428 68.0
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 3.5e-170 602.1 428 68.0
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.0e-169 600.5 536 59.7
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.9e-169 599.0 435 68.0
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.9e-168 596.3 435 68.3
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.9e-168 596.3 427 68.4
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 1.9e-168 596.3 423 66.7
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.4e-166 590.1 422 66.6
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.8e-166 589.7 422 68.0
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 6.7e-166 587.8 422 67.1
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 4.8e-164 581.6 419 69.2
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.7e-162 575.9 423 65.7
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 3.8e-161 572.0 423 65.7
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 2.5e-160 569.3 423 67.1
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.2e-160 568.9 423 65.0
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 1.6e-159 566.6 434 69.1
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 2.0e-157 559.7 421 66.5
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 2.4e-155 552.7 429 61.1
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.1e-152 543.9 418 64.4
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 6.1e-151 538.1 426 63.1
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 5.4e-147 525.0 337 76.0
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 8.9e-142 507.7 358 67.0
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 5.8e-141 505.0 424 59.0
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.7e-140 503.4 430 57.7
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 3.7e-140 502.3 435 59.1
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.2e-133 480.7 433 58.9
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.1e-131 474.2 425 55.1
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 3.0e-129 466.1 426 53.1
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 2.3e-126 456.4 356 64.9
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 3.1e-126 456.1 298 73.8
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 2.6e-125 453.0 273 79.5
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 2.8e-119 433.0 429 49.4
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 1.1e-115 421.0 267 76.4
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 4.2e-115 419.1 422 55.2
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 3.0e-89 333.2 197 82.2
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 4.3e-80 302.8 417 43.4
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 1.9e-75 287.3 236 57.2
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 7.4e-72 275.4 294 52.4
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 1.2e-66 258.1 186 67.2
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 6.1e-50 202.6 140 72.1
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 3.7e-31 140.2 91 70.3
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.7e-31 140.2 89 70.8
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 3.9e-28 130.2 88 70.5
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 5.2e-25 119.8 87 65.5
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 6.4e-15 86.3 370 26.5
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 1.6e-10 71.6 92 44.6
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 1.7e-07 61.6 41 63.4


User provided reference genes

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