Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 3.8e-154 548.1 273 100.0
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 4.5e-147 524.6 268 95.1
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 2.2e-125 452.6 257 87.9
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 3.0e-119 432.2 220 96.4
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 8.2e-109 397.5 255 77.6
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 8.2e-109 397.5 251 78.9
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 9.1e-108 394.0 258 76.7
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.2e-106 389.4 262 74.4
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 5.0e-106 388.3 257 76.3
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 8.5e-106 387.5 251 74.1
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.1e-105 387.1 257 73.5
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.9e-105 386.3 252 75.4
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 3.2e-105 385.6 255 75.3
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 9.4e-105 384.0 251 76.5
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 9.4e-105 384.0 258 76.4
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.2e-104 383.6 248 75.0
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 2.7e-104 382.5 250 76.0
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 3.6e-104 382.1 250 75.6
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 6.1e-104 381.3 249 75.9
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 8.0e-104 380.9 255 76.5
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.0e-104 380.9 255 76.5
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.0e-103 380.6 259 74.1
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 3.0e-103 379.0 260 74.6
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.9e-103 378.6 251 75.7
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 6.7e-103 377.9 278 70.9
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.1e-102 377.1 254 73.6
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.1e-102 377.1 255 72.5
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.5e-102 376.7 268 70.5
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.5e-102 376.7 261 72.0
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.0e-102 376.3 249 73.5
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 2.0e-102 376.3 250 74.8
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 2.6e-102 375.9 256 72.7
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 2.6e-102 375.9 257 75.5
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 3.3e-102 375.6 252 75.4
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 7.4e-102 374.4 250 72.4
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.3e-101 373.6 256 71.5
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.7e-101 373.2 260 71.2
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 2.8e-101 372.5 251 73.3
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.8e-100 369.8 230 77.8
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 5.3e-100 368.2 251 72.5
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 9.1e-100 367.5 249 74.7
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 2.0e-99 366.3 253 71.1
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 7.7e-99 364.4 278 68.3
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.0e-98 364.0 251 72.9
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 1.0e-98 364.0 250 71.6
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.7e-98 363.2 254 70.1
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.7e-98 363.2 247 73.7
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 2.2e-98 362.8 260 70.4
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 2.2e-98 362.8 222 79.7
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.2e-98 362.8 249 70.3
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 2.2e-98 362.8 250 71.2
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 5.0e-98 361.7 251 71.3
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 6.5e-98 361.3 260 68.5
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 8.5e-98 360.9 250 72.8
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.9e-97 359.8 276 67.8
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 4.2e-97 358.6 248 70.6
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 2.1e-96 356.3 242 71.5
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 2.7e-96 355.9 259 68.3
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 3.6e-96 355.5 248 74.2
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.8e-95 353.2 255 67.8
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.8e-95 353.2 253 68.8
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.8e-95 353.2 251 68.9
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 2.3e-95 352.8 229 74.2
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 3.0e-95 352.4 248 70.6
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 4.0e-95 352.1 255 67.8
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 4.0e-95 352.1 249 69.5
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 5.2e-95 351.7 253 68.8
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 8.8e-95 350.9 258 67.8
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 2.6e-94 349.4 253 71.1
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 4.4e-94 348.6 261 66.7
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 7.5e-94 347.8 255 67.1
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 9.7e-94 347.4 257 67.3
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 2.2e-93 346.3 266 66.2
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 2.2e-93 346.3 257 67.3
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 4.8e-93 345.1 248 70.2
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 6.3e-93 344.7 255 67.5
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 6.3e-93 344.7 248 70.2
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 8.3e-93 344.4 255 67.5
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 2.4e-92 342.8 268 64.9
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 3.1e-92 342.4 239 71.1
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 4.1e-92 342.0 213 77.5
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 7.0e-92 341.3 285 61.4
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 7.0e-92 341.3 285 61.4
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.7e-91 339.3 234 70.5
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 7.7e-91 337.8 213 77.9
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 2.9e-90 335.9 253 67.2
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 3.8e-90 335.5 209 77.5
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 2.5e-89 332.8 232 68.1
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 3.2e-89 332.4 271 63.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 9.4e-89 330.9 332 55.1
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.2e-88 330.5 265 63.8
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.2e-88 330.5 272 63.2
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 8.0e-88 327.8 252 68.3
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.4e-87 327.0 211 75.8
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.5e-86 323.6 317 54.9
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.4e-84 317.0 215 73.5
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 5.9e-83 311.6 211 73.5
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 2.9e-82 309.3 209 70.8
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.1e-81 307.4 201 74.6
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 8.9e-79 297.7 200 75.5
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.9e-73 280.0 350 48.0
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 4.7e-72 275.4 226 62.4
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 1.8e-71 273.5 198 66.2
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 4.7e-64 248.8 242 52.9
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 6.2e-64 248.4 175 72.6
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 3.1e-63 246.1 239 54.0
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 4.0e-63 245.7 168 75.0
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.5e-57 227.3 225 52.9
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 4.3e-57 225.7 154 72.1
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 4.7e-56 222.2 245 49.8
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.2e-48 197.6 147 68.0
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.6e-48 196.1 137 69.3
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 7.1e-44 181.8 118 72.9
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.2e-43 181.0 148 62.2
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.7e-42 177.2 143 62.9
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 8.7e-42 174.9 143 62.2
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 3.1e-39 166.4 175 52.0
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 4.0e-39 166.0 115 73.0
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 1.0e-34 151.4 126 61.9
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.5e-33 146.7 96 74.0
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 1.1e-31 141.4 95 74.7
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 3.8e-29 132.9 79 77.2
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 3.0e-26 123.2 81 69.1
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 6.5e-21 105.5 113 52.2
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 4.3e-17 92.8 47 83.0
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.3e-13 81.3 179 30.2
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 3.0e-10 70.1 114 41.2
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 3.9e-10 69.7 114 41.2


User provided reference genes

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